Conservation of cofitness between Psyr_4684 and Psyr_4683 in Pseudomonas syringae pv. syringae B728a

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4684 biotin synthesis protein BioC 1.0 Psyr_4683 dethiobiotin synthase 0.72 3
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4684 biotin synthesis protein BioC 1.00 Psyr_4683 dethiobiotin synthase 0.64 4
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_14150 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.80 AO356_14155 dethiobiotin synthetase 0.88 4
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_4763 Biotin synthesis protein BioC 0.80 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) 0.93 2
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_07510 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.81 AO353_07505 dethiobiotin synthetase 0.97 3
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_2490 Biotin synthesis protein BioC 0.80 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) 0.90 3
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1150 Biotin synthesis protein BioC 0.81 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) 0.96 3
Pseudomonas fluorescens SBW25 0.72 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.82 PFLU_RS27630 dethiobiotin synthase 0.72 6
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.82 PFLU_RS27630 dethiobiotin synthase 0.87 3
Pseudomonas simiae WCS417 0.70 PS417_25990 malonyl-CoA O-methyltransferase 0.83 PS417_25985 dethiobiotin synthetase 0.60 4
Pseudomonas sp. DMC3 0.70 GFF73 Malonyl-[acyl-carrier protein] O-methyltransferase 0.80 GFF72 ATP-dependent dethiobiotin synthetase BioD 1 low > 89
Pseudomonas sp. RS175 0.70 PFR28_04100 Malonyl-[acyl-carrier protein] O-methyltransferase 0.79 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 — —
Pseudomonas sp. SVBP6 0.69 COO64_RS22710 bioC malonyl-ACP O-methyltransferase BioC 0.77 COO64_RS22705 bioD dethiobiotin synthase 0.90 50
Pseudomonas segetis P6 0.69 MPMX49_00762 Malonyl-[acyl-carrier protein] O-methyltransferase 0.74 MPMX49_00763 ATP-dependent dethiobiotin synthetase BioD 1 0.87 3
Pseudomonas stutzeri RCH2 0.69 Psest_0414 biotin biosynthesis protein BioC 0.65 Psest_0415 dethiobiotin synthase 0.79 5
Pseudomonas sp. S08-1 0.69 OH686_10340 malonyl-acyl carrier protein O-methyltransferase BioC 0.72 OH686_10335 dethiobiotin synthase 0.97 5
Pseudomonas orientalis W4I3 0.69 QF045_RS00400 malonyl-ACP O-methyltransferase BioC 0.81 QF045_RS00395 dethiobiotin synthase low > 93
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_05319 Malonyl-[acyl-carrier protein] O-methyltransferase 0.81 GEMAOFIL_05318 ATP-dependent dethiobiotin synthetase BioD 1 low > 96
Pseudomonas putida KT2440 0.66 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase 0.72 PP_0366 dethiobiotin synthetase 0.91 4
Pseudomonas sp. BP01 0.65 JOY50_RS17945 bioC malonyl-ACP O-methyltransferase BioC 0.73 JOY50_RS17950 bioD dethiobiotin synthase 0.95 16
Pseudomonas aeruginosa PA14 0.62 IKLFDK_22920 malonyl-ACP O-methyltransferase BioC 0.64 IKLFDK_22915 dethiobiotin synthase 0.85 4
Pseudomonas aeruginosa MRSN321 0.62 DY961_RS22520 bioC;go_function=malonyl-CoA malonyl-ACP O-methyltransferase BioC 0.64 DY961_RS22525 bioD;go_function=dethiobiotin dethiobiotin synthase — —
Pseudomonas aeruginosa PUPa3 0.62 DQ20_RS36810 bioC;go_function=malonyl-CoA malonyl-ACP O-methyltransferase BioC 0.64 DQ20_RS36805 bioD;go_function=dethiobiotin dethiobiotin synthase — —
Methylophilus sp. DMC18 0.32 GFF1685 Malonyl-[acyl-carrier protein] O-methyltransferase 0.32 GFF1686 ATP-dependent dethiobiotin synthetase BioD 1 — —
Serratia liquefaciens MT49 0.32 IAI46_06535 malonyl-ACP O-methyltransferase BioC 0.48 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD low > 87
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0867 biotin biosynthesis protein BioC 0.40 B158DRAFT_0869 dethiobiotin synthase — —
