Conservation of cofitness between Xcc-8004.2326.1 and Xcc-8004.2323.1 in Xanthomonas campestris pv. campestris strain 8004

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 1.0 Xcc-8004.2323.1 Argininosuccinate lyase (EC 4.3.2.1) 0.73 3
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS02375 glutamate 5-kinase 0.70 LRK54_RS02380 argininosuccinate lyase low > 59
Rhodanobacter denitrificans MT42 0.59 LRK55_RS02130 glutamate 5-kinase 0.70 LRK55_RS02135 argininosuccinate lyase low > 63
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_09420 proB glutamate 5-kinase 0.70 OKGIIK_09430 argH argininosuccinate lyase low > 52
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS08685 glutamate 5-kinase 0.67 ABZR86_RS08695 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.84 43
Lysobacter sp. OAE881 0.53 ABIE51_RS13370 glutamate 5-kinase 0.69 ABIE51_RS13380 argininosuccinate lyase 0.83 19
Alteromonas macleodii MIT1002 0.42 MIT1002_04056 Glutamate 5-kinase 0.20 MIT1002_00467 Argininosuccinate lyase low > 70
Shewanella amazonensis SB2B 0.38 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.20 Sama_0260 argininosuccinate lyase (RefSeq) 0.93 33
Shewanella loihica PV-4 0.36 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.21 Shew_0206 argininosuccinate lyase (RefSeq) 0.98 17
Serratia liquefaciens MT49 0.36 IAI46_04430 glutamate 5-kinase 0.22 IAI46_24500 argininosuccinate lyase 0.66 61
Rahnella sp. WP5 0.36 EX31_RS20980 glutamate 5-kinase 0.21 EX31_RS14180 argininosuccinate lyase 0.97 8
Shewanella sp. ANA-3 0.36 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.20 Shewana3_3901 argininosuccinate lyase (RefSeq) 0.89 58
Escherichia coli ECOR38 0.36 HEPCGN_07780 proB Glutamate 5-kinase 0.22 HEPCGN_12220 argH argininosuccinate lyase 0.95 17
Escherichia coli Nissle 1917 0.36 ECOLIN_RS01825 glutamate 5-kinase 0.22 ECOLIN_RS22855 argininosuccinate lyase 0.95 1
Escherichia coli ECRC101 0.36 MCAODC_00195 proB Glutamate 5-kinase 0.22 MCAODC_04075 argH argininosuccinate lyase 0.81 50
Escherichia fergusonii Becca 0.36 EFB2_03778 Glutamate 5-kinase 0.22 EFB2_04654 Argininosuccinate lyase low > 86
Klebsiella michiganensis M5al 0.36 BWI76_RS05840 glutamate 5-kinase 0.22 BWI76_RS00855 argininosuccinate lyase 0.90 7
Escherichia coli ECRC98 0.36 JDDGAC_13300 proB Glutamate 5-kinase 0.22 JDDGAC_17200 argH argininosuccinate lyase 0.91 3
Shewanella oneidensis MR-1 0.36 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.19 SO0279 argH argininosuccinate lyase (NCBI ptt file) 0.96 24
Escherichia coli ECRC99 0.36 KEDOAH_18480 proB Glutamate 5-kinase 0.22 KEDOAH_14585 argH argininosuccinate lyase — —
Escherichia coli ECRC100 0.36 OKFHMN_09675 proB Glutamate 5-kinase 0.22 OKFHMN_13575 argH argininosuccinate lyase 0.95 34
Escherichia coli ECOR27 0.36 NOLOHH_02050 proB Glutamate 5-kinase 0.22 NOLOHH_05720 argH argininosuccinate lyase 0.98 3
Escherichia coli ECRC102 0.36 NIAGMN_07535 proB Glutamate 5-kinase 0.22 NIAGMN_11325 argH argininosuccinate lyase — —
Escherichia coli BW25113 0.36 b0242 proB gamma-glutamyl kinase (NCBI) 0.22 b3960 argH argininosuccinate lyase (NCBI) 0.91 22
Escherichia coli ECRC62 0.36 BNILDI_00245 proB Glutamate 5-kinase 0.22 BNILDI_05805 argH argininosuccinate lyase 0.98 7
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_03398 Glutamate 5-kinase 0.22 OHPLBJKB_04090 Argininosuccinate lyase low > 73
Escherichia coli BL21 0.36 ECD_00239 gamma-glutamate kinase 0.22 ECD_03845 argininosuccinate lyase 0.86 27
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2651 glutamate 5-kinase 0.21 EX28DRAFT_4422 argininosuccinate lyase 0.88 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.22 GFF2346 Argininosuccinate lyase (EC 4.3.2.1) low > 78
Pantoea sp. MT58 0.35 IAI47_15120 glutamate 5-kinase 0.21 IAI47_00920 argininosuccinate lyase 0.93 7
Enterobacter sp. TBS_079 0.35 MPMX20_00927 Glutamate 5-kinase 0.22 MPMX20_04520 Argininosuccinate lyase 0.92 21
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.22 Pf1N1B4_2183 Argininosuccinate lyase (EC 4.3.2.1) — —
Erwinia tracheiphila SCR3 0.35 LU632_RS01185 proB glutamate 5-kinase 0.21 LU632_RS19600 argH argininosuccinate lyase low > 74
Pseudomonas fluorescens SBW25 0.35 PFLU_RS25360 glutamate 5-kinase 0.22 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS25360 glutamate 5-kinase 0.22 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas simiae WCS417 0.34 PS417_23545 gamma-glutamyl kinase 0.22 PS417_27540 argininosuccinate lyase — —
Paraburkholderia graminis OAS925 0.34 ABIE53_003588 glutamate 5-kinase 0.22 ABIE53_001311 argininosuccinate lyase — —
Variovorax sp. OAS795 0.34 ABID97_RS23400 glutamate 5-kinase 0.21 ABID97_RS08190 argininosuccinate lyase — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_06264 glutamate 5-kinase 0.22 H281DRAFT_00194 argininosuccinate lyase 0.35 102
