Conservation of cofitness between Psyr_4684 and Psyr_4687 in Pseudomonas syringae pv. syringae B728a

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4684 biotin synthesis protein BioC 1.0 Psyr_4687 biotin synthase 0.74 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4684 biotin synthesis protein BioC 1.00 Psyr_4687 biotin synthase 0.77 2
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_14150 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.95 AO356_14135 biotin synthase 0.65 5
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_4763 Biotin synthesis protein BioC 0.95 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) 0.77 5
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_07510 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.94 AO353_07525 biotin synthase 0.94 4
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_2490 Biotin synthesis protein BioC 0.95 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) 0.85 4
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1150 Biotin synthesis protein BioC 0.95 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) 0.87 4
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.95 PFLU_RS27650 biotin synthase BioB 0.79 4
Pseudomonas fluorescens SBW25 0.72 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.95 PFLU_RS27650 biotin synthase BioB 0.52 26
Pseudomonas sp. DMC3 0.70 GFF73 Malonyl-[acyl-carrier protein] O-methyltransferase 0.94 GFF76 Biotin synthase low > 89
Pseudomonas simiae WCS417 0.70 PS417_25990 malonyl-CoA O-methyltransferase 0.95 PS417_26005 biotin synthase 0.70 2
Pseudomonas sp. RS175 0.70 PFR28_04100 Malonyl-[acyl-carrier protein] O-methyltransferase 0.94 PFR28_04103 Biotin synthase 0.76 3
Pseudomonas sp. SVBP6 0.69 COO64_RS22710 bioC malonyl-ACP O-methyltransferase BioC 0.94 COO64_RS22725 bioB biotin synthase BioB 0.98 1
Pseudomonas segetis P6 0.69 MPMX49_00762 Malonyl-[acyl-carrier protein] O-methyltransferase 0.89 MPMX49_00759 Biotin synthase 0.81 5
Pseudomonas stutzeri RCH2 0.69 Psest_0414 biotin biosynthesis protein BioC 0.89 Psest_0411 biotin synthetase 0.80 4
Pseudomonas orientalis W4I3 0.69 QF045_RS00400 malonyl-ACP O-methyltransferase BioC 0.94 QF045_RS00415 biotin synthase BioB low > 93
Pseudomonas sp. S08-1 0.69 OH686_10340 malonyl-acyl carrier protein O-methyltransferase BioC 0.89 OH686_10355 biotin synthase 0.95 16
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_05319 Malonyl-[acyl-carrier protein] O-methyltransferase 0.94 GEMAOFIL_05322 Biotin synthase low > 96
Pseudomonas putida KT2440 0.66 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase 0.94 PP_0362 Biotin synthase 0.84 5
Pseudomonas sp. BP01 0.65 JOY50_RS17945 bioC malonyl-ACP O-methyltransferase BioC 0.93 JOY50_RS17930 bioB biotin synthase BioB 0.98 1
Pseudomonas aeruginosa PA14 0.62 IKLFDK_22920 malonyl-ACP O-methyltransferase BioC 0.89 IKLFDK_22935 biotin synthase BioB 0.89 3
Pseudomonas aeruginosa MRSN321 0.62 DY961_RS22520 bioC;go_function=malonyl-CoA malonyl-ACP O-methyltransferase BioC 0.89 DY961_RS22505 bioB;go_function=biotin biotin synthase BioB — —
Pseudomonas aeruginosa PUPa3 0.62 DQ20_RS36810 bioC;go_function=malonyl-CoA malonyl-ACP O-methyltransferase BioC 0.89 DQ20_RS36825 bioB;go_function=biotin biotin synthase BioB 0.65 1
Methylophilus sp. DMC18 0.32 GFF1685 Malonyl-[acyl-carrier protein] O-methyltransferase 0.54 GFF1682 Biotin synthase — —
Serratia liquefaciens MT49 0.32 IAI46_06535 malonyl-ACP O-methyltransferase BioC 0.67 IAI46_06525 biotin synthase BioB 0.42 63
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0867 biotin biosynthesis protein BioC 0.66 B158DRAFT_0864 biotin synthase (EC 2.8.1.6) — —
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS03020 malonyl-ACP O-methyltransferase BioC 0.55 LRK53_RS03040 biotin synthase BioB — —
