Conservation of cofitness between SMc00450 and SMc02058 in Sinorhizobium meliloti 1021

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00450 protoheme IX farnesyltransferase 1.0 SMc02058 YAJC protein 0.56 3
Rhizobium sp. OAE497 0.69 ABIE40_RS04070 heme o synthase 0.65 ABIE40_RS08500 preprotein translocase subunit YajC low > 107
Agrobacterium fabrum C58 0.65 Atu0769 protoheme IX farnesyltransferase 0.59 Atu1563 preprotein tranlocase protein
Bosea sp. OAE506 0.48 ABIE41_RS22955 heme o synthase 0.57 ABIE41_RS15035 preprotein translocase subunit YajC
Azospirillum brasilense Sp245 0.45 AZOBR_RS10580 protoheme IX farnesyltransferase 0.46 AZOBR_RS15435 preprotein translocase subunit YajC
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_2005 protoheme IX farnesyltransferase 0.38 Ga0059261_3558 preprotein translocase, YajC subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS00115 heme o synthase 0.35 A4249_RS04660 preprotein translocase subunit YajC
Caulobacter crescentus NA1000 0.40 CCNA_03516 protoheme IX farnesyltransferase coxE 0.44 CCNA_02071 protein translocase subunit YajC low > 66
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_03516 protoheme IX farnesyltransferase coxE 0.44 CCNA_02071 protein translocase subunit YajC
Phaeobacter inhibens DSM 17395 0.39 PGA1_c06260 protoheme IX farnesyltransferase CtaB 0.50 PGA1_c18930 preprotein translocase YajC-like protein
Dinoroseobacter shibae DFL-12 0.38 Dshi_1141 protoheme IX farnesyltransferase (RefSeq) 0.49 Dshi_1860 preprotein translocase, YajC subunit (RefSeq)
Pseudomonas stutzeri RCH2 0.30 Psest_4334 protoheme IX farnesyltransferase 0.29 Psest_1243 preprotein translocase, YajC subunit
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.4836.1 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA 0.34 Xcc-8004.2169.1 Preprotein translocase subunit YajC (TC 3.A.5.1.1) low > 74
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS12895 heme o synthase 0.33 ABZR86_RS09535 preprotein translocase subunit YajC low > 74
Lysobacter sp. OAE881 0.29 ABIE51_RS19165 heme o synthase 0.31 ABIE51_RS15015 preprotein translocase subunit YajC 0.81 52
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_0671 protoheme IX farnesyltransferase 0.39 B158DRAFT_2517 preprotein translocase, YajC subunit
Alteromonas macleodii MIT1002 0.28 MIT1002_04027 Protoheme IX farnesyltransferase 0.37 MIT1002_02812 preprotein translocase subunit YajC low > 70
Variovorax sp. SCN45 0.28 GFF2307 Heme O synthase, protoheme IX farnesyltransferase, COX10-CtaB 0.37 GFF5484 Protein translocase subunit YajC low > 127
Marinobacter adhaerens HP15 0.28 HP15_3780 protoheme IX farnesyltransferase 0.33 HP15_1480 preprotein translocase, YajC subunit
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1862 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone 0.28 Pf1N1B4_3007 Preprotein translocase subunit YajC (TC 3.A.5.1.1)
Variovorax sp. OAS795 0.27 ABID97_RS23915 heme o synthase 0.45 ABID97_RS01855 preprotein translocase subunit YajC low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF698 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.34 GFF2567 Preprotein translocase subunit YajC (TC 3.A.5.1.1) low > 90
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_606 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone 0.29 PfGW456L13_4881 Preprotein translocase subunit YajC (TC 3.A.5.1.1)
Shewanella oneidensis MR-1 0.27 SO4614 ctaB protoheme IX farnesyltransferase (NCBI ptt file) 0.34 SO3112 yajC preprotein translocase, YajC subunit (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS02690 protoheme IX farnesyltransferase 0.42 BPHYT_RS03415 preprotein translocase subunit YajC
