Homologs of Dshi_0454 from Dinoroseobacter shibae DFL-12

coenzyme PQQ biosynthesis protein E (RefSeq)
SEED: Coenzyme PQQ synthesis protein E
KEGG: pyrroloquinoline quinone biosynthesis protein E

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_0454 coenzyme PQQ biosynthesis protein E (RefSeq) insig. 100 100
o Sinorhizobium meliloti 1021 SM_b20208 pyrroloquinoline quinone biosynthesis protein PqqE insig. 63 96
o Xanthobacter sp. DMC5 GFF3708 PqqA peptide cyclase strong 57 98
o Azospirillum brasilense Sp245 AZOBR_RS07530 pyrroloquinoline quinone biosynthesis protein PqqE strong 54 96
o Azospirillum sp. SherDot2 MPMX19_05110 PqqA peptide cyclase insig. 55 95
o Rhodopseudomonas palustris CGA009 TX73_010055 pyrroloquinoline quinone biosynthesis protein PqqE insig. 55 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05940 pyrroloquinoline quinone biosynthesis protein PqqE cofit 53 91
o Pantoea sp. MT58 IAI47_10205 pyrroloquinoline quinone biosynthesis protein PqqE insig. 52 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1485.1 Coenzyme PQQ synthesis protein E insig. 52 96
o Klebsiella pneumoniae MKP103 KDGMDA_22545 pyrroloquinoline quinone biosynthesis protein PqqE insig. 51 90
o Rahnella sp. WP5 EX31_RS00655 pyrroloquinoline quinone biosynthesis protein PqqE insig. 50 91
o Pseudomonas fluorescens FW300-N2C3 AO356_14200 pyrroloquinoline quinone biosynthesis protein PqqE sig. 50 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4772 Coenzyme PQQ synthesis protein E strong 49 96
o Pseudomonas fluorescens SBW25 PFLU_RS27585 pyrroloquinoline quinone biosynthesis protein PqqE insig. 49 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27585 pyrroloquinoline quinone biosynthesis protein PqqE insig. 49 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1165 Coenzyme PQQ synthesis protein E insig. 49 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1947 Coenzyme PQQ synthesis protein E insig. 50 93
o Pseudomonas simiae WCS417 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE strong 49 97
o Pseudomonas fluorescens FW300-N2E3 AO353_07450 pyrroloquinoline quinone biosynthesis protein PqqE insig. 49 96
o Erwinia amylovora T8 OLJFJH_02120 pyrroloquinoline quinone biosynthesis protein PqqE insig. 50 91
  Pseudomonas fluorescens FW300-N2C3 AO356_30425 pyrroloquinoline quinone biosynthesis protein PqqE insig. 50 93
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05309 PqqA peptide cyclase cofit 49 96
o Pseudomonas sp. RS175 PFR28_04090 PqqA peptide cyclase cofit 49 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2499 Coenzyme PQQ synthesis protein E cofit 49 96
  Pseudomonas fluorescens FW300-N2E3 AO353_22410 pyrroloquinoline quinone biosynthesis protein PqqE insig. 50 93
o Pseudomonas sp. DMC3 GFF62 PqqA peptide cyclase cofit 49 93
o Pseudomonas orientalis W4I3 QF045_RS00340 pyrroloquinoline quinone biosynthesis protein PqqE insig. 49 94
o Alteromonas macleodii MIT1002 MIT1002_03289 Antilisterial bacteriocin subtilosin biosynthesis protein AlbA strong 48 96
o Pseudomonas aeruginosa MRSN321 DY961_RS16130 pqqE;go_process=peptide pyrroloquinoline quinone biosynthesis protein PqqE sig. 52 90
o Pseudomonas aeruginosa PA14 IKLFDK_09720 pyrroloquinoline quinone biosynthesis protein PqqE insig. 52 90
o Pseudomonas aeruginosa PUPa3 DQ20_RS38450 pqqE;go_process=peptide pyrroloquinoline quinone biosynthesis protein PqqE sig. 52 90
