Conservation of cofitness between Psyr_4835 and Psyr_0566 in Pseudomonas syringae pv. syringae B728a

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4835 imidazolonepropionase 1.0 Psyr_0566 4Fe-4S cluster binding protein 0.40 8
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4835 imidazolonepropionase 1.00 Psyr_0566 4Fe-4S cluster binding protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_12280 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.89 AO353_13115 epoxyqueuosine reductase low > 101
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_3798 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.88 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG low > 103
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_317 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.87 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_09595 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.88 AO356_08685 epoxyqueuosine reductase low > 104
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS01815 imidazolonepropionase 0.87 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.13 108
Pseudomonas fluorescens SBW25 0.83 PFLU_RS01815 imidazolonepropionase 0.87 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG low > 109
Pseudomonas simiae WCS417 0.83 PS417_01760 imidazolonepropionase 0.88 PS417_02460 epoxyqueuosine reductase low > 88
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1579 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.89 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas sp. RS175 0.82 PFR28_04972 Imidazolonepropionase 0.88 PFR28_05115 Epoxyqueuosine reductase low > 88
Pseudomonas putida KT2440 0.81 PP_5030 Imidazolonepropionase 0.80 PP_4900 epoxyqueuosine reductase low > 96
Rahnella sp. WP5 0.62 EX31_RS06720 imidazolonepropionase 0.57 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG low > 89
Dickeya dianthicola ME23 0.60 DZA65_RS15940 imidazolonepropionase 0.58 DZA65_RS19710 tRNA epoxyqueuosine(34) reductase QueG low > 75
Dickeya dadantii 3937 0.60 DDA3937_RS15060 imidazolonepropionase 0.58 DDA3937_RS18645 tRNA epoxyqueuosine(34) reductase QueG low > 74
Dickeya dianthicola 67-19 0.60 HGI48_RS15140 imidazolonepropionase 0.58 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG low > 71
Serratia liquefaciens MT49 0.59 IAI46_10610 imidazolonepropionase 0.59 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG low > 86
Pantoea sp. MT58 0.59 IAI47_13255 imidazolonepropionase 0.58 IAI47_02560 tRNA epoxyqueuosine(34) reductase QueG low > 76
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_1437 imidazolonepropionase (EC 3.5.2.7) 0.49 B158DRAFT_0486 iron-sulfur cluster binding protein, putative low > 40
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS23495 imidazolonepropionase 0.56 QEN71_RS02745 tRNA epoxyqueuosine(34) reductase QueG low > 153
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04869 imidazolonepropionase 0.55 H281DRAFT_04128 epoxyqueuosine reductase low > 103
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS07575 imidazolonepropionase 0.56 BPHYT_RS15960 iron-sulfur cluster binding protein low > 109
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS01015 imidazolonepropionase 0.53 ABZR87_RS00775 tRNA epoxyqueuosine(34) reductase QueG low > 80
Ralstonia solanacearum PSI07 0.55 RPSI07_RS11925 imidazolonepropionase 0.53 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG low > 81
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS16230 imidazolonepropionase 0.62 LRK54_RS15130 tRNA epoxyqueuosine(34) reductase QueG low > 59
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS16905 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.53 RR42_RS03405 epoxyqueuosine reductase low > 128
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS07870 imidazolonepropionase 0.65 ABZR86_RS00835 tRNA epoxyqueuosine(34) reductase QueG low > 74
Ralstonia solanacearum GMI1000 0.55 RS_RS13240 imidazolonepropionase 0.53 RS_RS12740 tRNA epoxyqueuosine(34) reductase QueG low > 80
Rhodanobacter denitrificans MT42 0.55 LRK55_RS15980 imidazolonepropionase 0.62 LRK55_RS14845 tRNA epoxyqueuosine(34) reductase QueG low > 63
Variovorax sp. OAS795 0.55 ABID97_RS03435 imidazolonepropionase 0.56 ABID97_RS20285 tRNA epoxyqueuosine(34) reductase QueG low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF3588 Imidazolonepropionase (EC 3.5.2.7) 0.57 GFF5474 Epoxyqueuosine (oQ) reductase QueG low > 90