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_13670 bioC malonyl-ACP O-methyltransferase BioC 0.55 OKGIIK_13650 bioB biotin synthase BioB — —
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_05655 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.69 CSW01_05645 biotin synthase low > 62
Pectobacterium carotovorum WPP14 0.29 HER17_RS13450 malonyl-ACP O-methyltransferase BioC 0.65 HER17_RS13460 biotin synthase BioB 0.61 75
Rhodanobacter denitrificans MT42 0.29 LRK55_RS09880 malonyl-ACP O-methyltransferase BioC 0.55 LRK55_RS09900 biotin synthase BioB — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS10240 malonyl-ACP O-methyltransferase BioC 0.55 LRK54_RS10260 biotin synthase BioB — —
Dickeya dadantii 3937 0.29 DDA3937_RS08520 malonyl-ACP O-methyltransferase BioC 0.65 DDA3937_RS08510 biotin synthase BioB low > 74
Rahnella sp. WP5 0.29 EX31_RS23705 malonyl-ACP O-methyltransferase BioC 0.67 EX31_RS23695 biotin synthase BioB low > 89
Dickeya dianthicola ME23 0.29 DZA65_RS08975 malonyl-ACP O-methyltransferase BioC 0.65 DZA65_RS08965 biotin synthase BioB low > 75
Dickeya dianthicola 67-19 0.29 HGI48_RS08685 malonyl-ACP O-methyltransferase BioC 0.65 HGI48_RS08675 biotin synthase BioB low > 71
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS15820 malonyl-ACP O-methyltransferase BioC 0.58 ABZR86_RS15840 biotin synthase BioB — —
Lysobacter sp. OAE881 0.28 ABIE51_RS01160 malonyl-ACP O-methyltransferase BioC 0.59 ABIE51_RS01140 biotin synthase BioB — —
Pantoea agglomerans CFBP13505 P0401 0.28 PagCFBP13505_RS03780 malonyl-ACP O-methyltransferase BioC 0.66 PagCFBP13505_RS03770 biotin synthase BioB low > 74
Dechlorosoma suillum PS 0.26 Dsui_2883 biotin biosynthesis protein BioC 0.52 Dsui_1297 biotin synthetase 0.83 4
Erwinia tracheiphila HP pepo 2.2 0.26 IJEDHG_19575 bioC malonyl-ACP O-methyltransferase BioC 0.67 IJEDHG_19565 bioB biotin synthase BioB — —
Pantoea sp. MT58 0.26 IAI47_13520 malonyl-ACP O-methyltransferase BioC 0.66 IAI47_13530 biotin synthase BioB low > 76
Erwinia tracheiphila SCR3 0.26 LU632_RS09140 bioC malonyl-ACP O-methyltransferase BioC 0.67 LU632_RS09130 bioB biotin synthase BioB — —
Marinobacter adhaerens HP15 0.25 HP15_2483 protein containing methyltransferase type 11 domain 0.71 HP15_2486 biotin synthase low > 73
Escherichia coli ECRC102 0.25 NIAGMN_04435 bioC malonyl-ACP O-methyltransferase BioC 0.66 NIAGMN_04445 bioB biotin synthase BioB low > 80
Escherichia coli ECRC100 0.25 OKFHMN_06390 bioC malonyl-ACP O-methyltransferase BioC 0.66 OKFHMN_06400 bioB biotin synthase BioB low > 79
Escherichia coli ECRC99 0.25 KEDOAH_21520 bioC malonyl-ACP O-methyltransferase BioC 0.66 KEDOAH_21510 bioB biotin synthase BioB — —
Escherichia coli ECRC101 0.25 MCAODC_25605 bioC malonyl-ACP O-methyltransferase BioC 0.66 MCAODC_25615 bioB biotin synthase BioB 0.52 8
Escherichia coli ECRC98 0.25 JDDGAC_10025 bioC malonyl-ACP O-methyltransferase BioC 0.66 JDDGAC_10035 bioB biotin synthase BioB low > 87
Escherichia coli Nissle 1917 0.24 ECOLIN_RS04140 malonyl-ACP O-methyltransferase BioC 0.66 ECOLIN_RS04130 biotin synthase BioB low > 55
Escherichia coli ECRC62 0.24 BNILDI_21030 bioC malonyl-ACP O-methyltransferase BioC 0.66 BNILDI_21040 bioB biotin synthase BioB low > 75
Escherichia fergusonii Becca 0.24 EFB2_03328 Malonyl-[acyl-carrier protein] O-methyltransferase 0.66 EFB2_03330 Biotin synthase low > 86
Escherichia coli ECOR38 0.24 HEPCGN_01650 bioC malonyl-ACP O-methyltransferase BioC 0.66 HEPCGN_01640 bioB biotin synthase BioB low > 88
Escherichia coli BW25113 0.24 b0777 bioC predicted methltransferase, enzyme of biotin synthesis (NCBI) 0.66 b0775 bioB biotin synthase (NCBI) 0.51 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_02936 Malonyl-[acyl-carrier protein] O-methyltransferase 0.66 OHPLBJKB_02938 Biotin synthase low > 74