Pseudomonas sp. RS175 0.27 PFR28_04683 Protoheme IX farnesyltransferase 0.29 PFR28_00278 Sec translocon accessory complex subunit YajC
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_11200 protoheme IX farnesyltransferase 0.28 AO356_06685 preprotein translocase subunit YajC low > 104
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_16555 cyoE heme o synthase 0.33 OKGIIK_09995 yajC preprotein translocase subunit YajC low > 52
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4106 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone 0.28 Pf6N2E2_3197 Preprotein translocase subunit YajC (TC 3.A.5.1.1)
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS07085 heme o synthase 0.34 LRK54_RS03125 preprotein translocase subunit YajC low > 59
Rhodanobacter denitrificans MT42 0.26 LRK55_RS06825 heme o synthase 0.34 LRK55_RS02875 preprotein translocase subunit YajC
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS01545 heme o synthase 0.45 QEN71_RS26645 preprotein translocase subunit YajC
Ralstonia solanacearum PSI07 0.26 RPSI07_RS22315 protoheme IX farnesyltransferase 0.37 RPSI07_RS11610 preprotein translocase subunit YajC
Ralstonia solanacearum UW163 0.26 UW163_RS02590 protoheme IX farnesyltransferase 0.44 UW163_RS07935 preprotein translocase subunit YajC
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS10990 protoheme IX farnesyltransferase 0.44 RALBFv3_RS05690 preprotein translocase subunit YajC low > 76
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_01985 protoheme IX farnesyltransferase 0.42 H281DRAFT_04669 protein translocase subunit yajC
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS06845 heme o synthase 0.41 ABZR87_RS01285 preprotein translocase subunit YajC low > 80
Ralstonia solanacearum GMI1000 0.25 RS_RS01830 protoheme IX farnesyltransferase 0.37 RS_RS13580 preprotein translocase subunit YajC
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS01920 protoheme IX farnesyltransferase 0.40 RR42_RS17405 preprotein translocase subunit YajC
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_10870 protoheme IX farnesyltransferase 0.29 AO353_15795 preprotein translocase subunit YajC
Pseudomonas sp. S08-1 0.25 OH686_12285 protoheme IX farnesyltransferase 0.31 OH686_17435 preprotein translocase, YajC subunit low > 80
Paraburkholderia graminis OAS925 0.25 ABIE53_000683 protoheme IX farnesyltransferase 0.44 ABIE53_000830 preprotein translocase subunit YajC low > 113
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS20745 protoheme IX farnesyltransferase 0.34 HSERO_RS06215 preprotein translocase subunit YajC
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS00330 protoheme IX farnesyltransferase 0.27 PFLU_RS24895 preprotein translocase subunit YajC
Pseudomonas fluorescens SBW25 0.24 PFLU_RS00330 protoheme IX farnesyltransferase 0.27 PFLU_RS24895 preprotein translocase subunit YajC low > 109
Pseudomonas simiae WCS417 0.24 PS417_00340 protoheme IX farnesyltransferase 0.27 PS417_23240 preprotein translocase subunit YajC
Castellaniella sp019104865 MT123 0.23 ABCV34_RS13230 heme o synthase 0.37 ABCV34_RS15360 preprotein translocase subunit YajC
Shewanella amazonensis SB2B 0.23 Sama_3491 protoheme IX farnesyltransferase (RefSeq) 0.26 Sama_2192 yajC preprotein translocase subunit YajC (RefSeq)
Pseudomonas putida KT2440 0.23 PP_0110 CyoE like protoheme IX farnesyltransferase 0.28 PP_0834 Sec translocation complex subunit YajC low > 96
Magnetospirillum magneticum AMB-1 0.21 AMB_RS03800 protoheme IX farnesyltransferase 1 0.51 AMB_RS12650 preprotein translocase subunit YajC
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_2105 protoheme IX farnesyltransferase 0.33 Echvi_1760 preprotein translocase, YajC subunit
