Conservation of cofitness between PP_4789 and PP_4803 in Pseudomonas putida KT2440

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein 1.0 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.31 13
Pseudomonas fluorescens SBW25 0.97 PFLU_RS26570 HlyC/CorC family transporter 0.90 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas simiae WCS417 0.97 PS417_24640 magnesium transporter 0.91 PS417_24705 D-alanyl-D-alanine carboxypeptidase — —
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS26570 HlyC/CorC family transporter 0.90 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase 0.38 25
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_06390 magnesium transporter 0.88 AO353_06455 D-alanyl-D-alanine carboxypeptidase low > 101
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_5015 Magnesium and cobalt efflux protein CorC 0.88 Pf6N2E2_5001 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 103
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_15395 magnesium transporter 0.88 AO356_15330 D-alanyl-D-alanine carboxypeptidase low > 104
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2709 Magnesium and cobalt efflux protein CorC 0.88 Pf1N1B4_2696 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1377 Magnesium and cobalt efflux protein CorC 0.89 PfGW456L13_1364 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas sp. RS175 0.96 PFR28_03851 Magnesium and cobalt efflux protein CorC 0.88 PFR28_03864 D-alanyl-D-alanine carboxypeptidase DacC 0.42 11
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_4348 CBS:Transporter-associated region 0.89 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_4348 CBS:Transporter-associated region 0.89 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas sp. S08-1 0.88 OH686_09230 Magnesium and cobalt efflux protein CorC 0.77 OH686_09300 D-alanyl-D-alanine carboxypeptidase low > 80
Pseudomonas stutzeri RCH2 0.85 Psest_0529 Putative Mg2+ and Co2+ transporter CorC 0.78 Psest_0516 D-alanyl-D-alanine carboxypeptidase low > 67
Marinobacter adhaerens HP15 0.61 HP15_2470 metal ion transporter 0.54 HP15_608 serine-type D-Ala-D-Ala carboxypeptidase — —
Alteromonas macleodii MIT1002 0.53 MIT1002_01477 Magnesium and cobalt efflux protein CorC 0.44 MIT1002_01848 D-alanyl-D-alanine carboxypeptidase DacC precursor — —
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0096 Putative Mg2+ and Co2+ transporter CorC 0.49 B158DRAFT_0079 D-alanyl-D-alanine carboxypeptidase — —
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS16555 cation transporter 0.39 BPHYT_RS02415 cytochrome C550 0.43 20
Paraburkholderia graminis OAS925 0.51 ABIE53_003483 magnesium and cobalt transporter 0.38 ABIE53_000626 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) low > 113
Lysobacter sp. OAE881 0.51 ABIE51_RS15510 transporter associated domain-containing protein 0.46 ABIE51_RS03165 D-alanyl-D-alanine carboxypeptidase family protein low > 62
Shewanella loihica PV-4 0.51 Shew_2926 CBS domain-containing protein (RefSeq) 0.45 Shew_2939 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.51 Sama_2578 magnesium and cobalt efflux protein CorC (RefSeq) 0.43 Sama_2592 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) — —
Shewanella oneidensis MR-1 0.51 SO1178 corC magnesium and cobalt efflux protein CorC (NCBI ptt file) 0.43 SO1164 dacA-1 D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) — —
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS07760 HlyC/CorC family transporter 0.39 ABZR87_RS06610 D-alanyl-D-alanine carboxypeptidase family protein low > 80
Shewanella sp. ANA-3 0.51 Shewana3_1005 CBS domain-containing protein (RefSeq) 0.44 Shewana3_0991 penicillin-binding protein 6 (RefSeq) low > 73
Ralstonia solanacearum PSI07 0.51 RPSI07_RS21410 HlyC/CorC family transporter 0.40 RPSI07_RS22545 D-alanyl-D-alanine carboxypeptidase low > 81
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS11805 HlyC/CorC family transporter 0.40 RALBFv3_RS10770 D-alanyl-D-alanine carboxypeptidase low > 76
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS02175 HlyC/CorC family transporter 0.38 QEN71_RS01300 D-alanyl-D-alanine carboxypeptidase family protein low > 153
Ralstonia solanacearum UW163 0.50 UW163_RS01780 HlyC/CorC family transporter 0.40 UW163_RS02810 D-alanyl-D-alanine carboxypeptidase — —
Ralstonia solanacearum GMI1000 0.50 RS_RS02630 HlyC/CorC family transporter 0.40 RS_RS01610 D-alanyl-D-alanine carboxypeptidase low > 80
Dechlorosoma suillum PS 0.50 Dsui_1197 putative Mg2+ and Co2+ transporter CorC 0.46 Dsui_0899 D-alanyl-D-alanine carboxypeptidase low > 51
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS13710 CBS domain-containing protein 0.46 LRK54_RS06490 D-alanyl-D-alanine carboxypeptidase low > 59
Rhodanobacter denitrificans MT42 0.50 LRK55_RS13450 transporter associated domain-containing protein 0.46 LRK55_RS06235 D-alanyl-D-alanine carboxypeptidase family protein — —
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS03595 cation transporter 0.40 HSERO_RS21530 cytochrome C550 low > 78
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS02840 cation transporter 0.41 RR42_RS01680 cytochrome C550 low > 128
Rahnella sp. WP5 0.49 EX31_RS23185 CNNM family magnesium/cobalt transport protein CorC 0.43 EX31_RS23105 D-alanyl-D-alanine carboxypeptidase DacA low > 89
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.2219.1 Magnesium and cobalt efflux protein CorC 0.43 Xcc-8004.907.1 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 74
