| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS05370 | | ABC transporter permease | 1.0 | RR42_RS11780 | | stomatin 2 | 0.39 | 12 |
| Ralstonia sp. UNC404CL21Col | 0.62 | ABZR87_RS15020 | | ABC transporter permease | 0.84 | ABZR87_RS11935 | | SPFH domain-containing protein | low | > 80 |
| Ralstonia solanacearum UW163 | 0.62 | UW163_RS10605 | | ABC transporter permease | 0.85 | UW163_RS13815 | | SPFH/Band 7/PHB domain protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.62 | RALBFv3_RS03120 | | ABC transporter permease | 0.85 | RALBFv3_RS00485 | | SPFH/Band 7/PHB domain protein | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.61 | RPSI07_RS14190 | | ABC transporter permease | 0.86 | RPSI07_RS17005 | | SPFH/Band 7/PHB domain protein | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.61 | RS_RS10490 | | ABC transporter permease | 0.86 | RS_RS07140 | | SPFH/Band 7/PHB domain protein | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.50 | ABIE53_001560 | | putative ABC transport system permease protein | 0.79 | ABIE53_002483 | | regulator of protease activity HflC (stomatin/prohibitin superfamily) | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.48 | H281DRAFT_04537 | | putative ABC transport system permease protein | 0.80 | H281DRAFT_00629 | | SPFH domain, Band 7 family protein | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.48 | QEN71_RS24320 | | ABC transporter permease | 0.79 | QEN71_RS06515 | | stomatin-like protein | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS06480 | | ABC transporter permease | 0.82 | BPHYT_RS12045 | | stomatin 2 | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.43 | HSERO_RS09380 | | ABC transporter permease | 0.69 | HSERO_RS10975 | | stomatin 2 | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.40 | Ac3H11_3795 | | ABC transporter, permease protein, putative | 0.68 | Ac3H11_2916 | | Putative stomatin/prohibitin-family membrane protease subunit YbbK | low | > 79 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS07595 | | FtsX-like permease family protein | 0.64 | ABID97_RS16545 | | stomatin-like protein | low | > 91 |
| Variovorax sp. SCN45 | 0.39 | GFF5663 | | ABC transporter, fused permease protein | 0.64 | GFF234 | | Protein QmcA (possibly involved in integral membrane quality control) | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF1178 | | ABC transporter, permease protein, putative | 0.66 | GFF4330 | | Putative stomatin/prohibitin-family membrane protease subunit YbbK | low | > 90 |
| Pseudomonas fluorescens FW300-N1B4 | 0.30 | Pf1N1B4_297 | | FIG00809136: hypothetical protein | 0.29 | Pf1N1B4_5313 | | Putative stomatin/prohibitin-family membrane protease subunit YbbK | low | > 87 |
| Pseudomonas simiae WCS417 | 0.29 | PS417_08395 | | ABC transporter permease | 0.35 | PS417_27225 | | protease | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_2217 | | FIG00809136: hypothetical protein | 0.32 | PfGW456L13_907 | | Putative stomatin/prohibitin-family membrane protease subunit YbbK | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.29 | AO356_03235 | | ABC transporter permease | 0.35 | AO356_13055 | | protease | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_2478 | | FIG00809136: hypothetical protein | 0.35 | Pf6N2E2_4490 | | Putative stomatin/prohibitin-family membrane protease subunit YbbK | low | > 103 |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS08345 | | ABC transporter permease | 0.35 | PFLU_RS28885 | | SPFH/Band 7/PHB domain protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS08345 | | ABC transporter permease | 0.35 | PFLU_RS28885 | | SPFH/Band 7/PHB domain protein | low | > 109 |
| Lysobacter sp. OAE881 | 0.28 | ABIE51_RS18495 | | FtsX-like permease family protein | 0.34 | ABIE51_RS16380 | | SPFH domain-containing protein | low | > 62 |
| Pseudomonas putida KT2440 | 0.27 | PP_2316 | | putative ABC transporter, permease protein | 0.29 | PP_4834 | | SPFH domain/Band 7 family protein | low | > 96 |
