Conservation of cofitness between PP_0422 and PP_4678 in Pseudomonas putida KT2440

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0422 Indole-3-glycerol phosphate synthase 1.0 PP_4678 Ketol-acid reductoisomerase 0.92 4
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.94 Pf6N2E2_5177 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.95 7
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.95 Pf1N1B4_2880 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.93 6
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.95 PfGW456L13_1540 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.88 7
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_14440 indole-3-glycerol-phosphate synthase 0.95 AO356_16180 ketol-acid reductoisomerase 0.95 3
Pseudomonas sp. RS175 0.87 PFR28_04043 Indole-3-glycerol phosphate synthase 0.94 PFR28_03697 Ketol-acid reductoisomerase (NADP(+)) — —
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_07210 indole-3-glycerol-phosphate synthase 0.95 AO353_14505 ketol-acid reductoisomerase 0.93 5
Pseudomonas simiae WCS417 0.86 PS417_25710 indole-3-glycerol-phosphate synthase 0.94 PS417_23800 ketol-acid reductoisomerase 0.82 6
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.94 PFLU_RS25640 ketol-acid reductoisomerase 0.77 19
Pseudomonas fluorescens SBW25 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.94 PFLU_RS25640 ketol-acid reductoisomerase 0.76 6
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_4579 indole-3-glycerol phosphate synthase 0.94 Psyr_0848 ketol-acid reductoisomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_4579 indole-3-glycerol phosphate synthase 0.94 Psyr_0848 ketol-acid reductoisomerase 0.37 30
Pseudomonas sp. S08-1 0.81 OH686_15140 Indole-3-glycerol phosphate synthase 0.96 OH686_08115 ketol-acid reductoisomerase 0.77 26
Pseudomonas stutzeri RCH2 0.77 Psest_3647 Indole-3-glycerol phosphate synthase 0.92 Psest_1038 ketol-acid reductoisomerase — —
Marinobacter adhaerens HP15 0.62 HP15_3291 indole-3-glycerol phosphate synthase 0.83 HP15_533 ketol-acid reductoisomerase — —
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.52 Xcc-8004.1060.1 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.81 27
Lysobacter sp. OAE881 0.53 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.52 ABIE51_RS17545 ketol-acid reductoisomerase 0.69 48
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.69 QEN71_RS24215 ketol-acid reductoisomerase 0.88 21
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.52 OKGIIK_13605 ilvC ketol-acid reductoisomerase low > 52
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.72 RR42_RS05445 ketol-acid reductoisomerase — —
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.70 BPHYT_RS06555 ketol-acid reductoisomerase 0.84 9
Castellaniella sp019104865 MT123 0.51 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.73 ABCV34_RS01220 ketol-acid reductoisomerase — —
Dechlorosoma suillum PS 0.51 Dsui_0168 Indole-3-glycerol phosphate synthase 0.78 Dsui_3527 ketol-acid reductoisomerase — —
Paraburkholderia graminis OAS925 0.50 ABIE53_003643 indole-3-glycerol phosphate synthase 0.69 ABIE53_001576 ketol-acid reductoisomerase — —
Variovorax sp. OAS795 0.50 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.73 ABID97_RS14895 ketol-acid reductoisomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.78 GFF4278 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.52 ABZR86_RS15940 ketol-acid reductoisomerase 0.93 26
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.69 H281DRAFT_04553 ketol-acid reductoisomerase 0.71 11
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.71 RALBFv3_RS03040 ketol-acid reductoisomerase — —
Ralstonia solanacearum UW163 0.49 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.71 UW163_RS10685 ketol-acid reductoisomerase — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.72 ABZR87_RS14945 ketol-acid reductoisomerase — —
Ralstonia solanacearum GMI1000 0.49 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.71 RS_RS10410 ketol-acid reductoisomerase — —
Acidovorax sp. GW101-3H11 0.49 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.76 Ac3H11_527 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.71 RPSI07_RS14265 ketol-acid reductoisomerase — —
Acinetobacter radioresistens SK82 0.49 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.85 MPMX26_00474 Ketol-acid reductoisomerase (NADP(+)) 0.93 20
Variovorax sp. SCN45 0.48 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.73 GFF1161 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86) — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.53 LRK54_RS10315 ketol-acid reductoisomerase low > 59
Rhodanobacter denitrificans MT42 0.47 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.53 LRK55_RS09955 ketol-acid reductoisomerase low > 63
Rhizobium sp. OAE497 0.45 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.63 ABIE40_RS11360 ketol-acid reductoisomerase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.74 HSERO_RS19010 ketol-acid reductoisomerase low > 78
Phaeobacter inhibens DSM 17395 0.45 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.63 PGA1_c06580 ketol-acid reductoisomerase IlvC — —
Rhodospirillum rubrum S1H 0.45 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.67 Rru_A0469 Ketol-acid reductoisomerase (NCBI) 0.95 1
Azospirillum sp. SherDot2 0.44 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.67 MPMX19_01774 Ketol-acid reductoisomerase (NADP(+)) — —
Magnetospirillum magneticum AMB-1 0.44 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.66 AMB_RS17750 ketol-acid reductoisomerase — —
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.65 Ga0059261_0066 ketol-acid reductoisomerase (EC 1.1.1.86) — —
Rhodopseudomonas palustris CGA009 0.44 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.66 TX73_010485 ketol-acid reductoisomerase — —
Dinoroseobacter shibae DFL-12 0.44 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.62 Dshi_2396 ketol-acid reductoisomerase (RefSeq) — —
Azospirillum brasilense Sp245 0.42 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.66 AZOBR_RS06570 ketol-acid reductoisomerase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.48 A4249_RS10025 ketol-acid reductoisomerase — —
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Caulobacter crescentus NA1000 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Agrobacterium fabrum C58 0.41 Atu1688 indole-3-glycerol-phosphate synthase 0.62 Atu2019 ketol-acid reductoisomerase — —
Sinorhizobium meliloti 1021 0.40 SMc00236 Indole-3-glycerol phosphate synthase 0.65 SMc04346 ketol-acid reductoisomerase 0.76 28
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_2508 Indole-3-glycerol phosphate synthase 0.22 Echvi_2058 ketol-acid reductoisomerase — —
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.61 Synpcc7942_1552 ilvC ketol-acid reductoisomerase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC 0.21 ABZR88_RS11590 ketol-acid reductoisomerase — —
Mycobacterium tuberculosis H37Rv 0.28 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.55 Rv3001c Probable KETOL-acid reductoisomerase IlvC (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase) — —
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.57 DVU1378 ilvC ketol-acid reductoisomerase (TIGR) 0.81 25

Not shown: 8 genomes with orthologs for PP_0422 only; 4 genomes with orthologs for PP_4678 only