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_04900 magnesium and cobalt efflux protein CorC 0.45 CSW01_04845 D-alanyl-D-alanine carboxypeptidase low > 62
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02955 CBS domain-containing protein 0.45 OKGIIK_00090 serine-type D-Ala-D-Ala carboxypeptidase — —
Pantoea sp. MT58 0.48 IAI47_13960 CNNM family magnesium/cobalt transport protein CorC 0.42 IAI47_13090 serine hydrolase — —
Serratia liquefaciens MT49 0.47 IAI46_06005 CNNM family magnesium/cobalt transport protein CorC 0.42 IAI46_05915 D-alanyl-D-alanine carboxypeptidase DacA low > 86
Enterobacter sp. TBS_079 0.47 MPMX20_01308 Magnesium and cobalt efflux protein CorC 0.43 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2313 Putative Mg2+ and Co2+ transporter CorC 0.43 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase low > 76
Escherichia coli ECRC102 0.47 NIAGMN_05295 corC CNNM family magnesium/cobalt transport protein CorC 0.43 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_03054 Magnesium and cobalt efflux protein CorC 0.43 OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC — —
Escherichia coli BW25113 0.47 b0658 ybeX predicteed ion transport (NCBI) 0.43 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) low > 76
Escherichia coli BL21 0.47 ECD_00626 putative ion transport 0.43 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a low > 60
Escherichia coli Nissle 1917 0.47 ECOLIN_RS03540 CNNM family magnesium/cobalt transport protein CorC 0.43 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase — —
Klebsiella michiganensis M5al 0.47 BWI76_RS08120 cobalt transporter 0.44 BWI76_RS09145 serine-type D-Ala-D-Ala carboxypeptidase low > 92
Escherichia coli ECRC101 0.47 MCAODC_26455 corC CNNM family magnesium/cobalt transport protein CorC 0.43 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECOR27 0.47 NOLOHH_23620 corC CNNM family magnesium/cobalt transport protein CorC 0.43 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase low > 57
Escherichia coli ECRC98 0.47 JDDGAC_10885 corC CNNM family magnesium/cobalt transport protein CorC 0.43 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC99 0.47 KEDOAH_20730 corC CNNM family magnesium/cobalt transport protein CorC 0.43 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECOR38 0.47 HEPCGN_00990 corC CNNM family magnesium/cobalt transport protein CorC 0.43 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia fergusonii Becca 0.47 EFB2_03441 Magnesium and cobalt efflux protein CorC 0.43 EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC low > 86
Escherichia coli ECRC101 0.47 OKFHMN_07240 corC CNNM family magnesium/cobalt transport protein CorC 0.43 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Escherichia coli ECRC62 0.46 BNILDI_21625 corC CNNM family magnesium/cobalt transport protein CorC 0.43 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF4575 Magnesium and cobalt efflux protein CorC 0.41 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 78
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS09930 transporter associated domain-containing protein 0.43 ABZR86_RS17490 D-alanyl-D-alanine carboxypeptidase family protein — —
Erwinia tracheiphila SCR3 0.46 LU632_RS16320 corC CNNM family magnesium/cobalt transport protein CorC 0.42 LU632_RS16390 dacA D-alanyl-D-alanine carboxypeptidase DacA low > 74
Pectobacterium carotovorum WPP14 0.46 HER17_RS15180 CNNM family magnesium/cobalt transport protein CorC 0.44 HER17_RS12545 serine hydrolase low > 75
Dickeya dadantii 3937 0.44 DDA3937_RS06235 CNNM family magnesium/cobalt transport protein CorC 0.44 DDA3937_RS09420 serine hydrolase low > 74
Dickeya dianthicola ME23 0.44 DZA65_RS06625 CNNM family magnesium/cobalt transport protein CorC 0.44 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS06280 CNNM family magnesium/cobalt transport protein CorC 0.45 HGI48_RS09435 serine hydrolase low > 71
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF1738 Magnesium and cobalt efflux protein CorC 0.36 GFF1806 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Variovorax sp. SCN45 0.39 GFF1965 Magnesium and cobalt efflux protein CorC 0.43 GFF1728 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 127
Variovorax sp. OAS795 0.39 ABID97_RS25345 transporter associated domain-containing protein 0.37 ABID97_RS00695 D-alanyl-D-alanine carboxypeptidase family protein low > 91
Acidovorax sp. GW101-3H11 0.37 Ac3H11_1857 Magnesium and cobalt efflux protein CorC 0.34 Ac3H11_2142 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Acinetobacter radioresistens SK82 0.36 MPMX26_00287 Magnesium and cobalt efflux protein CorC 0.45 MPMX26_01051 D-alanyl-D-alanine carboxypeptidase DacA low > 36
Castellaniella sp019104865 MT123 0.31 ABCV34_RS15330 transporter associated domain-containing protein 0.40 ABCV34_RS13340 D-alanyl-D-alanine carboxypeptidase family protein 0.57 32
Bosea sp. OAE506 0.24 ABIE41_RS04510 hemolysin family protein 0.34 ABIE41_RS15965 D-alanyl-D-alanine carboxypeptidase family protein — —
Rhodospirillum rubrum S1H 0.24 Rru_A3773 CBS domain protein (NCBI) 0.36 Rru_A1704 Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) — —
Magnetospirillum magneticum AMB-1 0.23 AMB_RS22600 HlyC/CorC family transporter 0.31 AMB_RS12315 D-alanyl-D-alanine carboxypeptidase — —
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_1610 CBS domain/Transporter associated domain 0.29 Ga0059261_0122 D-alanyl-D-alanine carboxypeptidase — —

Not shown: 1 genomes with orthologs for PP_4789 only; 9 genomes with orthologs for PP_4803 only