o Pseudomonas syringae pv. syringae B728a Psyr_4674 Radical SAM insig. 49 92
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4674 Radical SAM insig. 49 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3513 Coenzyme PQQ synthesis protein E sig. 50 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4505 Coenzyme PQQ synthesis protein E insig. 49 93
o Pseudomonas putida KT2440 PP_0376 Coenzyme PQQ synthesis protein E strong 49 95
o Pseudomonas sp. SVBP6 COO64_RS22660 pqqE pyrroloquinoline quinone biosynthesis protein PqqE insig. 48 96
o Acinetobacter baumannii LAC-4 RR41_RS13060 pyrroloquinoline quinone biosynthesis protein PqqE insig. 46 99
o Cupriavidus basilensis FW507-4G11 RR42_RS11475 pyrroloquinoline quinone biosynthesis protein PqqE sig. 51 95
o Pseudomonas stutzeri RCH2 Psest_2270 coenzyme PQQ biosynthesis protein E strong 46 97
o Pseudomonas sp. BP01 JOY50_RS17995 pqqE pyrroloquinoline quinone biosynthesis protein PqqE insig. 49 93
o Marinobacter adhaerens HP15 HP15_3137 pyrroloquinoline quinone biosynthesis protein PqqE strong 47 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS32675 pyrroloquinoline quinone biosynthesis protein PqqE insig. 52 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS15960 pyrroloquinoline quinone biosynthesis protein PqqE insig. 51 90
o Paraburkholderia graminis OAS925 ABIE53_005479 pyrroloquinoline quinone biosynthesis protein E sig. 50 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01333 pyrroloquinoline quinone biosynthesis protein E insig. 50 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5407 Coenzyme PQQ synthesis protein E cofit 47 99
o Methylophilus sp. DMC18 GFF671 PqqA peptide cyclase insig. 47 90
  Pseudomonas stutzeri RCH2 Psest_2279 coenzyme PQQ biosynthesis protein E insig. 47 90
o Variovorax sp. OAS795 ABID97_RS12735 pyrroloquinoline quinone biosynthesis protein PqqE insig. 50 90
  Ralstonia solanacearum PSI07 RPSI07_RS16210 GDL motif peptide-associated radical SAM/SPASM maturase insig. 28 92
  Ralstonia solanacearum GMI1000 RS_RS08730 GDL motif peptide-associated radical SAM/SPASM maturase insig. 27 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01265 GDL motif peptide-associated radical SAM/SPASM maturase insig. 27 92
  Ralstonia solanacearum UW163 UW163_RS14575 GDL motif peptide-associated radical SAM/SPASM maturase insig. 27 92
  Desulfovibrio vulgaris Hildenborough JW710 DVU0855 radical SAM domain protein (TIGR) no data 24 90
  Pseudomonas fluorescens FW300-N2E3 AO353_27515 radical SAM protein insig. 27 92
  Pseudomonas sp. RS175 PFR28_02238 Putative mycofactocin radical SAM maturase MftC insig. 31 57
  Pseudomonas fluorescens FW300-N2C3 AO356_25035 heme d1 biosynthesis radical SAM protein NirJ insig. 30 57
  Pseudomonas fluorescens FW300-N2E3 AO353_21930 heme d1 biosynthesis radical SAM protein NirJ insig. 27 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_697 Heme d1 biosynthesis protein NirJ insig. 30 56
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4237 COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like insig. 26 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5772 Heme d1 biosynthesis protein NirJ strong 27 73
  Desulfovibrio vulgaris Miyazaki F DvMF_2901 Radical SAM domain protein (RefSeq) no data 24 90