| Kangiella aquimarina DSM 16071 | 0.27 | B158DRAFT_2226 | | Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component | 0.33 | B158DRAFT_0707 | | Membrane protease subunits, stomatin/prohibitin homologs | low | > 40 |
| Pseudomonas sp. S08-1 | 0.26 | OH686_01800 | | ABC transporter, fused permease protein | 0.33 | OH686_11145 | | Protein QmcA, putative | 0.39 | 65 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.21 | Xcc-8004.4289.1 | | ABC transporter, permease protein, putative | 0.35 | Xcc-8004.1565.1 | | Putative stomatin/prohibitin-family membrane protease subunit YbbK | low | > 74 |
| Enterobacter asburiae PDN3 | 0.21 | EX28DRAFT_2463 | | Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component | 0.36 | EX28DRAFT_2471 | | Membrane protease subunits, stomatin/prohibitin homologs | low | > 76 |
| Marinobacter adhaerens HP15 | 0.21 | HP15_1386 | | ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component | 0.31 | HP15_3867 | | SPFH domain, Band 7 family protein | low | > 73 |
| Rahnella sp. WP5 | 0.21 | EX31_RS22615 | | ABC transporter permease | 0.32 | EX31_RS22590 | | SPFH/Band 7/PHB domain protein | low | > 89 |
| Enterobacter sp. TBS_079 | 0.20 | MPMX20_01094 | | hypothetical protein | 0.36 | MPMX20_01087 | | Protein QmcA | low | > 85 |
| Shewanella amazonensis SB2B | 0.20 | Sama_1487 | | ABC transporter, permease, putative (RefSeq) | 0.45 | Sama_0416 | | SPFH domain-containing protein/band 7 family protein (RefSeq) | low | > 62 |
| Escherichia coli ECOR38 | 0.20 | HEPCGN_06595 | ybbP | Uncharacterized ABC transporter permease YbbP | 0.36 | HEPCGN_06635 | qmcA | Protein QmcA | low | > 87 |
| Escherichia coli ECRC98 | 0.20 | JDDGAC_11610 | ybbP | Uncharacterized ABC transporter permease YbbP | 0.36 | JDDGAC_11645 | qmcA | Protein QmcA | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.20 | GFF4414 | | FIG00809136: hypothetical protein | 0.36 | GFF4407 | | Putative stomatin/prohibitin-family membrane protease subunit YbbK | low | > 78 |
| Escherichia fergusonii Becca | 0.20 | EFB2_03559 | | hypothetical protein | 0.36 | EFB2_03566 | | Protein QmcA | low | > 86 |
| Klebsiella michiganensis M5al | 0.20 | BWI76_RS06955 | | sugar ABC transporter permease | 0.36 | BWI76_RS06920 | | paraslipin | low | > 92 |
| Escherichia coli ECRC99 | 0.20 | KEDOAH_20005 | ybbP | Uncharacterized ABC transporter permease YbbP | 0.36 | KEDOAH_19970 | qmcA | Protein QmcA | — | — |
| Escherichia coli ECOR27 | 0.20 | NOLOHH_00955 | ybbP | Uncharacterized ABC transporter permease YbbP | 0.36 | NOLOHH_00990 | qmcA | Protein QmcA | low | > 75 |
| Escherichia coli BW25113 | 0.20 | b0496 | ybbP | predicted inner membrane protein (NCBI) | 0.36 | b0489 | ybbK | predicted protease, membrane anchored (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.20 | OHPLBJKB_03178 | | hypothetical protein | 0.36 | OHPLBJKB_03185 | | Protein QmcA | low | > 73 |
| Escherichia coli Nissle 1917 | 0.20 | ECOLIN_RS02930 | | putative ABC transporter permease subunit YbbP | 0.36 | ECOLIN_RS02895 | | SPFH domain-containing protein | low | > 55 |
| Escherichia coli ECRC62 | 0.20 | BNILDI_22375 | ybbP | Uncharacterized ABC transporter permease YbbP | 0.36 | BNILDI_22410 | qmcA | Protein QmcA | low | > 75 |
| Escherichia coli BL21 | 0.20 | ECD_00447 | | putative ABC transporter permease | 0.36 | ECD_00440 | | PHB domain membrane-anchored putative protease | low | > 61 |
| Escherichia coli ECRC102 | 0.19 | NIAGMN_06015 | ybbP | Uncharacterized ABC transporter permease YbbP | 0.36 | NIAGMN_06050 | qmcA | Protein QmcA | — | — |
| Shewanella sp. ANA-3 | 0.19 | Shewana3_1539 | | hypothetical protein (RefSeq) | 0.45 | Shewana3_3676 | | SPFH domain-containing protein/band 7 family protein (RefSeq) | low | > 73 |
| Escherichia coli ECRC101 | 0.19 | MCAODC_27180 | ybbP | Uncharacterized ABC transporter permease YbbP | 0.36 | MCAODC_27215 | qmcA | Protein QmcA | low | > 87 |
| Escherichia coli ECRC100 | 0.19 | OKFHMN_07965 | ybbP | Uncharacterized ABC transporter permease YbbP | 0.36 | OKFHMN_08000 | qmcA | Protein QmcA | low | > 80 |
