Conservation of cofitness between RR42_RS05910 and RR42_RS07580 in Cupriavidus basilensis FW507-4G11

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS05910 DNA repair protein 1.0 RR42_RS07580 helicase 0.57 9
Ralstonia solanacearum UW163 0.63 UW163_RS08210 DNA repair protein RecN 0.72 UW163_RS14840 ATP-dependent DNA helicase — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS05415 DNA repair protein RecN 0.72 RALBFv3_RS01530 ATP-dependent DNA helicase low > 76
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS01065 DNA repair protein RecN 0.72 ABZR87_RS13325 ATP-dependent DNA helicase low > 80
Ralstonia solanacearum PSI07 0.63 RPSI07_RS11890 DNA repair protein RecN 0.72 RPSI07_RS15960 ATP-dependent DNA helicase — —
Ralstonia solanacearum GMI1000 0.62 RS_RS13275 DNA repair protein RecN 0.71 RS_RS08195 ATP-dependent DNA helicase low > 80
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS03060 DNA repair protein 0.60 HSERO_RS14855 helicase 0.46 1
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS26535 DNA repair protein RecN 0.62 QEN71_RS06060 ATP-dependent DNA helicase low > 153
Paraburkholderia graminis OAS925 0.54 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.61 ABIE53_002724 ATP-dependent DNA helicase DinG 0.33 9
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_04692 DNA replication and repair protein RecN 0.63 H281DRAFT_00533 ATP-dependent DNA helicase DinG low > 103
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS03560 DNA repair protein 0.63 BPHYT_RS12495 helicase low > 109
Dechlorosoma suillum PS 0.46 Dsui_3072 DNA repair protein RecN 0.52 Dsui_2149 DNA helicase, Rad3 0.64 16
Castellaniella sp019104865 MT123 0.44 ABCV34_RS07470 DNA repair protein RecN 0.42 ABCV34_RS01875 ATP-dependent DNA helicase low > 48
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3460 DNA repair protein RecN 0.34 Ac3H11_2460 DinG family ATP-dependent helicase YoaA low > 79
Variovorax sp. SCN45 0.41 GFF2357 DNA repair protein RecN 0.33 GFF986 DinG family ATP-dependent helicase YoaA low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF829 DNA repair protein RecN 0.30 GFF4872 DinG family ATP-dependent helicase YoaA low > 90
Rahnella sp. WP5 0.38 EX31_RS21760 DNA repair protein RecN 0.36 EX31_RS10615 ATP-dependent DNA helicase low > 89
Pseudomonas sp. S08-1 0.37 OH686_17050 DNA repair protein RecN 0.15 OH686_04830 ATP-dependent helicase DinG/Rad3 low > 80
Pantoea sp. MT58 0.37 IAI47_04810 DNA repair protein RecN 0.37 IAI47_08820 ATP-dependent DNA helicase low > 76
Enterobacter sp. TBS_079 0.37 MPMX20_03486 DNA repair protein RecN 0.37 MPMX20_02714 putative ATP-dependent DNA helicase YoaA low > 85
Escherichia coli Nissle 1917 0.37 ECOLIN_RS14775 DNA repair protein RecN 0.37 ECOLIN_RS10055 ATP-dependent DNA helicase — —
Escherichia coli BL21 0.37 ECD_02504 recombination and repair protein 0.37 ECD_01778 putative ATP-dependent helicase, DinG family — —
Escherichia coli ECOR27 0.37 NOLOHH_12815 recN DNA repair protein RecN 0.37 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA low > 75
Escherichia coli ECRC62 0.37 BNILDI_11620 recN DNA repair protein RecN 0.37 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA low > 75
Escherichia coli BW25113 0.37 b2616 recN recombination and repair protein (NCBI) 0.37 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) low > 76
Marinobacter adhaerens HP15 0.37 HP15_3084 DNA repair protein RecN 0.15 HP15_1856 helicase c2 0.71 14
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_01091 DNA repair protein RecN 0.37 OHPLBJKB_01925 putative ATP-dependent helicase DinG low > 73
Dickeya dadantii 3937 0.37 DDA3937_RS04325 DNA repair protein RecN 0.37 DDA3937_RS11240 ATP-dependent DNA helicase low > 74
Escherichia coli ECOR38 0.37 HEPCGN_20265 recN DNA repair protein RecN 0.37 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA low > 87
Escherichia coli ECRC102 0.36 NIAGMN_18915 recN DNA repair protein RecN 0.37 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC99 0.36 KEDOAH_07075 recN DNA repair protein RecN 0.37 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC101 0.36 MCAODC_11670 recN DNA repair protein RecN 0.37 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA low > 87
Escherichia coli ECRC100 0.36 OKFHMN_21145 recN DNA repair protein RecN 0.37 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA low > 80
Escherichia fergusonii Becca 0.36 EFB2_01277 DNA repair protein RecN 0.37 EFB2_02192 putative ATP-dependent DNA helicase YoaA low > 86
Serratia liquefaciens MT49 0.36 IAI46_19635 DNA repair protein RecN 0.37 IAI46_14550 ATP-dependent DNA helicase low > 86
Escherichia coli ECRC98 0.36 JDDGAC_24810 recN DNA repair protein RecN 0.37 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA low > 86
