Conservation of cofitness between PP_4782 and PP_1079 in Pseudomonas putida KT2440

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4782 Phosphomethylpyrimidine kinase 1.0 PP_1079 Ornithine carbamoyltransferase 0.56 14
Pseudomonas fluorescens SBW25 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.84 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.84 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15435 hydrogenase 0.86 AO356_18275 ornithine carbamoyltransferase low > 104
Pseudomonas simiae WCS417 0.87 PS417_24600 hydrogenase 0.86 PS417_05595 ornithine carbamoyltransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_06350 hydrogenase 0.86 AO353_04155 ornithine carbamoyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1385 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.86 PfGW456L13_1739 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_4340 phosphomethylpyrimidine kinase, putative 0.82 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_4340 phosphomethylpyrimidine kinase, putative 0.82 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas sp. RS175 0.84 PFR28_03843 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.86 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic low > 88
Pseudomonas sp. S08-1 0.82 OH686_09185 Hydroxymethylpyrimidine phosphate kinase ThiD 0.79 OH686_20405 ornithine carbamoyltransferase low > 80
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2718 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.86 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 87
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_5024 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.85 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 103
Pseudomonas stutzeri RCH2 0.78 Psest_0537 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.82 Psest_1291 ornithine carbamoyltransferase — —
Dechlorosoma suillum PS 0.40 Dsui_0662 phosphomethylpyrimidine kinase 0.52 Dsui_3249 ornithine carbamoyltransferase — —
Acinetobacter radioresistens SK82 0.38 MPMX26_02438 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.62 MPMX26_01287 Ornithine carbamoyltransferase 1, anabolic — —
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS02135 phosphomethylpyrimidine kinase 0.51 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) — —
Rhizobium sp. OAE497 0.27 ABIE40_RS25930 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.46 ABIE40_RS02325 ornithine carbamoyltransferase 0.46 25
Marinobacter adhaerens HP15 0.27 HP15_349 phosphomethylpyrimidine kinase 0.66 HP15_750 ornithine carbamoyltransferase — —
Rhodospirillum rubrum S1H 0.27 Rru_A1102 Phosphomethylpyrimidine kinase (NCBI) 0.50 Rru_A3276 Ornithine carbamoyltransferase (NCBI) — —
Ralstonia solanacearum UW163 0.26 UW163_RS03675 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.50 UW163_RS08440 ornithine carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS09905 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.50 RALBFv3_RS05185 ornithine carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.26 RPSI07_RS23455 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.50 RPSI07_RS12115 ornithine carbamoyltransferase — —
Ralstonia solanacearum GMI1000 0.26 RS_RS00495 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.50 RS_RS12805 ornithine carbamoyltransferase — —
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS03470 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.15 HMPREF1078_RS10660 acetylornithine carbamoyltransferase low > 61
Bifidobacterium breve UCC2003 0.25 BBR_RS17215 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.39 BBR_RS13905 ornithine carbamoyltransferase low > 34
Agrobacterium fabrum C58 0.25 Atu3290 phosphomethylpyrimidine kinase 0.47 Atu0429 ornithine carbamoyltransferase — —
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS04830 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.51 ABZR87_RS00840 ornithine carbamoyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF249 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.50 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS08810 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.14 ABZR88_RS15495 acetylornithine carbamoyltransferase — —
Bosea sp. OAE506 0.24 ABIE41_RS21620 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.41 ABIE41_RS04335 ornithine carbamoyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS15985 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.51 A4249_RS11920 ornithine carbamoyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_0215 phosphomethylpyrimidine kinase 0.17 Echvi_3849 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) low > 79
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS00760 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.19 ABZR86_RS08730 N-acetylornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 0.23 CCNA_03331 phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase 0.46 CCNA_02325 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_03331 phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase 0.46 CCNA_02325 ornithine carbamoyltransferase — —
Azospirillum brasilense Sp245 0.23 AZOBR_RS07045 phosphomethylpyrimidine kinase 0.45 AZOBR_RS19030 ornithine carbamoyltransferase — —
Rhodopseudomonas palustris CGA009 0.22 TX73_020570 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.46 TX73_024805 ornithine carbamoyltransferase — —
Paraburkholderia graminis OAS925 0.22 ABIE53_001125 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.52 ABIE53_003354 ornithine carbamoyltransferase — —
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_03835 Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.19 OKGIIK_09480 argF N-acetylornithine carbamoyltransferase low > 52
Castellaniella sp019104865 MT123 0.22 ABCV34_RS14505 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.51 ABCV34_RS05380 ornithine carbamoyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_04811 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.52 H281DRAFT_04119 ornithine carbamoyltransferase low > 103
Magnetospirillum magneticum AMB-1 0.22 AMB_RS16155 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.47 AMB_RS01610 ornithine carbamoyltransferase — —
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1063 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.51 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Azospirillum sp. SherDot2 0.21 MPMX19_06182 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.45 MPMX19_02178 Ornithine carbamoyltransferase, anabolic — —
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU0931 thiD phosphomethylpyrimidine kinase (TIGR) 0.45 DVU1096 argF ornithine carbamoyltransferase (TIGR) — —
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_1961 hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.45 Ga0059261_3206 ornithine carbamoyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_1376 phosphomethylpyrimidine kinase (RefSeq) 0.45 DvMF_0046 ornithine carbamoyltransferase (RefSeq) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_20430 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.16 CA264_06240 acetylornithine carbamoyltransferase low > 74
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS06305 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.51 QEN71_RS02785 ornithine carbamoyltransferase — —
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS04205 kinase 0.51 BPHYT_RS15915 ornithine carbamoyltransferase low > 109
Pedobacter sp. GW460-11-11-14-LB5 0.19 CA265_RS24160 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.13 CA265_RS18520 acetylornithine carbamoyltransferase low > 88
Variovorax sp. OAS795 0.19 ABID97_RS15330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.55 ABID97_RS08630 ornithine carbamoyltransferase — —
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS01370 phosphomethylpyrimidine kinase 0.50 RR42_RS17175 ornithine carbamoyltransferase — —
Sinorhizobium meliloti 1021 0.19 SM_b20962 phoshomethylpyrimidine kinase 0.48 SMc02137 ornithine carbamoyltransferase low > 103
Dinoroseobacter shibae DFL-12 0.18 Dshi_0915 phosphomethylpyrimidine kinase (RefSeq) 0.44 Dshi_0796 ornithine carbamoyltransferase (RefSeq) low > 64
Mycobacterium tuberculosis H37Rv 0.18 Rv0422c Probable phosphomethylpyrimidine kinase ThiD (HMP-phosphate kinase) (HMP-P kinase) 0.38 Rv1656 Probable ornithine carbamoyltransferase, anabolic ArgF — —
Synechococcus elongatus PCC 7942 0.17 Synpcc7942_2379 thiD phosphomethylpyrimidine kinase 0.44 Synpcc7942_2514 argF ornithine carbamoyltransferase — —
Phaeobacter inhibens DSM 17395 0.17 PGA1_c09030 phosphomethylpyrimidine kinase ThiD 0.44 PGA1_c24220 ornithine carbamoyltransferase ArgF low > 62
Variovorax sp. SCN45 0.16 GFF2149 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.53 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) — —

Not shown: 34 genomes with orthologs for PP_4782 only; 7 genomes with orthologs for PP_1079 only