| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_004290 | | cytochrome c oxidase subunit I | 1.0 | TX73_001410 | | ubiquinone biosynthesis hydroxylase | 0.85 | 11 |
| Agrobacterium fabrum C58 | 0.75 | Atu0768 | | cytochrome-c oxidase chain I | 0.51 | Atu2755 | | putative 2-octaprenyl-6-methoxyphenol | — | — |
| Rhizobium sp. OAE497 | 0.74 | ABIE40_RS04065 | | cytochrome c oxidase subunit I | 0.51 | ABIE40_RS18435 | | ubiquinone biosynthesis hydroxylase | — | — |
| Bosea sp. OAE506 | 0.74 | ABIE41_RS22950 | | cytochrome c oxidase subunit I | 0.53 | ABIE41_RS04770 | | ubiquinone biosynthesis hydroxylase | — | — |
| Sinorhizobium meliloti 1021 | 0.73 | SMc00010 | | cytochrome C oxidase polypeptide I transmembrane protein | 0.49 | SMc03804 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.71 | AMB_RS10960 | | cytochrome c oxidase subunit I | 0.36 | AMB_RS00070 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Azospirillum sp. SherDot2 | 0.70 | MPMX19_00885 | | Cytochrome c oxidase subunit 1 | 0.39 | MPMX19_05522 | | Ubiquinone hydroxylase UbiL | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.70 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 0.36 | CCNA_00106 | | 2-polyprenyl-6-methoxyphenol hydroxylase | — | — |
| Caulobacter crescentus NA1000 | 0.70 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 0.36 | CCNA_00106 | | 2-polyprenyl-6-methoxyphenol hydroxylase | — | — |
| Azospirillum brasilense Sp245 | 0.70 | AZOBR_RS10585 | | cytochrome C oxidase subunit I | 0.41 | AZOBR_RS02285 | | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.69 | A4249_RS00110 | | cytochrome c oxidase subunit I | 0.35 | A4249_RS13315 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.66 | Ga0059261_2008 | | cytochrome c oxidase, subunit I | 0.31 | Ga0059261_2172 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Phaeobacter inhibens DSM 17395 | 0.61 | PGA1_c06710 | | cytochrome c oxidase subunit 1-beta | 0.40 | PGA1_c33260 | | protein VisC-like protein | — | — |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS22360 | | cytochrome c oxidase subunit I | 0.21 | RPSI07_RS10685 | | ubiquinone biosynthesis hydroxylase UbiH | — | — |
| Ralstonia solanacearum GMI1000 | 0.59 | RS_RS01790 | | cytochrome c oxidase subunit I | 0.20 | RS_RS14495 | | ubiquinone biosynthesis hydroxylase UbiH | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS10950 | | cytochrome c oxidase subunit I | 0.20 | RALBFv3_RS06545 | | ubiquinone biosynthesis protein | — | — |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS02630 | | cytochrome c oxidase subunit I | 0.20 | UW163_RS07080 | | ubiquinone biosynthesis protein | — | — |
| Dinoroseobacter shibae DFL-12 | 0.59 | Dshi_2383 | | Cytochrome c oxidase subunit I type (RefSeq) | 0.39 | Dshi_0062 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family (RefSeq) | — | — |
| Ralstonia sp. UNC404CL21Col | 0.58 | ABZR87_RS06800 | | cytochrome c oxidase subunit I | 0.21 | ABZR87_RS02195 | | UbiH/UbiF family hydroxylase | — | — |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_000674 | | cytochrome c oxidase subunit 1 | 0.23 | ABIE53_003649 | | 2-octaprenylphenol hydroxylase | — | — |
| Burkholderia phytofirmans PsJN | 0.57 | BPHYT_RS02645 | | cytochrome oxidase subunit I | 0.23 | BPHYT_RS17435 | | ubiquinone biosynthesis hydroxylase UbiH | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.57 | H281DRAFT_01993 | | cytochrome c oxidase subunit 1 | 0.23 | H281DRAFT_05706 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS01500 | | cytochrome c oxidase subunit I | 0.21 | QEN71_RS27595 | | UbiH/UbiF family hydroxylase | — | — |
| Castellaniella sp019104865 MT123 | 0.56 | ABCV34_RS13270 | | cytochrome c oxidase subunit I | 0.17 | ABCV34_RS10260 | | FAD-dependent monooxygenase | — | — |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS12000 | | cytochrome c oxidase subunit I | 0.14 | ABID97_RS24790 | | FAD-dependent monooxygenase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS01880 | | cytochrome oxidase subunit I | 0.18 | RR42_RS18360 | | ubiquinone biosynthesis protein | — | — |
| Variovorax sp. SCN45 | 0.56 | GFF2298 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.15 | GFF2133 | | 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.55 | GFF689 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.15 | GFF625 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.29 | PFLU_RS28930 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.29 | PFLU_RS28930 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Marinobacter adhaerens HP15 | 0.55 | HP15_3772 | | cytochrome c oxidase, subunit I | 0.27 | HP15_3201 | | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | low | > 73 |
