Conservation of cofitness between PP_4066 and PP_2217 in Pseudomonas putida KT2440

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4066 methylglutaconyl-CoA hydratase 1.0 PP_2217 enoyl-CoA hydratase 0.28 13
Pseudomonas simiae WCS417 0.80 PS417_17025 gamma-carboxygeranoyl-CoA hydratase 0.86 PS417_13845 enoyl-CoA hydratase — —
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS18975 gamma-carboxygeranoyl-CoA hydratase 0.85 PFLU_RS14775 enoyl-CoA hydratase low > 109
Pseudomonas fluorescens SBW25 0.80 PFLU_RS18975 gamma-carboxygeranoyl-CoA hydratase 0.85 PFLU_RS14775 enoyl-CoA hydratase low > 109
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_2589 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.86 PfGW456L13_2984 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) 0.56 17
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_3985 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.86 Pf1N1B4_4788 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) — —
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_20340 gamma-carboxygeranoyl-CoA hydratase 0.85 AO353_25675 enoyl-CoA hydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_2468 Enoyl-CoA hydratase/isomerase 0.80 Psyr_3030 short chain enoyl-CoA hydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_2468 Enoyl-CoA hydratase/isomerase 0.80 Psyr_3030 short chain enoyl-CoA hydratase — —
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_2193 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.86 Pf6N2E2_1147 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) 0.48 11
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_01590 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.86 AO356_26360 enoyl-CoA hydratase 0.34 18
Pseudomonas sp. S08-1 0.76 OH686_00845 Methylglutaconyl-CoA hydratase 0.25 OH686_05875 Enoyl-CoA hydratase low > 80
Pseudomonas sp. RS175 0.76 PFR28_01258 1,4-dihydroxy-2-naphthoyl-CoA synthase 0.85 PFR28_01884 putative enoyl-CoA hydratase echA8 low > 88
Pseudomonas stutzeri RCH2 0.69 Psest_1082 Enoyl-CoA hydratase/carnithine racemase 0.79 Psest_2437 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) (from data) 0.26 12
Shewanella loihica PV-4 0.44 Shew_2572 enoyl-CoA hydratase/isomerase (RefSeq) 0.27 Shew_2672 carnitinyl-CoA dehydratase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.43 Sama_1360 enoyl-CoA hydratase/isomerase (RefSeq) 0.23 Sama_1378 enoyl-CoA hydratase (RefSeq) low > 62
Azospirillum sp. SherDot2 0.43 MPMX19_03939 Enoyl-CoA-hydratase 0.66 MPMX19_02766 putative enoyl-CoA hydratase echA8 low > 112
Shewanella oneidensis MR-1 0.43 SO1895 enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) 0.23 SO1680 enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) low > 76
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS15435 enoyl-CoA hydratase 0.57 HSERO_RS19405 enoyl-CoA hydratase low > 78
Shewanella sp. ANA-3 0.42 Shewana3_1670 methylglutaconyl-CoA hydratase (RefSeq) 0.23 Shewana3_2768 enoyl-CoA hydratase (RefSeq) low > 73
Magnetospirillum magneticum AMB-1 0.41 AMB_RS03470 enoyl-CoA hydratase 0.69 AMB_RS03265 enoyl-CoA hydratase low > 64
Acinetobacter radioresistens SK82 0.40 MPMX26_00630 2,3-dehydroadipyl-CoA hydratase 0.72 MPMX26_01546 putative enoyl-CoA hydratase echA8 — —
Dechlorosoma suillum PS 0.40 Dsui_0981 enoyl-CoA hydratase/carnithine racemase 0.64 Dsui_1378 enoyl-CoA hydratase/carnithine racemase low > 51
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS10470 enoyl-CoA hydratase 0.62 RALBFv3_RS06440 enoyl-CoA hydratase low > 76
Azospirillum brasilense Sp245 0.40 AZOBR_RS22290 enoyl-CoA hydratase 0.65 AZOBR_RS01260 enoyl-CoA hydratase — —
Ralstonia solanacearum UW163 0.40 UW163_RS03110 enoyl-CoA hydratase 0.62 UW163_RS07185 enoyl-CoA hydratase — —
Ralstonia solanacearum PSI07 0.40 RPSI07_RS22845 enoyl-CoA hydratase 0.62 RPSI07_RS10800 enoyl-CoA hydratase low > 81
Ralstonia solanacearum GMI1000 0.39 RS_RS01310 enoyl-CoA hydratase 0.63 RS_RS14385 enoyl-CoA hydratase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1713 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.60 GFF619 Enoyl-CoA hydratase (EC 4.2.1.17) 0.65 22
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS06270 enoyl-CoA hydratase/isomerase family protein 0.62 ABZR87_RS02095 enoyl-CoA hydratase low > 80
