| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS02525 | | efflux RND transporter permease subunit | 1.0 | QEN71_RS05695 | | M3 family metallopeptidase | 0.90 | 12 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.93 | H281DRAFT_04170 | | multidrug efflux pump | 0.83 | H281DRAFT_00461 | | oligopeptidase A Metallo peptidase. MEROPS family M03A | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.93 | BPHYT_RS16170 | | multidrug efflux RND transporter permease subunit | 0.86 | BPHYT_RS12875 | | oligopeptidase A | — | — |
| Paraburkholderia graminis OAS925 | 0.92 | ABIE53_003408 | | multidrug efflux pump | 0.85 | ABIE53_002798 | | oligopeptidase A | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.82 | RR42_RS32420 | | multidrug efflux RND transporter permease subunit | 0.73 | RR42_RS07340 | | oligopeptidase A | low | > 128 |
| Klebsiella michiganensis M5al | 0.66 | BWI76_RS06775 | | multidrug efflux RND transporter permease subunit | 0.46 | BWI76_RS26610 | | oligopeptidase A | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF4379 | | RND efflux system, inner membrane transporter CmeB | 0.47 | GFF517 | | Oligopeptidase A (EC 3.4.24.70) | low | > 78 |
| Rahnella sp. WP5 | 0.66 | EX31_RS22470 | | multidrug efflux RND transporter permease subunit | 0.47 | EX31_RS05165 | | oligopeptidase A | low | > 89 |
| Dickeya dadantii 3937 | 0.66 | DDA3937_RS05735 | | multidrug efflux RND transporter permease subunit | 0.46 | DDA3937_RS21265 | | oligopeptidase A | low | > 74 |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS02750 | | efflux RND transporter permease AcrB | 0.47 | ECOLIN_RS19985 | | oligopeptidase A | low | > 55 |
| Escherichia coli ECRC101 | 0.65 | MCAODC_27430 | acrB | efflux RND transporter permease AcrB | 0.47 | MCAODC_06930 | prlC | oligopeptidase A | low | > 87 |
| Escherichia coli ECRC100 | 0.65 | OKFHMN_08205 | acrB | efflux RND transporter permease AcrB | 0.47 | OKFHMN_16415 | prlC | oligopeptidase A | low | > 80 |
| Escherichia coli ECOR27 | 0.65 | NOLOHH_01140 | acrB | efflux RND transporter permease AcrB | 0.47 | NOLOHH_08350 | prlC | oligopeptidase A | low | > 75 |
| Escherichia coli BL21 | 0.65 | ECD_00413 | | multidrug efflux system protein | 0.47 | ECD_03347 | | oligopeptidase A | low | > 61 |
| Escherichia fergusonii Becca | 0.65 | EFB2_03596 | | Multidrug efflux pump subunit AcrB | 0.47 | EFB2_00317 | | Oligopeptidase A | low | > 86 |
| Escherichia coli ECOR38 | 0.65 | HEPCGN_06820 | acrB | efflux RND transporter permease AcrB | 0.47 | HEPCGN_15325 | prlC | oligopeptidase A | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.65 | OHPLBJKB_03212 | | Multidrug efflux pump subunit AcrB | 0.47 | OHPLBJKB_00205 | | Oligopeptidase A | 0.58 | 8 |
| Escherichia coli ECRC102 | 0.65 | NIAGMN_06260 | acrB | efflux RND transporter permease AcrB | 0.47 | NIAGMN_14180 | prlC | oligopeptidase A | — | — |
| Escherichia coli ECRC99 | 0.65 | KEDOAH_19760 | acrB | efflux RND transporter permease AcrB | 0.47 | KEDOAH_11730 | prlC | oligopeptidase A | — | — |
| Escherichia coli BW25113 | 0.65 | b0462 | acrB | multidrug efflux system protein (NCBI) | 0.47 | b3498 | prlC | oligopeptidase A (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.65 | BNILDI_22555 | acrB | efflux RND transporter permease AcrB | 0.47 | BNILDI_03210 | prlC | oligopeptidase A | low | > 75 |
| Enterobacter asburiae PDN3 | 0.65 | EX28DRAFT_2496 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | 0.47 | EX28DRAFT_4063 | | Zn-dependent oligopeptidases | low | > 76 |
| Enterobacter sp. TBS_079 | 0.65 | MPMX20_01064 | | Multidrug efflux pump subunit AcrB | 0.47 | MPMX20_04397 | | Oligopeptidase A | low | > 85 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_05185 | | multidrug efflux RND transporter permease subunit SdeY | 0.47 | IAI46_24210 | | oligopeptidase A | low | > 86 |
