Homologs of deaD from Desulfovibrio vulgaris Hildenborough JW710

deaD: ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR)
SEED: Superfamily II DNA and RNA helicases
KEGG: ATP-dependent RNA helicase DeaD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU3088 deaD ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) sig. 100 100
  Desulfovibrio vulgaris Miyazaki F DvMF_2252 DEAD/DEAH box helicase domain protein (RefSeq) strong 81 78
  Desulfovibrio vulgaris Miyazaki F DvMF_2125 DEAD/DEAH box helicase domain protein (RefSeq) no data 40 72
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05910 RNA helicase strong 38 69
  Desulfovibrio vulgaris Hildenborough JW710 DVU3310 deaD ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) strong 44 64
  Dechlorosoma suillum PS Dsui_1351 DNA/RNA helicase, superfamily II strong 42 64
  Escherichia coli ECRC99 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD no data 44 64
  Escherichia coli ECRC101 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD sig. 44 64
  Escherichia coli ECRC101 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD sig. 44 64
  Escherichia coli ECRC102 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD insig. 44 64
  Escherichia coli ECRC98 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD no data 44 64
  Escherichia coli ECOR27 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD no data 44 64
  Escherichia coli ECOR38 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD strong 44 64
  Enterobacter sp. TBS_079 MPMX20_04066 ATP-dependent RNA helicase DeaD insig. 43 64
  Escherichia coli BL21 ECD_03029 ATP-dependent RNA helicase sig. 43 64
  Escherichia fergusonii Becca EFB2_00661 ATP-dependent RNA helicase DeaD sig. 43 64
  Escherichia coli ECRC62 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD sig. 43 64
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00538 ATP-dependent RNA helicase DeaD cofit 43 64
  Escherichia coli Nissle 1917 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD cofit 43 64
  Escherichia coli BW25113 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) strong 43 64
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) insig. 40 69
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) strong 43 64
  Methanococcus maripaludis JJ MMJJ_RS02855 DEAD/DEAH box helicase strong 39 64
  Methanococcus maripaludis S2 MMP_RS02420 DEAD/DEAH box helicase no data 39 64
  Klebsiella michiganensis M5al BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase no data 44 64
  Vibrio cholerae E7946 ATCC 55056 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase insig. 39 78
  Enterobacter asburiae PDN3 EX28DRAFT_3211 Superfamily II DNA and RNA helicases no data 42 63
  Pectobacterium carotovorum WPP14 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase insig. 38 76
  Shewanella loihica PV-4 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 38 79
  Rhodanobacter sp. FW510-T8 OKGIIK_09705 ATP-dependent RNA helicase cofit 40 77
  Serratia liquefaciens MT49 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase cofit 41 67
  Rahnella sp. WP5 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase insig. 41 67
  Pantoea sp. MT58 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase strong 41 67
  Pseudomonas stutzeri RCH2 Psest_1804 Superfamily II DNA and RNA helicases strong 42 62
  Alteromonas macleodii MIT1002 MIT1002_00666 Cold-shock DEAD box protein A strong 40 64
  Shewanella amazonensis SB2B Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) strong 41 63
  Pseudomonas sp. S08-1 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) cofit 40 71
  Dickeya dadantii 3937 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase insig. 38 76
  Rhodanobacter denitrificans MT42 LRK55_RS02405 DEAD/DEAH box helicase cofit 37 84
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02650 DEAD/DEAH box helicase insig. 37 84
  Fusobacterium nucleatum SB010 HUW76_10100 DEAD/DEAH box helicase strong 35 74
  Kangiella aquimarina DSM 16071 B158DRAFT_1850 ATP-dependent RNA helicase CsdA (EC 5.99.1.-) insig. 39 64
  Dickeya dianthicola 67-19 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase insig. 42 64
  Dickeya dianthicola ME23 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase no data 42 64
  Kangiella aquimarina DSM 16071 B158DRAFT_2047 ATP-dependent RNA helicase DbpA (EC 5.99.1.-) insig. 41 63
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08990 DEAD/DEAH box helicase strong 39 74
  Castellaniella sp019104865 MT123 ABCV34_RS04635 ATP-dependent RNA helicase DbpA insig. 40 69