Variovorax sp. SCN45 0.54 GFF6402 Imidazolonepropionase (EC 3.5.2.7) 0.51 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG low > 127
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_08425 hutI imidazolonepropionase 0.63 OKGIIK_03900 queG tRNA epoxyqueuosine(34) reductase QueG low > 52
Acidovorax sp. GW101-3H11 0.54 Ac3H11_2550 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.55 Ac3H11_306 Epoxyqueuosine (oQ) reductase QueG low > 79
Castellaniella sp019104865 MT123 0.53 ABCV34_RS12775 imidazolonepropionase 0.53 ABCV34_RS13905 tRNA epoxyqueuosine(34) reductase QueG low > 48
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS05380 imidazolonepropionase 0.53 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG low > 76
Ralstonia solanacearum UW163 0.53 UW163_RS08245 imidazolonepropionase 0.53 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG — —
Brevundimonas sp. GW460-12-10-14-LB2 0.52 A4249_RS06605 imidazolonepropionase 0.33 A4249_RS11375 tRNA epoxyqueuosine(34) reductase QueG low > 48
Shewanella sp. ANA-3 0.51 Shewana3_0098 imidazolonepropionase (RefSeq) 0.55 Shewana3_0745 putative iron-sulfur cluster binding protein (RefSeq) low > 73
Klebsiella michiganensis M5al 0.51 BWI76_RS08720 imidazolonepropionase 0.59 BWI76_RS02505 tRNA epoxyqueuosine(34) reductase QueG low > 92
Escherichia coli ECOR38 0.51 HEPCGN_01350 hutI imidazolonepropionase 0.60 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Shewanella loihica PV-4 0.50 Shew_3759 imidazolonepropionase (RefSeq) 0.55 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) low > 60
Lysobacter sp. OAE881 0.50 ABIE51_RS06250 imidazolonepropionase 0.60 ABIE51_RS08045 tRNA epoxyqueuosine(34) reductase QueG low > 62
Shewanella oneidensis MR-1 0.50 SO0095 hutI Imidazolonepropionase (EC 3.5.2.7) (from data) 0.55 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.50 MPMX20_01396 Imidazolonepropionase 0.59 MPMX20_00447 Epoxyqueuosine reductase low > 85
Agrobacterium fabrum C58 0.50 Atu3934 imidazolonepropionase 0.33 Atu0292 iron-sulfur cluster binding protein low > 89
Enterobacter asburiae PDN3 0.50 EX28DRAFT_2223 imidazolonepropionase (EC 3.5.2.7) 0.59 EX28DRAFT_3363 epoxyqueuosine reductase low > 76
Phaeobacter inhibens DSM 17395 0.50 PGA1_c36350 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.33 PGA1_c34310 Uncharacterized Fe-S protein low > 62
Caulobacter crescentus NA1000 0.49 CCNA_01011 imidazolonepropionase 0.34 CCNA_03753 iron-sulfur cluster-binding protein low > 66
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_01011 imidazolonepropionase 0.34 CCNA_03753 iron-sulfur cluster-binding protein low > 67
Rhodospirillum rubrum S1H 0.49 Rru_A1303 Imidazolonepropionase (NCBI) 0.37 Rru_A0279 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) low > 58
Shewanella amazonensis SB2B 0.49 Sama_0080 imidazolonepropionase (RefSeq) 0.54 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF663 Imidazolonepropionase (EC 3.5.2.7) 0.60 GFF819 Epoxyqueuosine (oQ) reductase QueG low > 78
Pseudomonas sp. S08-1 0.47 OH686_16735 imidazolonepropionase 0.85 OH686_09500 epoxyqueuosine reductase low > 80
Rhizobium sp. OAE497 0.47 ABIE40_RS20350 imidazolonepropionase 0.35 ABIE40_RS01310 tRNA epoxyqueuosine(34) reductase QueG low > 107
Sinorhizobium meliloti 1021 0.47 SM_b21166 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.35 SMc00406 4Fe-4S ferredoxin low > 103
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_3964 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.32 Ga0059261_1058 epoxyqueuosine reductase low > 68
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_06095 imidazolonepropionase 0.57 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG low > 62
Alteromonas macleodii MIT1002 0.46 MIT1002_00902 Imidazolonepropionase 0.62 MIT1002_03794 Epoxyqueuosine reductase low > 70
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.3295.1 Imidazolonepropionase (EC 3.5.2.7) 0.60 Xcc-8004.2252.1 Epoxyqueuosine (oQ) reductase QueG low > 74
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS11585 imidazolonepropionase 0.29 HMPREF1078_RS06835 tRNA epoxyqueuosine(34) reductase QueG low > 61
Bacteroides thetaiotaomicron VPI-5482 0.30 BT2692 imidazolonepropionase (NCBI ptt file) 0.27 BT3245 putative iron-sulfur cluster-binding protein (NCBI ptt file) low > 81
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_08870 imidazolonepropionase 0.35 CA264_19810 epoxyqueuosine reductase low > 74

Not shown: 8 genomes with orthologs for Psyr_4835 only; 26 genomes with orthologs for Psyr_0566 only