| Pseudomonas simiae WCS417 | 0.55 | PS417_00305 | | cytochrome oxidase subunit I | 0.29 | PS417_27270 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_3891 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.13 | Ac3H11_4879 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | low | > 79 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_10835 | | cytochrome oxidase subunit I | 0.29 | AO353_08750 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_4099 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.29 | Pf6N2E2_4482 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Pseudomonas sp. RS175 | 0.54 | PFR28_04690 | | Cytochrome c oxidase subunit 1 | 0.28 | PFR28_04319 | | 2-octaprenylphenol hydroxylase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_11165 | | cytochrome oxidase subunit I | 0.28 | AO356_13020 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Pseudomonas sp. S08-1 | 0.54 | OH686_12320 | | cytochrome c oxidase, subunit I | 0.28 | OH686_11190 | | 2-polyprenylphenol hydroxylase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.54 | HSERO_RS20785 | | cytochrome oxidase subunit I | 0.21 | HSERO_RS20960 | | oxygenase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.54 | Pf1N1B4_1854 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.28 | Pf1N1B4_2231 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_614 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.28 | PfGW456L13_899 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Pseudomonas stutzeri RCH2 | 0.54 | Psest_4327 | | cytochrome c oxidase, subunit I | 0.26 | Psest_0178 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Shewanella loihica PV-4 | 0.54 | Shew_0124 | | cytochrome-c oxidase (RefSeq) | 0.24 | Shew_3065 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq) | low | > 60 |
| Pseudomonas putida KT2440 | 0.53 | PP_0104 | | Cytochrome c oxidase subunit 1 | 0.27 | PP_5197 | | putative oxidoreductase involved in anerobic synthesis of ubiquinone, FAD/NAD(P)-binding domain | — | — |
| Shewanella oneidensis MR-1 | 0.53 | SO4607 | | cytochrome c oxidase, subunit I (NCBI ptt file) | 0.25 | SO0778 | | oxidoreductase, FAD-binding, UbiH/Coq6 family (NCBI ptt file) | — | — |
| Kangiella aquimarina DSM 16071 | 0.53 | B158DRAFT_0136 | | cytochrome c oxidase, subunit I | 0.25 | B158DRAFT_0537 | | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family | — | — |
| Shewanella sp. ANA-3 | 0.53 | Shewana3_3992 | | cytochrome c oxidase, subunit I (RefSeq) | 0.25 | Shewana3_3502 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (RefSeq) | — | — |
| Rhodanobacter sp. FW510-T8 | 0.53 | OKGIIK_16520 | ctaD | cytochrome c oxidase subunit I | 0.21 | OKGIIK_11585 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS06860 | | cytochrome c oxidase subunit I | 0.23 | LRK55_RS12080 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS07120 | | cytochrome c oxidase subunit I | 0.23 | LRK54_RS12345 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.53 | Xcc-8004.4845.1 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.22 | Xcc-8004.4261.1 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.53 | ABZR86_RS12925 | | cytochrome c oxidase subunit I | 0.22 | ABZR86_RS11225 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase | — | — |
| Shewanella amazonensis SB2B | 0.53 | Sama_3484 | | cytochrome-c oxidase (RefSeq) | 0.24 | Sama_2722 | | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.52 | MIT1002_04034 | | Cytochrome c oxidase subunit 1 | 0.24 | MIT1002_02982 | | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | — | — |
| Lysobacter sp. OAE881 | 0.51 | ABIE51_RS19205 | | cytochrome c oxidase subunit I | 0.22 | ABIE51_RS05430 | | FAD-dependent oxidoreductase | — | — |
| Synechococcus elongatus PCC 7942 | 0.45 | Synpcc7942_2603 | ctaD | Cytochrome-c oxidase | 0.23 | Synpcc7942_2055 | ubiH | 2-octaprenyl-6-methoxyphenyl hydroxylase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.40 | Rv3043c | | Probable cytochrome C oxidase polypeptide I CtaD (cytochrome AA3 subunit 1) | 0.07 | Rv1751 | | Probable oxidoreductase | — | — |
Not shown: 6 genomes with orthologs for TX73_004290 only; 31 genomes with orthologs for TX73_001410 only