  Desulfovibrio vulgaris Hildenborough JW710 DVU0857 nirJ-1 radical SAM domain protein (TIGR) no data 24 86
  Mycobacterium tuberculosis H37Rv Rv0693 Probable coenzyme PQQ synthesis protein E PqqE (coenzyme PQQ synthesis protein III) insig. 26 96
  Pseudomonas stutzeri RCH2 Psest_0811 heme d1 biosynthesis radical SAM protein NirJ strong 27 89
  Magnetospirillum magneticum AMB-1 AMB_RS07120 heme d1 biosynthesis radical SAM protein NirJ cofit 26 90
  Desulfovibrio vulgaris Miyazaki F DvMF_2903 Radical SAM domain protein (RefSeq) no data 23 87
  Pseudomonas sp. SVBP6 COO64_RS14070 nirJ heme d1 biosynthesis radical SAM protein NirJ insig. 29 56
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03458 PqqA peptide cyclase cofit 25 90
  Rhodopseudomonas palustris CGA009 TX73_020720 radical SAM protein insig. 25 88
  Dechlorosoma suillum PS Dsui_3126 heme d1 biosynthesis radical SAM protein NirJ strong 24 90
  Dinoroseobacter shibae DFL-12 Dshi_3173 Radical SAM domain protein (RefSeq) insig. 23 89
  Dickeya dadantii 3937 DDA3937_RS08375 radical SAM protein insig. 22 85
  Pseudomonas aeruginosa MRSN321 DY961_RS22565 nirJ;go_function=4 heme d1 biosynthesis radical SAM protein NirJ insig. 23 91
  Pseudomonas aeruginosa PA14 IKLFDK_22880 heme d1 biosynthesis radical SAM protein NirJ insig. 23 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS36770 nirJ;go_function=4 heme d1 biosynthesis radical SAM protein NirJ insig. 23 91
  Methanococcus maripaludis JJ MMJJ_RS02055 GTP 3',8-cyclase MoaA strong 22 67
  Methanococcus maripaludis S2 MMP_RS03015 GTP 3' 8-cyclase MoaA strong 22 67
  Magnetospirillum magneticum AMB-1 AMB_RS15065 radical SAM protein cofit 25 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0956 Predicted Fe-S oxidoreductases insig. 25 77
  Azospirillum sp. SherDot2 MPMX19_06590 PqqA peptide cyclase insig. 27 76
  Phocaeicola dorei CL03T12C01 ABI39_RS06970 TIGR04133 family radical SAM/SPASM protein insig. 21 88
  Xanthobacter sp. DMC5 GFF1197 PqqA peptide cyclase insig. 24 81
  Methanococcus maripaludis JJ MMJJ_RS03485 radical SAM protein insig. 28 43
  Bacteroides thetaiotaomicron VPI-5482 BT0510 putative heme biosynthesis protein (NCBI ptt file) insig. 23 81
  Synechococcus elongatus PCC 7942 Synpcc7942_1282 moaA molybdenum cofactor biosynthesis protein A cofit 35 39
  Rhodospirillum rubrum S1H Rru_A0479 Radical SAM (NCBI) insig. 22 90
  Rhodospirillum rubrum S1H Rru_A0761 Radical SAM (NCBI) insig. 32 33
  Xanthobacter sp. DMC5 GFF2380 GTP 3',8-cyclase strong 29 43
  Methanococcus maripaludis S2 MMP_RS02000 radical SAM protein insig. 27 43
  Magnetospirillum magneticum AMB-1 AMB_RS11590 radical SAM protein cofit 23 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4170 molybdenum cofactor biosynthesis protein A, bacterial insig. 31 41
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03475 radical SAM protein insig. 25 70
  Methanococcus maripaludis S2 MMP_RS05615 radical SAM protein insig. 27 31
  Rhodospirillum rubrum S1H Rru_A0763 Radical SAM (NCBI) insig. 30 47
  Desulfovibrio vulgaris Hildenborough JW710 DVU3018 radical SAM domain protein (TIGR) insig. 29 43
  Lysobacter sp. OAE881 ABIE51_RS14055 GTP 3',8-cyclase MoaA strong 30 38
  Herbaspirillum seropedicae SmR1 HSERO_RS18185 molybdenum cofactor biosynthesis protein MoaA insig. 31 44
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15835 radical SAM protein strong 24 67