  Erwinia tracheiphila SCR3 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase no data 38 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5449 ATP-dependent 23S rRNA helicase DbpA insig. 44 60
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 39 61
  Pseudomonas stutzeri RCH2 Psest_0344 Superfamily II DNA and RNA helicases insig. 46 56
  Lysobacter sp. OAE881 ABIE51_RS12265 DEAD/DEAH box helicase insig. 39 67
  Shewanella sp. ANA-3 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 37 75
  Bacteroides thetaiotaomicron VPI-5482 BT3303 ATP-dependent RNA helicase (NCBI ptt file) sig. 39 61
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 39 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 41 64
  Pseudomonas fluorescens FW300-N2E3 AO353_19130 RNA helicase no data 41 64
  Shewanella loihica PV-4 Shew_0598 ATP-dependent RNA helicase DbpA (RefSeq) insig. 42 60
  Shewanella sp. ANA-3 Shewana3_3384 ATP-dependent RNA helicase DbpA (RefSeq) insig. 39 64
  Pseudomonas sp. RS175 PFR28_04172 ATP-dependent RNA helicase DbpA sig. 45 56
  Bacteroides ovatus ATCC 8483 BACOVA_00904 DEAD/DEAH box helicase insig. 38 61
  Pseudomonas fluorescens FW300-N2C3 AO356_13770 ATP-dependent RNA helicase strong 45 56
  Pseudomonas syringae pv. syringae B728a Psyr_0516 ATP-dependent RNA helicase DbpA insig. 44 56
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0516 ATP-dependent RNA helicase DbpA insig. 44 56
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 39 61
  Klebsiella michiganensis M5al BWI76_RS12705 ATP-dependent RNA helicase insig. 39 68
  Shewanella oneidensis MR-1 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) strong 36 79
  Lysobacter sp. OAE881 ABIE51_RS14930 ATP-dependent RNA helicase DbpA insig. 43 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4673 ATP-dependent 23S rRNA helicase DbpA strong 45 56
  Dechlorosoma suillum PS Dsui_2946 DNA/RNA helicase, superfamily II insig. 44 59
  Cupriavidus basilensis FW507-4G11 RR42_RS00295 DEAD/DEAH box helicase sig. 45 57
  Pseudomonas fluorescens SBW25 PFLU_RS08490 DEAD/DEAH box helicase no data 40 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08490 DEAD/DEAH box helicase strong 40 64
  Pseudomonas fluorescens FW300-N2C3 AO356_03110 RNA helicase no data 40 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 40 64
  Mycobacterium tuberculosis H37Rv Rv1253 Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog) insig. 40 68
  Pseudomonas syringae pv. syringae B728a Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal no data 40 64
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal no data 40 64
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 39 60
  Escherichia coli BL21 ECD_01320 ATP-dependent RNA helicase, specific for 23S rRNA insig. 39 64
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02338 ATP-dependent RNA helicase DbpA insig. 39 64
  Escherichia coli BW25113 b1343 dbpA ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) insig. 39 64
  Pseudomonas putida KT2440 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD no data 35 82
  Marinobacter adhaerens HP15 HP15_588 DEAD/DEAH box helicase domain protein sig. 40 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2247 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) no data 40 64
  Escherichia coli ECOR38 HEPCGN_26000 dbpA ATP-dependent RNA helicase DbpA insig. 39 64
  Escherichia coli Nissle 1917 ECOLIN_RS08060 ATP-dependent RNA helicase DbpA no data 39 64
  Variovorax sp. OAS795 ABID97_RS02340 ATP-dependent RNA helicase DbpA insig. 43 57
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12600 DEAD/DEAH box helicase sig. 41 60
  Escherichia coli ECRC101 OKFHMN_02160 dbpA ATP-dependent RNA helicase DbpA insig. 39 64
  Escherichia coli ECRC101 MCAODC_16095 dbpA ATP-dependent RNA helicase DbpA insig. 39 64
  Escherichia coli ECRC102 NIAGMN_26330 dbpA ATP-dependent RNA helicase DbpA insig. 39 64
  Escherichia coli ECRC98 JDDGAC_04720 dbpA ATP-dependent RNA helicase DbpA no data 39 64
  Escherichia coli ECRC99 KEDOAH_26595 dbpA ATP-dependent RNA helicase DbpA no data 39 64
  Pseudomonas putida KT2440 PP_4952 ATP-dependent RNA helicase, specific for 23S rRNA insig. 44 56
  Erwinia tracheiphila SCR3 LU632_RS11995 dbpA ATP-dependent RNA helicase DbpA insig. 43 56
  Pseudomonas sp. RS175 PFR28_00980 ATP-dependent RNA helicase DeaD insig. 40 61
  Shewanella amazonensis SB2B Sama_0752 ATP-dependent RNA helicase DbpA (RefSeq) insig. 39 64
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 39 58
  Pseudomonas fluorescens FW300-N2E3 AO353_07850 ATP-dependent RNA helicase strong 44 56