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS03020 malonyl-ACP O-methyltransferase BioC 0.42 LRK53_RS01195 dethiobiotin synthase — —
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_13670 bioC malonyl-ACP O-methyltransferase BioC 0.42 OKGIIK_16455 bioD dethiobiotin synthase — —
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_05655 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.38 CSW01_05660 dethiobiotin synthase low > 62
Pectobacterium carotovorum WPP14 0.29 HER17_RS13450 malonyl-ACP O-methyltransferase BioC 0.48 HER17_RS13445 dethiobiotin synthase low > 75
Rhodanobacter denitrificans MT42 0.29 LRK55_RS09880 malonyl-ACP O-methyltransferase BioC 0.41 LRK55_RS06915 dethiobiotin synthase — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS10240 malonyl-ACP O-methyltransferase BioC 0.42 LRK54_RS07180 dethiobiotin synthase — —
Dickeya dadantii 3937 0.29 DDA3937_RS08520 malonyl-ACP O-methyltransferase BioC 0.48 DDA3937_RS08525 ATP-dependent dethiobiotin synthetase BioD low > 74
Rahnella sp. WP5 0.29 EX31_RS23705 malonyl-ACP O-methyltransferase BioC 0.44 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD low > 89
Dickeya dianthicola ME23 0.29 DZA65_RS08975 malonyl-ACP O-methyltransferase BioC 0.49 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD low > 75
Dickeya dianthicola 67-19 0.29 HGI48_RS08685 malonyl-ACP O-methyltransferase BioC 0.49 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD low > 71
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS15820 malonyl-ACP O-methyltransferase BioC 0.44 ABZR86_RS12700 dethiobiotin synthase — —
Lysobacter sp. OAE881 0.28 ABIE51_RS01160 malonyl-ACP O-methyltransferase BioC 0.43 ABIE51_RS17990 dethiobiotin synthase — —
Pantoea agglomerans CFBP13505 P0401 0.28 PagCFBP13505_RS03780 malonyl-ACP O-methyltransferase BioC 0.46 PagCFBP13505_RS03785 ATP-dependent dethiobiotin synthetase BioD low > 74
Dechlorosoma suillum PS 0.26 Dsui_2883 biotin biosynthesis protein BioC 0.41 Dsui_2884 dethiobiotin synthase 0.91 3
Erwinia tracheiphila SCR3 0.26 LU632_RS09140 bioC malonyl-ACP O-methyltransferase BioC 0.44 LU632_RS09145 bioD dethiobiotin synthase — —
Erwinia tracheiphila HP pepo 2.2 0.26 IJEDHG_19575 bioC malonyl-ACP O-methyltransferase BioC 0.43 IJEDHG_19580 bioD dethiobiotin synthase — —
Pantoea sp. MT58 0.26 IAI47_13520 malonyl-ACP O-methyltransferase BioC 0.46 IAI47_13515 ATP-dependent dethiobiotin synthetase BioD low > 76
Marinobacter adhaerens HP15 0.25 HP15_2483 protein containing methyltransferase type 11 domain 0.49 HP15_2482 dethiobiotin synthetase low > 73
Escherichia coli ECRC101 0.25 MCAODC_25605 bioC malonyl-ACP O-methyltransferase BioC 0.47 MCAODC_25600 bioD dethiobiotin synthase 0.38 27
Escherichia coli ECRC102 0.25 NIAGMN_04435 bioC malonyl-ACP O-methyltransferase BioC 0.47 NIAGMN_04430 bioD dethiobiotin synthase 0.91 2
Escherichia coli ECRC99 0.25 KEDOAH_21520 bioC malonyl-ACP O-methyltransferase BioC 0.47 KEDOAH_21525 bioD dethiobiotin synthase — —
Escherichia coli ECRC98 0.25 JDDGAC_10025 bioC malonyl-ACP O-methyltransferase BioC 0.47 JDDGAC_10020 bioD dethiobiotin synthase low > 87
Escherichia coli ECRC100 0.25 OKFHMN_06390 bioC malonyl-ACP O-methyltransferase BioC 0.47 OKFHMN_06385 bioD dethiobiotin synthase low > 79
Escherichia coli ECRC62 0.24 BNILDI_21030 bioC malonyl-ACP O-methyltransferase BioC 0.45 BNILDI_21025 bioD dethiobiotin synthase low > 75
Escherichia fergusonii Becca 0.24 EFB2_03328 Malonyl-[acyl-carrier protein] O-methyltransferase 0.46 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 low > 86
Escherichia coli Nissle 1917 0.24 ECOLIN_RS04140 malonyl-ACP O-methyltransferase BioC 0.46 ECOLIN_RS04145 dethiobiotin synthase — —
Escherichia coli ECOR38 0.24 HEPCGN_01650 bioC malonyl-ACP O-methyltransferase BioC 0.46 HEPCGN_01655 bioD dethiobiotin synthase low > 88