Escherichia coli BL21 0.24 ECD_00744 malonyl-ACP O-methyltransferase, SAM-dependent 0.66 ECD_00742 biotin synthase low > 61
Klebsiella pneumoniae MKP103 0.23 KDGMDA_17035 malonyl-ACP O-methyltransferase BioC 0.66 KDGMDA_17025 biotin synthase BioB low > 95
Escherichia coli ECOR27 0.23 NOLOHH_22760 bioC malonyl-ACP O-methyltransferase BioC 0.66 NOLOHH_22770 bioB biotin synthase BioB 0.40 34
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF673 Biotin synthesis protein BioC 0.65 GFF671 Biotin synthase (EC 2.8.1.6) low > 78
Erwinia amylovora T8 0.23 OLJFJH_16750 malonyl-ACP O-methyltransferase BioC 0.67 OLJFJH_16760 biotin synthase BioB 0.39 8
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.498.1 Biotin synthesis protein BioC 0.57 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6) — —
Klebsiella michiganensis M5al 0.22 BWI76_RS08770 malonyl-ACP O-methyltransferase BioC 0.67 BWI76_RS08760 biotin synthase 0.23 4
Enterobacter sp. TBS_079 0.21 MPMX20_01405 Malonyl-[acyl-carrier protein] O-methyltransferase 0.65 MPMX20_01403 Biotin synthase 0.23 24
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2214 malonyl-acyl carrier protein O-methyltransferase BioC 0.65 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) low > 76
Shewanella sp. ANA-3 0.18 Shewana3_2517 biotin biosynthesis protein BioC (RefSeq) 0.66 Shewana3_2519 biotin synthase (RefSeq) — —
Shewanella amazonensis SB2B 0.18 Sama_1440 biotin synthesis protein BioC (RefSeq) 0.66 Sama_1438 biotin synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.18 SO2738 bioC biotin synthesis protein BioC (NCBI ptt file) 0.66 SO2740 bioB biotin synthase (NCBI ptt file) — —
Shewanella loihica PV-4 0.18 Shew_1721 methyltransferase type 11 (RefSeq) 0.65 Shew_1719 biotin synthase (RefSeq) — —
Cupriavidus basilensis FW507-4G11 0.16 RR42_RS01865 amidophosphoribosyltransferase 0.57 RR42_RS00940 biotin synthase — —
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS01485 methyltransferase domain-containing protein 0.58 QEN71_RS01085 biotin synthase BioB — —
Paraburkholderia bryophila 376MFSha3.1 0.14 H281DRAFT_01996 malonyl-CoA O-methyltransferase 0.58 H281DRAFT_02097 biotin synthase — —
Sphingobium sp. HT1-2 0.14 GFF2407 Malonyl-[acyl-carrier protein] O-methyltransferase (EC 2.1.1.197) 0.53 GFF133 Biotin synthase (EC 2.8.1.6) 0.80 12
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS20805 methyltransferase 0.51 HSERO_RS12235 biotin synthase — —
Burkholderia phytofirmans PsJN 0.13 BPHYT_RS02630 amidophosphoribosyltransferase 0.58 BPHYT_RS02150 biotin synthase — —
Ralstonia solanacearum UW163 0.13 UW163_RS02645 SAM-dependent methyltransferase 0.60 UW163_RS03115 biotin synthase BioB — —
Ralstonia solanacearum IBSBF1503 0.13 RALBFv3_RS10935 SAM-dependent methyltransferase 0.60 RALBFv3_RS10465 biotin synthase BioB — —
Ralstonia solanacearum GMI1000 0.12 RS_RS01775 SAM-dependent methyltransferase 0.60 RS_RS01305 biotin synthase — —
Ralstonia sp. UNC404CL21Col 0.12 ABZR87_RS06785 methyltransferase domain-containing protein 0.60 ABZR87_RS06265 biotin synthase BioB — —
Ralstonia solanacearum PSI07 0.12 RPSI07_RS22375 SAM-dependent methyltransferase 0.60 RPSI07_RS22850 biotin synthase BioB — —
Acinetobacter radioresistens SK82 0.12 MPMX26_02452 Malonyl-[acyl-carrier protein] O-methyltransferase 0.58 MPMX26_01785 Biotin synthase 0.98 3
Acinetobacter baumannii LAC-4 0.12 RR41_RS15225 malonyl-ACP O-methyltransferase BioC 0.60 RR41_RS11800 biotin synthase BioB — —
Phaeobacter inhibens DSM 17395 0.11 PGA1_c09170 putative biotin synthesis protein BioC 0.54 PGA1_c09120 biotin synthase BioB 0.41 19

Not shown: 4 genomes with orthologs for Psyr_4684 only; 30 genomes with orthologs for Psyr_4687 only