| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Sinorhizobium meliloti 1021 | 1.0 | SMc03158 | | ABC transporter permease | 1.0 | SMc02659 | | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein | 0.67 | 4 |
| Rhodopseudomonas palustris CGA009 | 0.69 | TX73_007325 | | ABC transporter permease | 0.58 | TX73_013955 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 86 |
| Rhizobium sp. OAE497 | 0.69 | ABIE40_RS23110 | | methionine ABC transporter permease | 0.83 | ABIE40_RS06050 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 107 |
| Agrobacterium fabrum C58 | 0.69 | Atu4488 | | ABC transporter permease | 0.85 | Atu1030 | | GTP pyrophosphohydrolase/synthetase, RelA/SpoT family | low | > 89 |
| Bosea sp. OAE506 | 0.62 | ABIE41_RS03515 | | methionine ABC transporter permease | 0.59 | ABIE41_RS19890 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 77 |
| Rhodospirillum rubrum S1H | 0.62 | Rru_A2418 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | 0.46 | Rru_A1856 | | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA (NCBI) | — | — |
| Azospirillum brasilense Sp245 | 0.58 | AZOBR_RS19470 | | DL-methionine transporter permease subunit | 0.49 | AZOBR_RS22045 | | GTP pyrophosphokinase | — | — |
| Burkholderia phytofirmans PsJN | 0.55 | BPHYT_RS14815 | | methionine ABC transporter permease | 0.31 | BPHYT_RS15305 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 109 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_632 | | Methionine ABC transporter permease protein | 0.30 | Ac3H11_3664 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Azospirillum sp. SherDot2 | 0.55 | MPMX19_05548 | | D-methionine transport system permease protein MetI | 0.48 | MPMX19_00838 | | GTP pyrophosphokinase rsh | low | > 112 |
| Paraburkholderia sabiae LMG 24235 | 0.53 | QEN71_RS04165 | | methionine ABC transporter permease | 0.31 | QEN71_RS03665 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.53 | HSERO_RS04975 | | methionine ABC transporter permease | 0.33 | HSERO_RS10635 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.53 | GFF5038 | | Methionine ABC transporter permease protein | 0.29 | GFF1034 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS09535 | | methionine ABC transporter permease | 0.32 | ABZR87_RS15225 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.52 | RS_RS04580 | | ABC transporter permease | 0.31 | RS_RS10800 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.52 | RR42_RS04560 | | methionine ABC transporter permease | 0.32 | RR42_RS04920 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Paraburkholderia graminis OAS925 | 0.52 | ABIE53_003138 | | D-methionine transport system permease protein | 0.31 | ABIE53_003230 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.18 | 78 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.52 | H281DRAFT_03905 | | D-methionine transport system permease protein | 0.31 | H281DRAFT_04004 | | (p)ppGpp synthetase I, SpoT/RelA | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS19625 | | ABC transporter permease | 0.32 | RPSI07_RS13870 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS13845 | | ABC transporter permease | 0.32 | RALBFv3_RS03315 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.51 | UW163_RS15965 | | ABC transporter permease | 0.32 | UW163_RS10410 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Acinetobacter radioresistens SK82 | 0.49 | MPMX26_01860 | | Methionine import system permease protein MetP | 0.23 | MPMX26_00539 | | GTP pyrophosphokinase | low | > 36 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_23815 | | Methionine ABC transporter permease protein | 0.32 | OH686_13550 | | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase / GTP pyrophosphokinase , (p)ppGpp synthetase II | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_04640 | | methionine ABC transporter permease | 0.30 | CSW01_13675 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | low | > 62 |
| Pseudomonas sp. RS175 | 0.47 | PFR28_04846 | | D-methionine transport system permease protein MetI | 0.32 | PFR28_04424 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | — | — |
| Fusobacterium nucleatum SB010 | 0.47 | HUW76_06265 | | ABC transporter permease | 0.29 | HUW76_09030 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 35 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS01170 | | ABC transporter permease | 0.32 | PFLU_RS29510 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS01170 | | ABC transporter permease | 0.32 | PFLU_RS29510 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_11630 | | ABC transporter permease | 0.32 | AO353_09280 | | (p)ppGpp synthetase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_3928 | | Methionine ABC transporter permease protein | 0.32 | Pf6N2E2_4361 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_10280 | | ABC transporter permease | 0.32 | AO356_12480 | | (p)ppGpp synthetase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_454 | | Methionine ABC transporter permease protein | 0.32 | PfGW456L13_780 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Klebsiella michiganensis M5al | 0.44 | BWI76_RS15035 | | metal ABC transporter permease | 0.31 | BWI76_RS27430 | | (p)ppGpp synthetase | low | > 92 |
| Rahnella sp. WP5 | 0.44 | EX31_RS15585 | | ABC transporter permease | 0.31 | EX31_RS15810 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 89 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.44 | Psyr_0349 | | Binding-protein-dependent transport systems inner membrane component | 0.32 | Psyr_0209 | | RelA/SpoT protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.44 | Psyr_0349 | | Binding-protein-dependent transport systems inner membrane component | 0.32 | Psyr_0209 | | RelA/SpoT protein | — | — |
| Pseudomonas putida KT2440 | 0.43 | PP_0219 | | L,D-methionine D-methionine ABC transporter - permease subunit | 0.32 | PP_5302 | | bifunctional (p)ppGpp synthase/hydrolase | — | — |
| Pseudomonas simiae WCS417 | 0.43 | PS417_01060 | | ABC transporter permease | 0.32 | PS417_27830 | | (p)ppGpp synthetase | — | — |
| Enterobacter sp. TBS_079 | 0.43 | MPMX20_01956 | | Methionine import system permease protein MetP | 0.31 | MPMX20_00086 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 85 |
| Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_1675 | | ABC-type metal ion transport system, permease component | 0.31 | EX28DRAFT_3899 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 76 |
| Marinobacter adhaerens HP15 | 0.42 | HP15_3904 | | binding-protein-dependent transport systems inner membrane component | 0.30 | HP15_305 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.36 | 11 |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_03555 | metP | metal ABC transporter permease | 0.30 | OKGIIK_12100 | spoT | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_1703 | | Methionine ABC transporter permease protein | 0.32 | Pf1N1B4_2113 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Pantoea sp. MT58 | 0.41 | IAI47_20550 | | ABC transporter permease | 0.31 | IAI47_00510 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 76 |
| Serratia liquefaciens MT49 | 0.41 | IAI46_07080 | | ABC transporter permease | 0.31 | IAI46_24895 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS04375 | | methionine ABC transporter permease MetI | 0.31 | HER17_RS21385 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 75 |
| Dickeya dadantii 3937 | 0.40 | DDA3937_RS07980 | | ABC transporter permease subunit | 0.31 | DDA3937_RS00180 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Dechlorosoma suillum PS | 0.39 | Dsui_2067 | | ABC-type metal ion transport system, permease component | 0.33 | Dsui_0500 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 51 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.39 | Xcc-8004.4602.1 | | Methionine ABC transporter permease protein | 0.30 | Xcc-8004.1215.1 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_03463 | | D-methionine transport system permease protein MetI | 0.31 | OHPLBJKB_00051 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 73 |
| Escherichia coli ECRC62 | 0.39 | BNILDI_09270 | metI | D-methionine transport system permease protein MetI | 0.31 | BNILDI_04080 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 75 |
| Escherichia coli ECRC100 | 0.39 | OKFHMN_10055 | metI | D-methionine transport system permease protein MetI | 0.31 | OKFHMN_15555 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 80 |
| Escherichia coli ECRC102 | 0.39 | NIAGMN_07905 | metI | D-methionine transport system permease protein MetI | 0.31 | NIAGMN_13315 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_02400 | metI | D-methionine transport system permease protein MetI | 0.31 | NOLOHH_07435 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 75 |
| Escherichia coli BL21 | 0.39 | ECD_00197 | | DL-methionine transporter subunit | 0.31 | ECD_03507 | | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | 0.34 | 53 |
| Escherichia coli ECRC98 | 0.39 | JDDGAC_13650 | metI | D-methionine transport system permease protein MetI | 0.31 | JDDGAC_19180 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 86 |
| Escherichia coli ECRC99 | 0.39 | KEDOAH_18100 | metI | D-methionine transport system permease protein MetI | 0.31 | KEDOAH_12590 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS01090 | | methionine ABC transporter permease MetI | 0.31 | ECOLIN_RS20790 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 55 |
| Escherichia coli BW25113 | 0.39 | b0198 | metI | DL-methionine transporter subunit (NCBI) | 0.31 | b3650 | spoT | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_07995 | metI | D-methionine transport system permease protein MetI | 0.31 | HEPCGN_14375 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 87 |
| Escherichia fergusonii Becca | 0.39 | EFB2_03845 | | D-methionine transport system permease protein MetI | 0.31 | EFB2_00138 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 86 |
| Escherichia coli ECRC101 | 0.39 | MCAODC_00570 | metI | D-methionine transport system permease protein MetI | 0.31 | MCAODC_06065 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 87 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS17995 | | methionine ABC transporter permease MetI | 0.31 | DZA65_RS22150 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Dickeya dianthicola 67-19 | 0.39 | HGI48_RS16920 | | methionine ABC transporter permease MetI | 0.31 | HGI48_RS21180 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.38 | GFF22 | | Methionine ABC transporter permease protein | 0.31 | GFF357 | | 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 | low | > 78 |
| Variovorax sp. SCN45 | 0.38 | GFF3113 | | Methionine ABC transporter permease protein | 0.31 | GFF2375 | | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II | — | — |
| Variovorax sp. OAS795 | 0.38 | ABID97_RS21740 | | methionine ABC transporter permease | 0.30 | ABID97_RS23670 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS14445 | | methionine ABC transporter permease | 0.30 | LRK55_RS11520 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS14730 | | ABC transporter permease | 0.30 | LRK54_RS11795 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS00470 | | methionine ABC transporter permease | 0.31 | ABZR86_RS11850 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Castellaniella sp019104865 MT123 | 0.37 | ABCV34_RS09540 | | methionine ABC transporter permease | 0.32 | ABCV34_RS03095 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_4315 | | ABC-type metal ion transport system, permease component | 0.31 | Psest_3817 | | (p)ppGpp synthetase, RelA/SpoT family | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.33 | CCNA_02750 | | ABC transporter permease protein | 0.43 | CCNA_01622 | | Rsh ppGpp hydrolase-synthetase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.33 | CCNA_02750 | | ABC transporter permease protein | 0.43 | CCNA_01622 | | Rsh ppGpp hydrolase-synthetase | low | > 66 |
| Erwinia tracheiphila SCR3 | 0.33 | LU632_RS19825 | | methionine ABC transporter permease MetI | 0.31 | LU632_RS22200 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 74 |
| Bifidobacterium breve UCC2003 | 0.28 | BBR_RS14455 | | ABC transporter permease | 0.28 | BBR_RS16410 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
Not shown: 0 genomes with orthologs for SMc03158 only; 26 genomes with orthologs for SMc02659 only