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS26900 enoyl-CoA hydratase 0.61 RR42_RS18250 enoyl-CoA hydratase low > 128
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS12860 enoyl-CoA hydratase/isomerase family protein 0.63 QEN71_RS27495 enoyl-CoA hydratase low > 153
Rhodospirillum rubrum S1H 0.38 Rru_A1942 Enoyl-CoA hydratase/isomerase (NCBI) 0.67 Rru_A3801 Enoyl-CoA hydratase/isomerase (NCBI) low > 58
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS23270 enoyl-CoA hydratase 0.62 BPHYT_RS17335 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) (from data) low > 109
Paraburkholderia graminis OAS925 0.37 ABIE53_005467 methylglutaconyl-CoA hydratase 0.60 ABIE53_003629 enoyl-CoA hydratase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_01344 methylglutaconyl-CoA hydratase 0.62 H281DRAFT_05725 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) (from data) — —
Variovorax sp. OAS795 0.37 ABID97_RS25125 enoyl-CoA hydratase/isomerase family protein 0.57 ABID97_RS26735 enoyl-CoA hydratase — —
Lysobacter sp. OAE881 0.36 ABIE51_RS13190 enoyl-CoA hydratase-related protein 0.35 ABIE51_RS07570 enoyl-CoA hydratase-related protein — —
Variovorax sp. SCN45 0.36 GFF2010 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.54 GFF2128 Enoyl-CoA hydratase (EC 4.2.1.17) low > 127
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS20610 enoyl-CoA hydratase-related protein 0.36 ABZR86_RS00870 enoyl-CoA hydratase-related protein — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3014 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.61 Ac3H11_4006 Enoyl-CoA hydratase (EC 4.2.1.17) — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS02030 enoyl-CoA hydratase-related protein 0.35 LRK55_RS14880 enoyl-CoA hydratase-related protein — —
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS02275 enoyl-CoA hydratase-related protein 0.35 LRK54_RS15165 enoyl-CoA hydratase-related protein low > 59
Phaeobacter inhibens DSM 17395 0.34 PGA1_c10360 putative enoyl-CoA hydratase 0.64 PGA1_c36500 enoyl-CoA hydratase/isomerase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS03800 enoyl-CoA hydratase-related protein 0.59 A4249_RS14515 enoyl-CoA hydratase-related protein — —
Caulobacter crescentus NA1000 0.34 CCNA_02251 methylglutaconyl-CoA hydratase 0.57 CCNA_00006 enoyl-CoA hydratase — —
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_02251 methylglutaconyl-CoA hydratase 0.57 CCNA_00006 enoyl-CoA hydratase low > 67
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_09325 Enoyl-CoA hydratase 0.33 OKGIIK_03935 Enoyl-CoA hydratase — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_1304 Enoyl-CoA hydratase/isomerase (RefSeq) 0.65 Dshi_3370 Enoyl-CoA hydratase/isomerase (RefSeq) — —
Rhizobium sp. OAE497 0.31 ABIE40_RS20765 crotonase/enoyl-CoA hydratase family protein 0.65 ABIE40_RS01595 enoyl-CoA hydratase low > 107
Sinorhizobium meliloti 1021 0.31 SM_b21126 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.66 SMc01153 enoyl-CoA hydratase low > 103
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2922.1 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.35 Xcc-8004.3347.1 Enoyl-CoA hydratase (EC 4.2.1.17) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_10930 methylglutaconyl-CoA hydratase 0.53 CA264_00410 enoyl-CoA hydratase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_0343 Enoyl-CoA hydratase/carnithine racemase 0.33 Echvi_4069 Enoyl-CoA hydratase/carnithine racemase low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS09125 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.34 CA265_RS20005 enoyl-CoA hydratase low > 88
Rhodopseudomonas palustris CGA009 0.24 TX73_011065 enoyl-CoA hydratase/isomerase family protein 0.57 TX73_009315 enoyl-CoA hydratase low > 86
Agrobacterium fabrum C58 0.22 Atu3481 enoyl-CoA hydratase 0.63 Atu0322 enoyl CoA hydratase low > 89
Mycobacterium tuberculosis H37Rv 0.20 Rv0971c Probable enoyl-CoA hydratase EchA7 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) 0.65 Rv1070c Probable enoyl-CoA hydratase EchA8 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) low > 58

Not shown: 3 genomes with orthologs for PP_4066 only; 21 genomes with orthologs for PP_2217 only