| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS01085 | | chemotaxis protein CheY | 1.0 | RR42_RS18575 | | ABC transporter ATP-binding protein | 0.33 | 10 |
| Ralstonia solanacearum GMI1000 | 0.66 | RS_RS00200 | | DNA-binding response regulator | 0.92 | RS_RS14590 | | energy-dependent translational throttle protein EttA | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.65 | ABZR87_RS05135 | | response regulator transcription factor | 0.91 | ABZR87_RS02310 | | energy-dependent translational throttle protein EttA | — | — |
| Ralstonia solanacearum UW163 | 0.65 | UW163_RS03965 | | DNA-binding response regulator | 0.91 | UW163_RS06985 | | energy-dependent translational throttle protein EttA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.65 | RALBFv3_RS09615 | | DNA-binding response regulator | 0.91 | RALBFv3_RS06640 | | energy-dependent translational throttle protein EttA | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.65 | RPSI07_RS23750 | | DNA-binding response regulator | 0.92 | RPSI07_RS10585 | | energy-dependent translational throttle protein EttA | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_02208 | | two component transcriptional regulator, Fis family | 0.89 | H281DRAFT_05699 | | sulfate-transporting ATPase | — | — |
| Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS01625 | | chemotaxis protein CheY | 0.89 | BPHYT_RS17480 | | ABC transporter ATP-binding protein | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.59 | ABIE53_000420 | | two-component system response regulator RegA | 0.89 | ABIE53_003656 | | sulfate-transporting ATPase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.59 | QEN71_RS00325 | | response regulator transcription factor | 0.90 | QEN71_RS27625 | | energy-dependent translational throttle protein EttA | — | — |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS13000 | | chemotaxis protein CheY | 0.86 | HSERO_RS23550 | | ABC transporter ATP-binding protein | low | > 78 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS10115 | | response regulator transcription factor | 0.78 | ABZR86_RS10725 | | energy-dependent translational throttle protein EttA | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.44 | Psyr_4230 | | Helix-turn-helix, Fis-type | 0.74 | Psyr_4264 | | ABC transporter | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.44 | Psyr_4230 | | Helix-turn-helix, Fis-type | 0.74 | Psyr_4264 | | ABC transporter | low | > 86 |
| Dechlorosoma suillum PS | 0.43 | Dsui_1180 | | response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein | 0.83 | Dsui_2746 | | ATP-binding cassette protein, ChvD family | low | > 51 |
| Pseudomonas fluorescens GW456-L13 | 0.43 | PfGW456L13_5048 | | Dna binding response regulator PrrA (RegA) | 0.74 | PfGW456L13_1453 | | Glutathione-regulated potassium-efflux system ATP-binding protein | low | > 87 |
| Pseudomonas sp. BP01 | 0.43 | JOY50_RS10995 | | response regulator transcription factor | 0.74 | JOY50_RS24640 | ettA | energy-dependent translational throttle protein EttA | low | > 84 |
| Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS03810 | | response regulator transcription factor | 0.77 | LRK55_RS04405 | | energy-dependent translational throttle protein EttA | — | — |
| Pseudomonas stutzeri RCH2 | 0.43 | Psest_3338 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.73 | Psest_3433 | | ATP-binding cassette protein, ChvD family | low | > 67 |
| Rhodanobacter denitrificans FW104-10B01 | 0.43 | LRK54_RS04040 | | response regulator transcription factor | 0.77 | LRK54_RS04630 | | energy-dependent translational throttle protein EttA | — | — |