| Dickeya dianthicola ME23 | 0.65 | DZA65_RS06115 | | multidrug efflux RND transporter permease subunit | 0.47 | DZA65_RS00035 | | oligopeptidase A | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.65 | HER17_RS15740 | | multidrug efflux RND transporter permease subunit | 0.46 | HER17_RS21300 | | oligopeptidase A | low | > 75 |
| Dickeya dianthicola 67-19 | 0.65 | HGI48_RS05790 | | multidrug efflux RND transporter permease subunit | 0.47 | HGI48_RS00045 | | oligopeptidase A | low | > 71 |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS18185 | | efflux RND transporter permease subunit | 0.46 | LU632_RS19470 | prlC | oligopeptidase A | — | — |
| Pantoea sp. MT58 | 0.64 | IAI47_14515 | | multidrug efflux RND transporter permease subunit | 0.47 | IAI47_01345 | | oligopeptidase A | low | > 76 |
| Azospirillum brasilense Sp245 | 0.64 | AZOBR_RS30185 | | multidrug transporter | 0.22 | AZOBR_RS23485 | | peptidase M3 | low | > 97 |
| Pseudomonas sp. S08-1 | 0.64 | OH686_16050 | | Multidrug efflux system, inner membrane proton/drug antiporter (RND type) | 0.45 | OH686_12360 | | Oligopeptidase A | low | > 80 |
| Pseudomonas fluorescens FW300-N2E2 | 0.63 | Pf6N2E2_2824 | | RND efflux system, inner membrane transporter CmeB | 0.45 | Pf6N2E2_4091 | | Oligopeptidase A (EC 3.4.24.70) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_04880 | | multidrug transporter | 0.45 | AO356_11120 | | oligopeptidase A | low | > 104 |
| Caulobacter crescentus NA1000 | 0.63 | CCNA_00850 | | cation/multidrug efflux pump acrB2 | 0.20 | CCNA_03816 | | peptidyl-dipeptidase DCP | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.63 | CCNA_00850 | | cation/multidrug efflux pump acrB2 | 0.20 | CCNA_03816 | | peptidyl-dipeptidase DCP | low | > 67 |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_17295 | | multidrug transporter | 0.44 | AO353_10775 | | oligopeptidase A | low | > 101 |
| Pseudomonas simiae WCS417 | 0.62 | PS417_06770 | | multidrug transporter | 0.45 | PS417_00245 | | oligopeptidase A | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_3246 | | RND efflux system, inner membrane transporter CmeB | 0.45 | Pf1N1B4_1844 | | Oligopeptidase A (EC 3.4.24.70) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.62 | Psest_0310 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | 0.46 | Psest_4320 | | Zn-dependent oligopeptidases | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_4581 | | RND efflux system, inner membrane transporter CmeB | 0.45 | PfGW456L13_624 | | Oligopeptidase A (EC 3.4.24.70) | low | > 87 |
| Ralstonia solanacearum GMI1000 | 0.62 | RS_RS21030 | | multidrug efflux RND transporter permease subunit | 0.71 | RS_RS08035 | | oligopeptidase A | low | > 80 |
| Shewanella oneidensis MR-1 | 0.62 | SO4692 | | AcrB/AcrD/AcrF family protein (NCBI ptt file) | 0.48 | SO4699 | prlC | oligopeptidase A (NCBI ptt file) | 0.34 | 53 |
| Pseudomonas sp. RS175 | 0.62 | PFR28_00631 | | putative efflux pump membrane transporter TtgB | 0.45 | PFR28_04699 | | Oligopeptidase A | low | > 88 |
| Shewanella sp. ANA-3 | 0.62 | Shewana3_4045 | | hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) | 0.47 | Shewana3_4051 | | oligopeptidase A (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.62 | Shew_0032 | | hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) | 0.48 | Shew_3657 | | oligopeptidase A (RefSeq) | low | > 60 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | 0.46 | Psyr_0045 | | oligopeptidase A, Metallo peptidase, MEROPS family M03A | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | 0.46 | Psyr_0045 | | oligopeptidase A, Metallo peptidase, MEROPS family M03A | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.62 | Xcc-8004.1794.1 | | RND efflux system, inner membrane transporter CmeB | 0.53 | Xcc-8004.4539.1 | | Oligopeptidase A (EC 3.4.24.70) | 0.32 | 26 |
