Conservation of cofitness between PP_4789 and PP_4900 in Pseudomonas putida KT2440

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein 1.0 PP_4900 epoxyqueuosine reductase 0.27 19
Pseudomonas fluorescens SBW25 0.97 PFLU_RS26570 HlyC/CorC family transporter 0.82 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.72 18
Pseudomonas simiae WCS417 0.97 PS417_24640 magnesium transporter 0.82 PS417_02460 epoxyqueuosine reductase — —
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS26570 HlyC/CorC family transporter 0.82 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG low > 109
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_06390 magnesium transporter 0.82 AO353_13115 epoxyqueuosine reductase low > 101
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_5015 Magnesium and cobalt efflux protein CorC 0.81 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG low > 103
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2709 Magnesium and cobalt efflux protein CorC 0.82 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1377 Magnesium and cobalt efflux protein CorC 0.81 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_15395 magnesium transporter 0.81 AO356_08685 epoxyqueuosine reductase 0.29 38
Pseudomonas sp. RS175 0.96 PFR28_03851 Magnesium and cobalt efflux protein CorC 0.81 PFR28_05115 Epoxyqueuosine reductase low > 88
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_4348 CBS:Transporter-associated region 0.82 Psyr_0566 4Fe-4S cluster binding protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_4348 CBS:Transporter-associated region 0.82 Psyr_0566 4Fe-4S cluster binding protein low > 86
Pseudomonas sp. S08-1 0.88 OH686_09230 Magnesium and cobalt efflux protein CorC 0.82 OH686_09500 epoxyqueuosine reductase 0.66 45
Pseudomonas stutzeri RCH2 0.85 Psest_0529 Putative Mg2+ and Co2+ transporter CorC 0.78 Psest_0677 iron-sulfur cluster binding protein, putative low > 67
Marinobacter adhaerens HP15 0.61 HP15_2470 metal ion transporter 0.67 HP15_2505 iron-sulfur cluster binding protein low > 73
Alteromonas macleodii MIT1002 0.53 MIT1002_01477 Magnesium and cobalt efflux protein CorC 0.59 MIT1002_03794 Epoxyqueuosine reductase — —
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0096 Putative Mg2+ and Co2+ transporter CorC 0.48 B158DRAFT_0486 iron-sulfur cluster binding protein, putative low > 40
Paraburkholderia graminis OAS925 0.51 ABIE53_003483 magnesium and cobalt transporter 0.54 ABIE53_003363 epoxyqueuosine reductase low > 113
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS16555 cation transporter 0.53 BPHYT_RS15960 iron-sulfur cluster binding protein low > 109
Lysobacter sp. OAE881 0.51 ABIE51_RS15510 transporter associated domain-containing protein 0.59 ABIE51_RS08045 tRNA epoxyqueuosine(34) reductase QueG low > 62
Shewanella loihica PV-4 0.51 Shew_2926 CBS domain-containing protein (RefSeq) 0.54 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.51 Sama_2578 magnesium and cobalt efflux protein CorC (RefSeq) 0.53 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.51 SO1178 corC magnesium and cobalt efflux protein CorC (NCBI ptt file) 0.54 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) — —
Ralstonia solanacearum PSI07 0.51 RPSI07_RS21410 HlyC/CorC family transporter 0.53 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG low > 81
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS07760 HlyC/CorC family transporter 0.52 ABZR87_RS00775 tRNA epoxyqueuosine(34) reductase QueG low > 80
Shewanella sp. ANA-3 0.51 Shewana3_1005 CBS domain-containing protein (RefSeq) 0.54 Shewana3_0745 putative iron-sulfur cluster binding protein (RefSeq) low > 73
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS11805 HlyC/CorC family transporter 0.53 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG low > 76
Ralstonia solanacearum GMI1000 0.50 RS_RS02630 HlyC/CorC family transporter 0.53 RS_RS12740 tRNA epoxyqueuosine(34) reductase QueG low > 80
Ralstonia solanacearum UW163 0.50 UW163_RS01780 HlyC/CorC family transporter 0.53 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG — —
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS02175 HlyC/CorC family transporter 0.52 QEN71_RS02745 tRNA epoxyqueuosine(34) reductase QueG low > 153
Dechlorosoma suillum PS 0.50 Dsui_1197 putative Mg2+ and Co2+ transporter CorC 0.50 Dsui_3502 iron-sulfur cluster binding protein, putative low > 51
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS13710 CBS domain-containing protein 0.62 LRK54_RS15130 tRNA epoxyqueuosine(34) reductase QueG low > 59
Rhodanobacter denitrificans MT42 0.50 LRK55_RS13450 transporter associated domain-containing protein 0.62 LRK55_RS14845 tRNA epoxyqueuosine(34) reductase QueG low > 63
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS03595 cation transporter 0.57 HSERO_RS04220 epoxyqueuosine reductase low > 78
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS02840 cation transporter 0.52 RR42_RS03405 epoxyqueuosine reductase low > 128
Rahnella sp. WP5 0.49 EX31_RS23185 CNNM family magnesium/cobalt transport protein CorC 0.56 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG low > 89
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.2219.1 Magnesium and cobalt efflux protein CorC 0.59 Xcc-8004.2252.1 Epoxyqueuosine (oQ) reductase QueG low > 74
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_04900 magnesium and cobalt efflux protein CorC 0.57 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG 0.71 47