| Erwinia tracheiphila SCR3 | 0.19 | LU632_RS15255 | | ABC transporter permease | 0.32 | LU632_RS15280 | | SPFH/Band 7/PHB domain protein | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.19 | HER17_RS15490 | | ABC transporter permease | 0.34 | HER17_RS15610 | | SPFH/Band 7/PHB domain protein | low | > 75 |
| Rhodanobacter denitrificans FW104-10B01 | 0.19 | LRK54_RS04105 | | FtsX-like permease family protein | 0.31 | LRK54_RS04380 | | SPFH/Band 7/PHB domain protein | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.19 | OKGIIK_10965 | ybbP | ABC transporter permease | 0.30 | OKGIIK_11270 | hflC | Regulator of protease activity HflC, stomatin/prohibitin superfamily | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.19 | LRK55_RS03875 | | FtsX-like permease family protein | 0.31 | LRK55_RS04155 | | SPFH domain-containing protein | low | > 63 |
| Acinetobacter radioresistens SK82 | 0.19 | MPMX26_02338 | | hypothetical protein | 0.28 | MPMX26_00662 | | Protein QmcA | low | > 36 |
| Shewanella loihica PV-4 | 0.18 | Shew_2401 | | hypothetical protein (RefSeq) | 0.45 | Shew_3386 | | band 7 protein (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.18 | SO2926 | | ABC transporter, permease, putative (NCBI ptt file) | 0.45 | SO4128 | | SPFH domain/Band 7 family protein (NCBI ptt file) | low | > 76 |
| Serratia liquefaciens MT49 | 0.18 | IAI46_05355 | | ABC transporter permease | 0.32 | IAI46_05325 | | SPFH/Band 7/PHB domain protein | low | > 86 |
| Dickeya dianthicola ME23 | 0.17 | DZA65_RS06365 | | ABC transporter permease | 0.32 | DZA65_RS06240 | | SPFH/Band 7/PHB domain protein | low | > 75 |
| Dickeya dianthicola 67-19 | 0.17 | HGI48_RS06020 | | ABC transporter permease | 0.32 | HGI48_RS05905 | | SPFH/Band 7/PHB domain protein | low | > 71 |
| Dickeya dadantii 3937 | 0.16 | DDA3937_RS05970 | | ABC transporter permease | 0.32 | DDA3937_RS05860 | | SPFH/Band 7/PHB domain protein | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.16 | CSW01_18080 | | ABC transporter permease | 0.34 | CSW01_04985 | | paraslipin | low | > 62 |
| Phaeobacter inhibens DSM 17395 | 0.14 | PGA1_c26390 | | ABC transporter, permease protein | 0.20 | PGA1_c20580 | | putative protein QmcA | low | > 62 |
| Azospirillum sp. SherDot2 | 0.13 | MPMX19_02590 | | hypothetical protein | 0.32 | MPMX19_00927 | | Protein QmcA | low | > 112 |
| Pantoea sp. MT58 | 0.13 | IAI47_14360 | | ABC transporter permease | 0.35 | IAI47_14385 | | SPFH/Band 7/PHB domain protein | low | > 76 |
| Rhodopseudomonas palustris CGA009 | 0.13 | TX73_001020 | | ABC transporter permease | 0.34 | TX73_004515 | | SPFH/Band 7/PHB domain protein | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.12 | Dshi_2679 | | protein of unknown function DUF214 (RefSeq) | 0.21 | Dshi_0613 | | band 7 protein (RefSeq) | low | > 64 |
| Bosea sp. OAE506 | 0.12 | ABIE41_RS04805 | | FtsX-like permease family protein | 0.31 | ABIE41_RS08420 | | SPFH domain-containing protein | low | > 77 |
| Sinorhizobium meliloti 1021 | 0.11 | SMc03838 | | hypothetical protein | 0.33 | SMc04020 | | hypothetical protein | low | > 103 |
| Dyella japonica UNC79MFTsu3.2 | 0.11 | ABZR86_RS10175 | | FtsX-like permease family protein | 0.32 | ABZR86_RS10545 | | SPFH domain-containing protein | low | > 74 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.08 | A4249_RS05700 | | ABC transporter permease | 0.34 | A4249_RS05635 | | SPFH/Band 7/PHB domain protein | low | > 48 |
| Sphingomonas koreensis DSMZ 15582 | 0.07 | Ga0059261_0561 | | Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component | 0.30 | Ga0059261_0897 | | Membrane protease subunits, stomatin/prohibitin homologs | low | > 68 |
| Caulobacter crescentus NA1000 Δfur | 0.06 | CCNA_01834 | | oxidoreductase | 0.36 | CCNA_03485 | | membrane protease family, stomatin/prohibitin-like protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.06 | CCNA_01834 | | oxidoreductase | 0.36 | CCNA_03485 | | membrane protease family, stomatin/prohibitin-like protein | low | > 66 |
Not shown: 15 genomes with orthologs for RR42_RS05370 only; 3 genomes with orthologs for RR42_RS11780 only