| Ralstonia solanacearum PSI07 | 0.62 | RPSI07_RS03390 | | multidrug efflux RND transporter permease subunit | 0.70 | RPSI07_RS15795 | | oligopeptidase A | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.62 | RALBFv3_RS19795 | | multidrug efflux RND transporter permease subunit | 0.71 | RALBFv3_RS01690 | | oligopeptidase A | low | > 76 |
| Ralstonia solanacearum UW163 | 0.62 | UW163_RS19380 | | multidrug efflux RND transporter permease subunit | 0.71 | UW163_RS15000 | | oligopeptidase A | — | — |
| Shewanella amazonensis SB2B | 0.61 | Sama_3554 | | AcrB/AcrD/AcrF family protein (RefSeq) | 0.47 | Sama_3546 | | oligopeptidase A (RefSeq) | low | > 62 |
| Pseudomonas putida KT2440 | 0.61 | PP_1385 | | Probable efflux pump membrane transporter TtgB | 0.45 | PP_0096 | | oligopeptidase A | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.61 | PFLU_RS06805 | | efflux RND transporter permease subunit | 0.45 | PFLU_RS00240 | | oligopeptidase A | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.61 | PFLU_RS06805 | | efflux RND transporter permease subunit | 0.45 | PFLU_RS00240 | | oligopeptidase A | low | > 109 |
| Escherichia coli ECRC98 | 0.60 | JDDGAC_25915 | acrD | multidrug efflux RND transporter permease AcrD | 0.47 | JDDGAC_20045 | prlC | oligopeptidase A | low | > 86 |
| Dyella japonica UNC79MFTsu3.2 | 0.60 | ABZR86_RS18285 | | efflux RND transporter permease subunit | 0.43 | ABZR86_RS14940 | | M3 family metallopeptidase | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.59 | HSERO_RS06815 | | multidrug transporter | 0.63 | HSERO_RS07290 | | oligopeptidase A | low | > 78 |
| Variovorax sp. SCN45 | 0.57 | GFF5990 | | RND efflux system, inner membrane transporter | 0.57 | GFF963 | | Oligopeptidase A (EC 3.4.24.70) | low | > 127 |
| Acinetobacter radioresistens SK82 | 0.55 | MPMX26_00689 | | Multidrug resistance protein MexB | 0.40 | MPMX26_02685 | | Oligopeptidase A | low | > 36 |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS05315 | | efflux RND transporter permease subunit | 0.71 | ABZR87_RS13490 | | M3 family metallopeptidase | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF3840 | | RND efflux system, inner membrane transporter CmeB | 0.56 | GFF4214 | | Oligopeptidase A (EC 3.4.24.70) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.52 | Ac3H11_4448 | | RND efflux system, inner membrane transporter CmeB | 0.55 | Ac3H11_4097 | | Oligopeptidase A (EC 3.4.24.70) | low | > 79 |
| Variovorax sp. OAS795 | 0.52 | ABID97_RS00325 | | efflux RND transporter permease subunit | 0.57 | ABID97_RS14080 | | M3 family metallopeptidase | low | > 91 |
| Sinorhizobium meliloti 1021 | 0.50 | SMc02867 | | multidrug-efflux system transmembrane protein | 0.25 | SMc04403 | | peptidyl-dipeptidase A protein | low | > 103 |
| Sphingomonas koreensis DSMZ 15582 | 0.50 | Ga0059261_0559 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | 0.21 | Ga0059261_2479 | | Zn-dependent oligopeptidases | low | > 68 |
| Castellaniella sp019104865 MT123 | 0.49 | ABCV34_RS04225 | | efflux RND transporter permease subunit | 0.45 | ABCV34_RS04180 | | M3 family metallopeptidase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_09170 | | Efflux pump membrane transporter | 0.43 | OKGIIK_15380 | dcp | oligopeptidase A | low | > 52 |
| Dechlorosoma suillum PS | 0.47 | Dsui_3182 | | hydrophobe/amphiphile efflux-1 (HAE1) family transporter | 0.60 | Dsui_0046 | | Zn-dependent oligopeptidase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.46 | LRK54_RS02100 | | multidrug efflux RND transporter permease subunit | 0.42 | LRK54_RS08615 | | M3 family metallopeptidase | low | > 59 |
| Kangiella aquimarina DSM 16071 | 0.43 | B158DRAFT_0733 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | 0.44 | B158DRAFT_0457 | | Zn-dependent oligopeptidases | low | > 40 |
| Dinoroseobacter shibae DFL-12 | 0.12 | Dshi_0917 | | acriflavin resistance protein (RefSeq) | 0.20 | Dshi_2973 | | Peptidyl-dipeptidase Dcp (RefSeq) | low | > 64 |
Not shown: 5 genomes with orthologs for QEN71_RS02525 only; 20 genomes with orthologs for QEN71_RS05695 only