| Pseudomonas putida KT2440 | 0.43 | PP_0888 | | Photosynthetic apparatus regulatory protein RegA | 0.74 | PP_0674 | | ADP/ATP ratio sensor and inhibitor of translation | 0.21 | 71 |
| Pseudomonas sp. SVBP6 | 0.42 | COO64_RS04135 | | response regulator transcription factor | 0.74 | COO64_RS03005 | ettA | energy-dependent translational throttle protein EttA | low | > 93 |
| Pseudomonas sp. S08-1 | 0.42 | OH686_08680 | | Dna binding response regulator PrrA (RegA) | 0.74 | OH686_16240 | | Energy-dependent translational throttle protein EttA | low | > 80 |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_10900 | | two-component system response regulator | 0.77 | OKGIIK_11445 | ettA | energy-dependent translational throttle protein EttA | — | — |
| Pseudomonas sp. RS175 | 0.42 | PFR28_00137 | | Photosynthetic apparatus regulatory protein RegA | 0.75 | PFR28_03784 | | Energy-dependent translational throttle protein EttA | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.42 | Pf6N2E2_3302 | | Dna binding response regulator PrrA (RegA) | 0.74 | Pf6N2E2_5084 | | Glutathione-regulated potassium-efflux system ATP-binding protein | — | — |
| Pseudomonas aeruginosa PA14 | 0.42 | IKLFDK_01615 | | two-component system response regulator | 0.75 | IKLFDK_00540 | | energy-dependent translational throttle protein EttA | low | > 100 |
| Pseudomonas fluorescens FW300-N2C3 | 0.42 | AO356_07205 | | chemotaxis protein CheY | 0.74 | AO356_15735 | | ABC transporter ATP-binding protein | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS04140 | | response regulator transcription factor | 0.74 | PFLU_RS26180 | | energy-dependent translational throttle protein EttA | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.41 | GEMAOFIL_01025 | | Photosynthetic apparatus regulatory protein RegA | 0.74 | GEMAOFIL_04999 | | Energy-dependent translational throttle protein EttA | — | — |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS04140 | | response regulator transcription factor | 0.74 | PFLU_RS26180 | | energy-dependent translational throttle protein EttA | low | > 109 |
| Pseudomonas sp. DMC3 | 0.41 | GFF1794 | | Photosynthetic apparatus regulatory protein RegA | 0.75 | GFF3965 | | Energy-dependent translational throttle protein EttA | — | — |
| Pseudomonas simiae WCS417 | 0.41 | PS417_04100 | | chemotaxis protein CheY | 0.74 | PS417_24265 | | ABC transporter ATP-binding protein | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_05335 | | chemotaxis protein CheY | 0.73 | AO353_14030 | | ABC transporter ATP-binding protein | — | — |
| Kangiella aquimarina DSM 16071 | 0.40 | B158DRAFT_1932 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.72 | B158DRAFT_0881 | | ATP-binding cassette protein, ChvD family | low | > 40 |
| Rhodanobacter sp000427505 FW510-R12 | 0.40 | LRK53_RS05865 | | response regulator transcription factor | 0.76 | LRK53_RS05385 | | energy-dependent translational throttle protein EttA | — | — |
| Shewanella oneidensis MR-1 | 0.40 | SO4172 | | DNA-binding response regulator (NCBI ptt file) | 0.72 | SO3472 | | ABC transporter, ATP-binding protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_3707 | | response regulator receiver protein (RefSeq) | 0.72 | Shewana3_1093 | | putative ABC transporter ATP-binding protein (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.39 | Sama_3186 | | response regulator receiver protein (RefSeq) | 0.72 | Sama_1013 | | putative ABC transporter ATP-binding protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.38 | Shew_3342 | | two component Fis family transcriptional regulator (RefSeq) | 0.72 | Shew_1183 | | putative ABC transporter ATP-binding protein (RefSeq) | low | > 60 |