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02955 CBS domain-containing protein 0.62 OKGIIK_03900 queG tRNA epoxyqueuosine(34) reductase QueG low > 52
Pantoea sp. MT58 0.48 IAI47_13960 CNNM family magnesium/cobalt transport protein CorC 0.57 IAI47_02560 tRNA epoxyqueuosine(34) reductase QueG — —
Enterobacter sp. TBS_079 0.47 MPMX20_01308 Magnesium and cobalt efflux protein CorC 0.56 MPMX20_00447 Epoxyqueuosine reductase low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2313 Putative Mg2+ and Co2+ transporter CorC 0.56 EX28DRAFT_3363 epoxyqueuosine reductase low > 76
Serratia liquefaciens MT49 0.47 IAI46_06005 CNNM family magnesium/cobalt transport protein CorC 0.57 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG low > 86
Escherichia coli ECRC101 0.47 OKFHMN_07240 corC CNNM family magnesium/cobalt transport protein CorC 0.57 OKFHMN_12285 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECRC98 0.47 JDDGAC_10885 corC CNNM family magnesium/cobalt transport protein CorC 0.57 JDDGAC_15925 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECRC102 0.47 NIAGMN_05295 corC CNNM family magnesium/cobalt transport protein CorC 0.57 NIAGMN_10135 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECOR27 0.47 NOLOHH_23620 corC CNNM family magnesium/cobalt transport protein CorC 0.57 NOLOHH_04550 queG tRNA epoxyqueuosine(34) reductase QueG low > 57
Escherichia coli BW25113 0.47 b0658 ybeX predicteed ion transport (NCBI) 0.57 b4166 yjeS predicted Fe-S electron transport protein (NCBI) low > 76
Escherichia coli BL21 0.47 ECD_00626 putative ion transport 0.57 ECD_04033 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis low > 60
Escherichia coli Nissle 1917 0.47 ECOLIN_RS03540 CNNM family magnesium/cobalt transport protein CorC 0.56 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECOR38 0.47 HEPCGN_00990 corC CNNM family magnesium/cobalt transport protein CorC 0.57 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia fergusonii Becca 0.47 EFB2_03441 Magnesium and cobalt efflux protein CorC 0.56 EFB2_04369 Epoxyqueuosine reductase low > 86
Klebsiella michiganensis M5al 0.47 BWI76_RS08120 cobalt transporter 0.56 BWI76_RS02505 tRNA epoxyqueuosine(34) reductase QueG low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_03054 Magnesium and cobalt efflux protein CorC 0.57 OHPLBJKB_03876 Epoxyqueuosine reductase — —
Escherichia coli ECRC99 0.47 KEDOAH_20730 corC CNNM family magnesium/cobalt transport protein CorC 0.57 KEDOAH_15870 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECRC101 0.47 MCAODC_26455 corC CNNM family magnesium/cobalt transport protein CorC 0.56 MCAODC_02800 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli ECRC62 0.46 BNILDI_21625 corC CNNM family magnesium/cobalt transport protein CorC 0.57 BNILDI_06940 queG tRNA epoxyqueuosine(34) reductase QueG — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS09930 transporter associated domain-containing protein 0.65 ABZR86_RS00835 tRNA epoxyqueuosine(34) reductase QueG low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF4575 Magnesium and cobalt efflux protein CorC 0.57 GFF819 Epoxyqueuosine (oQ) reductase QueG low > 78
Pectobacterium carotovorum WPP14 0.46 HER17_RS15180 CNNM family magnesium/cobalt transport protein CorC 0.58 HER17_RS02555 tRNA epoxyqueuosine(34) reductase QueG low > 75
Dickeya dadantii 3937 0.44 DDA3937_RS06235 CNNM family magnesium/cobalt transport protein CorC 0.57 DDA3937_RS18645 tRNA epoxyqueuosine(34) reductase QueG low > 74
Dickeya dianthicola ME23 0.44 DZA65_RS06625 CNNM family magnesium/cobalt transport protein CorC 0.56 DZA65_RS19710 tRNA epoxyqueuosine(34) reductase QueG low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS06280 CNNM family magnesium/cobalt transport protein CorC 0.57 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG low > 71
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF1738 Magnesium and cobalt efflux protein CorC 0.56 GFF5474 Epoxyqueuosine (oQ) reductase QueG — —
Variovorax sp. SCN45 0.39 GFF1965 Magnesium and cobalt efflux protein CorC 0.51 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG low > 127
Variovorax sp. OAS795 0.39 ABID97_RS25345 transporter associated domain-containing protein 0.55 ABID97_RS20285 tRNA epoxyqueuosine(34) reductase QueG low > 91
Acidovorax sp. GW101-3H11 0.37 Ac3H11_1857 Magnesium and cobalt efflux protein CorC 0.55 Ac3H11_306 Epoxyqueuosine (oQ) reductase QueG low > 79
Acinetobacter radioresistens SK82 0.36 MPMX26_00287 Magnesium and cobalt efflux protein CorC 0.52 MPMX26_01783 Epoxyqueuosine reductase low > 36
Castellaniella sp019104865 MT123 0.31 ABCV34_RS15330 transporter associated domain-containing protein 0.52 ABCV34_RS13905 tRNA epoxyqueuosine(34) reductase QueG low > 48
Bosea sp. OAE506 0.24 ABIE41_RS04510 hemolysin family protein 0.35 ABIE41_RS03135 tRNA epoxyqueuosine(34) reductase QueG low > 77
Rhodospirillum rubrum S1H 0.24 Rru_A3773 CBS domain protein (NCBI) 0.39 Rru_A0279 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.23 AMB_RS22600 HlyC/CorC family transporter 0.34 AMB_RS03995 tRNA epoxyqueuosine(34) reductase QueG — —
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_1610 CBS domain/Transporter associated domain 0.33 Ga0059261_1058 epoxyqueuosine reductase low > 68

Not shown: 2 genomes with orthologs for PP_4789 only; 17 genomes with orthologs for PP_4900 only