Escherichia coli BW25113 0.24 b0777 bioC predicted methltransferase, enzyme of biotin synthesis (NCBI) 0.46 b0778 bioD dethiobiotin synthetase (NCBI) 0.35 42
Escherichia coli BL21 0.24 ECD_00744 malonyl-ACP O-methyltransferase, SAM-dependent 0.47 ECD_00745 dethiobiotin synthetase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_02936 Malonyl-[acyl-carrier protein] O-methyltransferase 0.47 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 low > 74
Klebsiella pneumoniae MKP103 0.23 KDGMDA_17035 malonyl-ACP O-methyltransferase BioC 0.45 KDGMDA_17040 dethiobiotin synthase 0.34 75
Escherichia coli ECOR27 0.23 NOLOHH_22760 bioC malonyl-ACP O-methyltransferase BioC 0.46 NOLOHH_22755 bioD dethiobiotin synthase 0.39 41
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF673 Biotin synthesis protein BioC 0.41 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) low > 78
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.498.1 Biotin synthesis protein BioC 0.34 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) — —
Erwinia amylovora T8 0.23 OLJFJH_16750 malonyl-ACP O-methyltransferase BioC 0.41 OLJFJH_16745 dethiobiotin synthase low > 58
Klebsiella michiganensis M5al 0.22 BWI76_RS08770 malonyl-ACP O-methyltransferase BioC 0.44 BWI76_RS08775 dethiobiotin synthase 0.19 17
Enterobacter sp. TBS_079 0.21 MPMX20_01405 Malonyl-[acyl-carrier protein] O-methyltransferase 0.47 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 low > 85
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2214 malonyl-acyl carrier protein O-methyltransferase BioC 0.47 EX28DRAFT_2213 dethiobiotin synthase low > 76
Shewanella sp. ANA-3 0.18 Shewana3_2517 biotin biosynthesis protein BioC (RefSeq) 0.53 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) — —
Shewanella oneidensis MR-1 0.18 SO2738 bioC biotin synthesis protein BioC (NCBI ptt file) 0.52 SO2737 bioD dethiobiotin synthase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.18 Sama_1440 biotin synthesis protein BioC (RefSeq) 0.44 Sama_1441 bioD dithiobiotin synthetase (RefSeq) — —
Shewanella loihica PV-4 0.18 Shew_1721 methyltransferase type 11 (RefSeq) 0.55 Shew_1722 dethiobiotin synthase (RefSeq) — —
Cupriavidus basilensis FW507-4G11 0.16 RR42_RS01865 amidophosphoribosyltransferase 0.27 RR42_RS00935 dethiobiotin synthetase — —
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS01485 methyltransferase domain-containing protein 0.29 QEN71_RS01090 dethiobiotin synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.14 H281DRAFT_01996 malonyl-CoA O-methyltransferase 0.35 H281DRAFT_02096 dethiobiotin synthetase — —
Sphingobium sp. HT1-2 0.14 GFF2407 Malonyl-[acyl-carrier protein] O-methyltransferase (EC 2.1.1.197) 0.17 GFF3209 Dethiobiotin synthase BioD (EC 6.3.3.3) low > 95
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS20805 methyltransferase 0.36 HSERO_RS12255 dethiobiotin synthetase — —
Burkholderia phytofirmans PsJN 0.13 BPHYT_RS02630 amidophosphoribosyltransferase 0.37 BPHYT_RS02155 dithiobiotin synthetase — —
Ralstonia solanacearum IBSBF1503 0.13 RALBFv3_RS10935 SAM-dependent methyltransferase 0.35 RALBFv3_RS00825 dethiobiotin synthase — —
Ralstonia solanacearum UW163 0.13 UW163_RS02645 SAM-dependent methyltransferase 0.35 UW163_RS14160 dethiobiotin synthase — —
Ralstonia solanacearum GMI1000 0.12 RS_RS01775 SAM-dependent methyltransferase 0.34 RS_RS07440 ATP-dependent dethiobiotin synthetase BioD — —
Ralstonia sp. UNC404CL21Col 0.12 ABZR87_RS06785 methyltransferase domain-containing protein 0.35 ABZR87_RS12345 dethiobiotin synthase — —
Ralstonia solanacearum PSI07 0.12 RPSI07_RS22375 SAM-dependent methyltransferase 0.35 RPSI07_RS16695 dethiobiotin synthase — —
Phaeobacter inhibens DSM 17395 0.11 PGA1_c09170 putative biotin synthesis protein BioC 0.16 PGA1_c09140 dethiobiotin synthetase BioD 0.54 4

Not shown: 6 genomes with orthologs for Psyr_4684 only; 20 genomes with orthologs for Psyr_4683 only