Enterobacter asburiae PDN3 0.36 EX28DRAFT_2719 DNA repair protein RecN 0.37 EX28DRAFT_0750 Rad3-related DNA helicases low > 76
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_0601 DNA replication and repair protein RecN 0.38 B158DRAFT_2492 Rad3-related DNA helicases 0.65 9
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_5106 DNA repair protein RecN 0.15 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 0.55 2
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_1178 DNA repair protein RecN 0.15 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 — —
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_3370 DNA repair protein RecN 0.15 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 0.62 10
Klebsiella michiganensis M5al 0.36 BWI76_RS21560 DNA repair protein RecN 0.36 BWI76_RS17815 ATP-dependent helicase low > 92
Shewanella amazonensis SB2B 0.36 Sama_1026 recombination and repair protein (RefSeq) 0.15 Sama_1940 ATP-dependent helicase DinG (RefSeq) 0.71 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF4162 DNA repair protein RecN 0.37 GFF2823 DinG family ATP-dependent helicase YoaA low > 78
Dickeya dianthicola 67-19 0.36 HGI48_RS04320 DNA repair protein RecN 0.37 HGI48_RS11275 ATP-dependent DNA helicase low > 71
Pseudomonas sp. RS175 0.36 PFR28_00071 DNA repair protein RecN 0.15 PFR28_00520 ATP-dependent DNA helicase DinG low > 88
Dickeya dianthicola ME23 0.35 DZA65_RS04235 DNA repair protein RecN 0.37 DZA65_RS11620 ATP-dependent DNA helicase low > 75
Erwinia tracheiphila SCR3 0.35 LU632_RS16985 recN DNA repair protein RecN 0.36 LU632_RS13150 ATP-dependent DNA helicase 0.47 35
Pectobacterium carotovorum WPP14 0.35 HER17_RS17420 DNA repair protein RecN 0.36 HER17_RS11290 ATP-dependent DNA helicase low > 75
Pseudomonas stutzeri RCH2 0.35 Psest_0962 DNA repair protein RecN 0.14 Psest_2857 Rad3-related DNA helicases 0.27 23
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_07510 DNA repair protein RecN 0.15 AO356_05425 ATP-dependent DNA helicase DinG 0.84 2
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS25910 DNA repair protein RecN 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS25910 DNA repair protein RecN 0.15 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Pseudomonas simiae WCS417 0.34 PS417_24070 recombination and repair protein 0.15 PS417_06510 ATP-dependent DNA helicase DinG 0.39 11
Shewanella oneidensis MR-1 0.34 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.31 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_05660 DNA repair protein RecN 0.15 AO353_17020 ATP-dependent DNA helicase DinG 0.68 2
Shewanella sp. ANA-3 0.34 Shewana3_1104 recombination and repair protein (RefSeq) 0.31 Shewana3_1859 helicase c2 (RefSeq) low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_4197 DNA replication and repair protein RecN 0.15 Psyr_3856 Helicase c2 low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_4197 DNA replication and repair protein RecN 0.15 Psyr_3856 Helicase c2 low > 86
Pseudomonas putida KT2440 0.33 PP_4729 factor used in recombination and DNA repair 0.15 PP_1125 putative Helicase 0.12 89
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_04395 DNA repair protein RecN 0.35 CSW01_09930 ATP-dependent DNA helicase low > 62
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS05665 DNA repair protein RecN 0.36 ABZR86_RS19750 ATP-dependent DNA helicase low > 74
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_07340 recN DNA repair protein RecN 0.37 OKGIIK_02195 dinG helicase low > 52
Shewanella loihica PV-4 0.32 Shew_1196 recombination and repair protein (RefSeq) 0.32 Shew_2196 helicase c2 (RefSeq) 0.55 20
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS17960 DNA repair protein RecN 0.37 LRK54_RS12765 ATP-dependent DNA helicase low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS17815 DNA repair protein RecN 0.37 LRK55_RS12465 ATP-dependent DNA helicase low > 63
Lysobacter sp. OAE881 0.32 ABIE51_RS11655 DNA repair protein RecN 0.35 ABIE51_RS05195 ATP-dependent DNA helicase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.3431.1 DNA repair protein RecN 0.36 Xcc-8004.1496.1 DinG family ATP-dependent helicase YoaA low > 74
Alteromonas macleodii MIT1002 0.31 MIT1002_01443 Recombination protein N 0.37 MIT1002_02593 putative ATP-dependent helicase DinG low > 70
Fusobacterium nucleatum SB010 0.25 HUW76_08055 DNA repair protein RecN 0.24 HUW76_04565 ATP-dependent DNA helicase 0.89 10
Mycobacterium tuberculosis H37Rv 0.20 Rv1696 Probable DNA repair protein RecN (recombination protein N) 0.11 Rv1329c Probable ATP-dependent helicase DinG low > 58

Not shown: 29 genomes with orthologs for RR42_RS05910 only; 3 genomes with orthologs for RR42_RS07580 only