Pseudomonas putida KT2440 0.34 PP_0691 Glutamate 5-kinase 0.23 PP_0184 Argininosuccinate lyase 0.35 40
Dickeya dadantii 3937 0.34 DDA3937_RS16535 glutamate 5-kinase 0.20 DDA3937_RS20340 argininosuccinate lyase 0.65 61
Dickeya dianthicola 67-19 0.34 HGI48_RS16605 glutamate 5-kinase 0.19 HGI48_RS00885 argininosuccinate lyase low > 71
Dickeya dianthicola ME23 0.33 DZA65_RS17695 glutamate 5-kinase 0.19 DZA65_RS00945 argininosuccinate lyase 0.87 2
Pseudomonas sp. RS175 0.33 PFR28_03769 Glutamate 5-kinase 0.22 PFR28_04367 Argininosuccinate lyase — —
Dechlorosoma suillum PS 0.33 Dsui_0166 glutamate 5-kinase 0.22 Dsui_0111 argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.22 Pf6N2E2_4429 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_15815 gamma-glutamyl kinase 0.22 AO356_12780 argininosuccinate lyase 0.62 40
Pseudomonas sp. S08-1 0.33 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.22 OH686_13885 argininosuccinate lyase 0.84 2
Pectobacterium carotovorum WPP14 0.33 HER17_RS04700 glutamate 5-kinase 0.20 HER17_RS20620 argininosuccinate lyase 0.77 74
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.23 PfGW456L13_854 Argininosuccinate lyase (EC 4.3.2.1) 0.76 55
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_0704 glutamate 5-kinase 0.22 Psyr_0065 argininosuccinate lyase — —
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_0704 glutamate 5-kinase 0.22 Psyr_0065 argininosuccinate lyase — —
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_11575 glutamate 5-kinase 0.19 CSW01_13360 argininosuccinate lyase low > 62
Sinorhizobium meliloti 1021 0.33 SMc03776 gamma-glutamyl kinase 0.23 SMc00725 argininosuccinate lyase low > 103
Rhizobium sp. OAE497 0.33 ABIE40_RS18920 glutamate 5-kinase 0.22 ABIE40_RS17520 argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_14115 gamma-glutamyl kinase 0.22 AO353_09000 argininosuccinate lyase 0.73 35
Variovorax sp. SCN45 0.32 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.22 GFF3824 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas stutzeri RCH2 0.32 Psest_3384 glutamate 5-kinase 0.22 Psest_3751 argininosuccinate lyase — —
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_1377 gamma-glutamyl kinase (RefSeq) 0.23 DvMF_0048 argininosuccinate lyase (RefSeq) 0.96 8
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU0930 proB glutamate 5-kinase (TIGR) 0.22 DVU1094 argH argininosuccinate lyase (TIGR) 0.88 8
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.20 GFF736 Argininosuccinate lyase (EC 4.3.2.1) — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1467 glutamate 5-kinase (RefSeq) 0.20 Dshi_3062 argininosuccinate lyase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.30 TX73_000850 glutamate 5-kinase 0.22 TX73_024645 argininosuccinate lyase — —
Acinetobacter radioresistens SK82 0.30 MPMX26_02135 Glutamate 5-kinase 0.23 MPMX26_00185 Argininosuccinate lyase 0.80 6
Bosea sp. OAE506 0.30 ABIE41_RS07585 glutamate 5-kinase 0.20 ABIE41_RS08750 argininosuccinate lyase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c15510 glutamate 5-kinase ProB 0.22 PGA1_c03450 argininosuccinate lyase ArgH — —
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS16125 glutamate 5-kinase 0.21 A4249_RS12555 argininosuccinate lyase 0.99 12
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS22170 glutamate 5-kinase 0.33 ABZR88_RS12070 argininosuccinate lyase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.30 Echvi_3852 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.75 16
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.33 CA265_RS18485 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.92 23
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_07725 glutamate 5-kinase 0.34 CA264_06225 argininosuccinate lyase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.24 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.29 BT3733 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.69 56
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS08650 glutamate 5-kinase 0.31 HMPREF1058_RS09585 argininosuccinate lyase 0.71 62
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS10650 glutamate 5-kinase 0.32 HMPREF1078_RS11315 argininosuccinate lyase 0.98 17
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS02880 glutamate 5-kinase 0.31 ABI39_RS07095 argininosuccinate lyase 0.93 2
Bacteroides ovatus ATCC 8483 0.23 BACOVA_03537 glutamate 5-kinase 0.31 BACOVA_03551 argininosuccinate lyase 0.94 23
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS03325 glutamate 5-kinase 0.29 HMPREF1181_RS03410 argininosuccinate lyase 0.95 15

Not shown: 23 genomes with orthologs for Xcc-8004.2326.1 only; 1 genomes with orthologs for Xcc-8004.2323.1 only