| Marinobacter adhaerens HP15 | 0.37 | HP15_3981 | | two component transcriptional regulator, Fis family | 0.72 | HP15_488 | | ABC transporter ATP-binding protein-like protein | low | > 73 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.36 | Xcc-8004.3041.1 | | Dna binding response regulator PrrA (RegA) | 0.75 | Xcc-8004.4400.1 | | ABC transporter, ATP-binding protein | — | — |
| Sinorhizobium meliloti 1021 | 0.35 | SMc02584 | | transcriptional regulator | 0.56 | SMc04454 | | ABC transporter ATP-binding protein | — | — |
| Agrobacterium fabrum C58 | 0.34 | Atu0050 | | two component response regulator | 0.53 | Atu2125 | | ABC transporter, nucleotide binding/ATPase protein | low | > 89 |
| Rhizobium sp. OAE497 | 0.34 | ABIE40_RS19505 | | ActR/PrrA/RegA family redox response regulator transcription factor | 0.53 | ABIE40_RS11960 | | energy-dependent translational throttle protein EttA | low | > 107 |
| Dinoroseobacter shibae DFL-12 | 0.34 | Dshi_3430 | | two component transcriptional regulator, Fis family (RefSeq) | 0.57 | Dshi_2197 | | ABC transporter related (RefSeq) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.33 | TX73_002960 | | ActR/PrrA/RegA family redox response regulator transcription factor | 0.56 | TX73_018705 | | energy-dependent translational throttle protein EttA | low | > 86 |
| Phaeobacter inhibens DSM 17395 | 0.33 | PGA1_c35390 | | photosynthetic apparatus regulatory protein RegA | 0.57 | PGA1_c26300 | | ABC transporter, ATP-binding protein | — | — |
| Sphingobium sp. HT1-2 | 0.32 | GFF1818 | | Dna binding response regulator PrrA (RegA) | 0.58 | GFF1159 | | Energy-dependent translational throttle protein EttA | — | — |
| Xanthobacter sp. DMC5 | 0.31 | GFF2284 | | Photosynthetic apparatus regulatory protein RegA | 0.55 | GFF3598 | | Energy-dependent translational throttle protein EttA | — | — |
| Azospirillum sp. SherDot2 | 0.31 | MPMX19_06181 | | Photosynthetic apparatus regulatory protein RegA | 0.60 | MPMX19_00626 | | Energy-dependent translational throttle protein EttA | — | — |
| Variovorax sp. SCN45 | 0.31 | GFF5672 | | Dna binding response regulator PrrA (RegA) | 0.79 | GFF6780 | | Energy-dependent translational throttle protein EttA | low | > 127 |
| Caulobacter crescentus NA1000 | 0.31 | CCNA_01845 | | two-component response regulator protein | 0.59 | CCNA_02231 | | ABC transporter ATP-binding protein | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.31 | CCNA_01845 | | two-component response regulator protein | 0.59 | CCNA_02231 | | ABC transporter ATP-binding protein | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.30 | A4249_RS04475 | | response regulator transcription factor | 0.56 | A4249_RS07905 | | energy-dependent translational throttle protein EttA | — | — |
| Azospirillum brasilense Sp245 | 0.30 | AZOBR_RS23150 | | chemotaxis protein CheY | 0.60 | AZOBR_RS09515 | | heme ABC transporter ATP-binding protein | low | > 97 |
| Bosea sp. OAE506 | 0.30 | ABIE41_RS21050 | | response regulator transcription factor | 0.55 | ABIE41_RS12400 | | energy-dependent translational throttle protein EttA | low | > 77 |
| Acidovorax sp. GW101-3H11 | 0.29 | Ac3H11_3147 | | Dna binding response regulator PrrA (RegA) | 0.79 | Ac3H11_387 | | ABC transporter ATP-binding protein | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.29 | Ga0059261_1560 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | 0.57 | Ga0059261_0048 | | ATP-binding cassette protein, ChvD family | — | — |
| Lysobacter sp. OAE881 | 0.28 | ABIE51_RS09795 | | response regulator transcription factor | 0.77 | ABIE51_RS04610 | | energy-dependent translational throttle protein EttA | — | — |
Not shown: 2 genomes with orthologs for RR42_RS01085 only; 54 genomes with orthologs for RR42_RS18575 only