Rahnella sp. WP5 0.18 EX31_RS22200 protoheme IX farnesyltransferase 0.32 EX31_RS22100 preprotein translocase subunit YajC
Klebsiella michiganensis M5al 0.17 BWI76_RS06475 protoheme IX farnesyltransferase 0.33 BWI76_RS06305 preprotein translocase subunit YajC
Erwinia tracheiphila SCR3 0.17 LU632_RS18395 cyoE heme o synthase 0.29 LU632_RS18505 yajC preprotein translocase subunit YajC
Enterobacter sp. TBS_079 0.17 MPMX20_01019 Protoheme IX farnesyltransferase 0.35 MPMX20_00998 Sec translocon accessory complex subunit YajC low > 85
Enterobacter asburiae PDN3 0.17 EX28DRAFT_2543 protoheme IX farnesyltransferase 0.35 EX28DRAFT_2564 preprotein translocase, YajC subunit
Serratia liquefaciens MT49 0.17 IAI46_04965 protoheme IX farnesyltransferase 0.33 IAI46_04845 preprotein translocase subunit YajC low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.17 GFF4342 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.35 GFF4306 Preprotein translocase subunit YajC (TC 3.A.5.1.1)
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_03245 Protoheme IX farnesyltransferase 0.35 OHPLBJKB_03269 Sec translocon accessory complex subunit YajC
Escherichia coli ECRC102 0.16 NIAGMN_06435 cyoE heme o synthase 0.35 NIAGMN_06555 yajC preprotein translocase subunit YajC
Escherichia coli BL21 0.16 ECD_00379 protoheme IX farnesyltransferase 0.35 ECD_00355 SecYEG protein translocase auxillary subunit
Escherichia coli ECOR38 0.16 HEPCGN_06995 cyoE heme o synthase 0.35 HEPCGN_07140 yajC preprotein translocase subunit YajC
Escherichia coli ECRC62 0.16 BNILDI_22730 cyoE heme o synthase 0.35 BNILDI_22850 yajC preprotein translocase subunit YajC
Escherichia fergusonii Becca 0.16 EFB2_03629 Protoheme IX farnesyltransferase 0.35 EFB2_03650 Sec translocon accessory complex subunit YajC
Escherichia coli ECRC101 0.16 MCAODC_27605 cyoE heme o synthase 0.35 MCAODC_27725 yajC preprotein translocase subunit YajC
Escherichia coli ECOR27 0.16 NOLOHH_01315 cyoE heme o synthase 0.35 NOLOHH_01435 yajC preprotein translocase subunit YajC
Escherichia coli ECRC98 0.16 JDDGAC_12035 cyoE heme o synthase 0.35 JDDGAC_12155 yajC preprotein translocase subunit YajC
Escherichia coli Nissle 1917 0.16 ECOLIN_RS02575 heme o synthase 0.35 ECOLIN_RS26255 preprotein translocase subunit YajC
Escherichia coli BW25113 0.16 b0428 cyoE protoheme IX farnesyltransferase (NCBI) 0.35 b0407 yajC preprotein translocase subunit YajC (NCBI) low > 76
Escherichia coli ECRC101 0.16 OKFHMN_08380 cyoE heme o synthase 0.35 OKFHMN_08500 yajC preprotein translocase subunit YajC
Dickeya dianthicola 67-19 0.16 HGI48_RS05640 protoheme IX farnesyltransferase 0.29 HGI48_RS05535 preprotein translocase subunit YajC low > 71
Escherichia coli ECRC99 0.16 KEDOAH_19585 cyoE heme o synthase 0.35 KEDOAH_19465 yajC preprotein translocase subunit YajC
Dickeya dianthicola ME23 0.16 DZA65_RS05965 protoheme IX farnesyltransferase 0.29 DZA65_RS05860 preprotein translocase subunit YajC low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_1145 Protoheme IX farnesyltransferase 0.29 Psyr_1229 protein translocase subunit yajC
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_1145 Protoheme IX farnesyltransferase 0.29 Psyr_1229 protein translocase subunit yajC
Dickeya dadantii 3937 0.16 DDA3937_RS05595 protoheme IX farnesyltransferase 0.30 DDA3937_RS05475 preprotein translocase subunit YajC
Pectobacterium carotovorum WPP14 0.16 HER17_RS15895 heme o synthase 0.33 HER17_RS15985 preprotein translocase subunit YajC
Pantoea sp. MT58 0.15 IAI47_14700 protoheme IX farnesyltransferase 0.33 IAI47_14800 preprotein translocase subunit YajC

Not shown: 8 genomes with orthologs for SMc00450 only; 4 genomes with orthologs for SMc02058 only