| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_0958 | | phospholipid ABC transporter ATP-binding subunit | 1.0 | PP_2148 | | transcription-repair coupling factor | 0.41 | 16 |
| Pseudomonas fluorescens FW300-N2E3 | 0.95 | AO353_05150 | | ABC transporter ATP-binding protein | 0.89 | AO353_00435 | | transcription-repair coupling factor | low | > 101 |
| Pseudomonas simiae WCS417 | 0.94 | PS417_04375 | | ABC transporter ATP-binding protein | 0.87 | PS417_07635 | | transcription-repair coupling factor | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.94 | PFLU_RS04430 | | ATP-binding cassette domain-containing protein | 0.87 | PFLU_RS07710 | | transcription-repair coupling factor | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.94 | PFLU_RS04430 | | ATP-binding cassette domain-containing protein | 0.87 | PFLU_RS07710 | | transcription-repair coupling factor | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_5008 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.87 | PfGW456L13_4027 | | Transcription-repair coupling factor | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.92 | Psyr_4141 | | ABC transporter | 0.87 | Psyr_1896 | | transcription-repair coupling factor | 0.29 | 66 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.92 | Psyr_4141 | | ABC transporter | 0.87 | Psyr_1896 | | transcription-repair coupling factor | 0.37 | 42 |
| Pseudomonas sp. S08-1 | 0.92 | OH686_08510 | | Phospholipid ABC transporter ATP-binding protein MlaF | 0.84 | OH686_21990 | | transcription-repair coupling factor | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_07005 | | ABC transporter ATP-binding protein | 0.89 | AO356_02270 | | transcription-repair coupling factor | 0.22 | 79 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_00179 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.89 | PFR28_01123 | | Transcription-repair-coupling factor | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_3260 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.89 | Pf6N2E2_2278 | | Transcription-repair coupling factor | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.90 | Pf1N1B4_1074 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.87 | Pf1N1B4_3916 | | Transcription-repair coupling factor | — | — |
| Pseudomonas stutzeri RCH2 | 0.89 | Psest_3307 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.85 | Psest_1653 | | transcription-repair coupling factor (mfd) | low | > 67 |
| Rahnella sp. WP5 | 0.68 | EX31_RS12435 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | EX31_RS24520 | | transcription-repair coupling factor | low | > 89 |
| Marinobacter adhaerens HP15 | 0.64 | HP15_2436 | | toluene tolerance ABC efflux transporter, ATP-binding protein | 0.62 | HP15_2257 | | transcription-repair-coupling factor | low | > 73 |
| Pantoea sp. MT58 | 0.64 | IAI47_17145 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | IAI47_11975 | | transcription-repair coupling factor | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS20025 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | HER17_RS08775 | | transcription-repair coupling factor | low | > 75 |
| Shewanella amazonensis SB2B | 0.64 | Sama_3081 | | ABC transporter, ATP-binding protein, putative (RefSeq) | 0.55 | Sama_1330 | | transcription-repair coupling factor (RefSeq) | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.63 | MPMX26_02741 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.52 | MPMX26_01319 | | Transcription-repair-coupling factor | low | > 36 |
| Dickeya dadantii 3937 | 0.62 | DDA3937_RS01565 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | DDA3937_RS13000 | | transcription-repair coupling factor | low | > 74 |
| Shewanella oneidensis MR-1 | 0.62 | SO3954 | | ABC transporter, ATP-binding protein, putative (NCBI ptt file) | 0.55 | SO2255 | mfd | transcription-repair coupling factor (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.62 | Shewana3_0678 | | ABC transporter related (RefSeq) | 0.55 | Shewana3_2289 | | transcription-repair coupling factor (RefSeq) | low | > 73 |
| Serratia liquefaciens MT49 | 0.61 | IAI46_22430 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.56 | IAI46_10320 | | transcription-repair coupling factor | low | > 86 |
| Dickeya dianthicola ME23 | 0.61 | DZA65_RS01545 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | DZA65_RS13530 | | transcription-repair coupling factor | 0.57 | 37 |
| Dickeya dianthicola 67-19 | 0.61 | HGI48_RS01480 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | HGI48_RS13065 | | transcription-repair coupling factor | 0.61 | 10 |
| Cupriavidus basilensis FW507-4G11 | 0.61 | RR42_RS18970 | | toluene ABC transporter ATP-binding protein | 0.48 | RR42_RS07845 | | transcription-repair coupling factor | low | > 128 |
| Vibrio cholerae E7946 ATCC 55056 | 0.61 | CSW01_12775 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.56 | CSW01_09445 | | transcription-repair coupling factor | 0.42 | 33 |
| Shewanella loihica PV-4 | 0.60 | Shew_3304 | | ABC transporter-related protein (RefSeq) | 0.55 | Shew_1630 | | transcription-repair coupling factor (RefSeq) | low | > 60 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.59 | GFF1325 | | Methionine ABC transporter ATP-binding protein | 0.49 | GFF4934 | | Transcription-repair coupling factor | low | > 90 |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00834 | | putative ABC transporter ATP-binding protein | 0.57 | MIT1002_01646 | | Transcription-repair-coupling factor | low | > 70 |
| Erwinia tracheiphila SCR3 | 0.59 | LU632_RS21245 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.54 | LU632_RS14730 | mfd | transcription-repair coupling factor | low | > 74 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_04101 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.54 | MPMX20_01795 | | Transcription-repair-coupling factor | low | > 85 |
| Dechlorosoma suillum PS | 0.59 | Dsui_1398 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.48 | Dsui_2385 | | transcription-repair coupling factor Mfd | low | > 51 |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS25230 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | BWI76_RS11205 | | transcription-repair coupling factor | low | > 92 |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_3249 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.54 | EX28DRAFT_1816 | | transcription-repair coupling factor (mfd) | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.58 | Ac3H11_4712 | | Methionine ABC transporter ATP-binding protein | 0.48 | Ac3H11_328 | | Transcription-repair coupling factor | low | > 79 |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS11885 | | ATP-binding cassette domain-containing protein | 0.56 | ABZR86_RS21210 | | transcription-repair coupling factor | low | > 74 |
| Ralstonia sp. UNC404CL21Col | 0.58 | ABZR87_RS02555 | | ABC transporter ATP-binding protein | 0.50 | ABZR87_RS13240 | | transcription-repair coupling factor | low | > 80 |
| Escherichia coli ECRC62 | 0.58 | BNILDI_01760 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | BNILDI_19160 | mfd | transcription-repair coupling factor | — | — |
| Escherichia fergusonii Becca | 0.58 | EFB2_00628 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.55 | EFB2_02861 | | Transcription-repair-coupling factor | low | > 86 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_21600 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | JDDGAC_07130 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli ECRC101 | 0.58 | OKFHMN_17975 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | OKFHMN_03470 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_16850 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | HEPCGN_24015 | mfd | transcription-repair coupling factor | 0.85 | 10 |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_10175 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | KEDOAH_24285 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_15735 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | NIAGMN_24360 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli BL21 | 0.58 | ECD_03060 | | ABC transporter maintaining OM lipid asymmetry, ATP-binding protein | 0.55 | ECD_01110 | | transcription-repair coupling factor | low | > 60 |
| Escherichia coli ECRC101 | 0.58 | MCAODC_08495 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | MCAODC_22830 | mfd | transcription-repair coupling factor | — | — |
| Escherichia coli BW25113 | 0.58 | b3195 | yrbF | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | 0.55 | b1114 | mfd | transcription-repair coupling factor (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_09775 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | NOLOHH_20995 | mfd | transcription-repair coupling factor | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_00505 | | putative phospholipid import ATP-binding protein MlaF | 0.55 | OHPLBJKB_02552 | | Transcription-repair-coupling factor | low | > 73 |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS14845 | | ABC transporter ATP-binding protein | 0.49 | RS_RS08275 | | transcription-repair coupling factor | low | > 80 |
| Variovorax sp. OAS795 | 0.57 | ABID97_RS23215 | | ABC transporter ATP-binding protein | 0.49 | ABID97_RS17285 | | transcription-repair coupling factor | 0.36 | 69 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS10335 | | ABC transporter ATP-binding protein | 0.48 | RPSI07_RS16040 | | transcription-repair coupling factor | low | > 81 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.57 | GFF2939 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.55 | GFF3397 | | Transcription-repair coupling factor | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_003712 | | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein | 0.50 | ABIE53_002095 | | transcription-repair coupling factor (superfamily II helicase) | 0.48 | 37 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.57 | H281DRAFT_05641 | | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein | 0.49 | H281DRAFT_00880 | | transcription-repair coupling factor | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS27920 | | ABC transporter ATP-binding protein | 0.49 | QEN71_RS22060 | | transcription-repair coupling factor | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS20400 | | toluene ABC transporter ATP-binding protein | 0.49 | HSERO_RS15180 | | transcription-repair coupling factor | — | — |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS17765 | | toluene ABC transporter ATP-binding protein | 0.49 | BPHYT_RS09290 | | helicase | low | > 109 |
| Rhodanobacter sp. FW510-T8 | 0.56 | OKGIIK_12135 | mlaF | ABC transporter ATP-binding protein | 0.54 | OKGIIK_09105 | mfd | transcription-repair coupling factor | low | > 52 |
| Variovorax sp. SCN45 | 0.55 | GFF5334 | | Phospholipid ABC transporter ATP-binding protein MlaF | 0.49 | GFF412 | | Transcription-repair coupling factor | low | > 127 |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS06715 | | ABC transporter ATP-binding protein | 0.49 | UW163_RS14755 | | transcription-repair coupling factor | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS06900 | | ABC transporter ATP-binding protein | 0.49 | RALBFv3_RS01445 | | transcription-repair coupling factor | low | > 76 |
| Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS11485 | | ATP-binding cassette domain-containing protein | 0.55 | LRK55_RS01815 | | transcription-repair coupling factor | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS11760 | | ATP-binding cassette domain-containing protein | 0.55 | LRK54_RS02040 | | transcription-repair coupling factor | low | > 59 |
| Lysobacter sp. OAE881 | 0.47 | ABIE51_RS01015 | | ABC transporter ATP-binding protein | 0.54 | ABIE51_RS14320 | | transcription-repair coupling factor | low | > 62 |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS11180 | | ABC transporter ATP-binding protein | 0.47 | ABCV34_RS08660 | | transcription-repair coupling factor | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.5363.1 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.53 | Xcc-8004.1775.1 | | Transcription-repair coupling factor | low | > 74 |
| Desulfovibrio vulgaris Miyazaki F | 0.34 | DvMF_0853 | | ABC transporter related (RefSeq) | 0.26 | DvMF_0285 | | transcription-repair coupling factor (RefSeq) | low | > 51 |
| Synechococcus elongatus PCC 7942 | 0.32 | Synpcc7942_0350 | | ATPase | 0.28 | Synpcc7942_1326 | mfd | transcription-repair coupling factor | low | > 38 |
Not shown: 7 genomes with orthologs for PP_0958 only; 17 genomes with orthologs for PP_2148 only