Conservation of cofitness between PP_2324 and PP_0184 in Pseudomonas putida KT2440

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 1.0 PP_0184 Argininosuccinate lyase 0.38 15
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2470 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.95 Pf6N2E2_4429 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_03200 phospho-2-dehydro-3-deoxyheptonate aldolase 0.95 AO356_12780 argininosuccinate lyase low > 104
Pseudomonas fluorescens SBW25 0.91 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.94 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.94 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas simiae WCS417 0.91 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase 0.95 PS417_27540 argininosuccinate lyase — —
Pseudomonas sp. RS175 0.91 PFR28_00962 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.96 PFR28_04367 Argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_19030 phospho-2-dehydro-3-deoxyheptonate aldolase 0.94 AO353_09000 argininosuccinate lyase low > 101
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_289 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.94 Pf1N1B4_2183 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.94 Psyr_0065 argininosuccinate lyase — —
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.94 Psyr_0065 argininosuccinate lyase — —
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_2224 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.94 PfGW456L13_854 Argininosuccinate lyase (EC 4.3.2.1) low > 87
Pseudomonas sp. S08-1 0.89 OH686_01760 3-deoxy-7-phosphoheptulonate synthase 0.91 OH686_13885 argininosuccinate lyase low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase 0.92 Psest_3751 argininosuccinate lyase — —
Marinobacter adhaerens HP15 0.73 HP15_1814 phospho-2-dehydro-3-heoxyheptonate aldolase 0.75 HP15_243 argininosuccinate lyase — —
Acinetobacter radioresistens SK82 0.69 MPMX26_01673 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.76 MPMX26_00185 Argininosuccinate lyase low > 36
Dechlorosoma suillum PS 0.62 Dsui_2381 phospho-2-dehydro-3-deoxyheptonate aldolase 0.63 Dsui_0111 argininosuccinate lyase — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_03635 3-deoxy-7-phosphoheptulonate synthase 0.43 CSW01_13360 argininosuccinate lyase low > 62
Erwinia tracheiphila SCR3 0.59 LU632_RS15450 3-deoxy-7-phosphoheptulonate synthase 0.45 LU632_RS19600 argH argininosuccinate lyase 0.56 10
Pantoea sp. MT58 0.58 IAI47_04400 3-deoxy-7-phosphoheptulonate synthase 0.44 IAI47_00920 argininosuccinate lyase low > 76
Shewanella loihica PV-4 0.58 Shew_1067 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.40 Shew_0206 argininosuccinate lyase (RefSeq) 0.57 40
Alteromonas macleodii MIT1002 0.58 MIT1002_01314 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.41 MIT1002_00467 Argininosuccinate lyase low > 70
Serratia liquefaciens MT49 0.58 IAI46_03955 3-deoxy-7-phosphoheptulonate synthase 0.45 IAI46_24500 argininosuccinate lyase 0.87 10
Pectobacterium carotovorum WPP14 0.57 HER17_RS05375 3-deoxy-7-phosphoheptulonate synthase 0.44 HER17_RS20620 argininosuccinate lyase low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS16260 3-deoxy-7-phosphoheptulonate synthase 0.44 HGI48_RS00885 argininosuccinate lyase — —
Dickeya dadantii 3937 0.57 DDA3937_RS16140 3-deoxy-7-phosphoheptulonate synthase 0.44 DDA3937_RS20340 argininosuccinate lyase — —
Dickeya dianthicola ME23 0.57 DZA65_RS17355 3-deoxy-7-phosphoheptulonate synthase 0.44 DZA65_RS00945 argininosuccinate lyase — —
Escherichia fergusonii Becca 0.57 EFB2_01291 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.45 EFB2_04654 Argininosuccinate lyase low > 86
Shewanella sp. ANA-3 0.57 Shewana3_3013 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.40 Shewana3_3901 argininosuccinate lyase (RefSeq) low > 73
Escherichia coli ECOR27 0.57 NOLOHH_12890 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.45 NOLOHH_05720 argH argininosuccinate lyase low > 57
Escherichia coli BL21 0.57 ECD_02490 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible 0.45 ECD_03845 argininosuccinate lyase low > 60
Escherichia coli ECOR38 0.57 HEPCGN_20335 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.45 HEPCGN_12220 argH argininosuccinate lyase low > 85
Enterobacter sp. TBS_079 0.57 MPMX20_03469 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.44 MPMX20_04520 Argininosuccinate lyase 0.75 10
Escherichia coli Nissle 1917 0.57 ECOLIN_RS14705 3-deoxy-7-phosphoheptulonate synthase AroF 0.45 ECOLIN_RS22855 argininosuccinate lyase low > 52
Rahnella sp. WP5 0.57 EX31_RS07595 3-deoxy-7-phosphoheptulonate synthase 0.44 EX31_RS14180 argininosuccinate lyase 0.81 37
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_01107 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.45 OHPLBJKB_04090 Argininosuccinate lyase low > 73
Escherichia coli ECRC62 0.57 BNILDI_11695 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.45 BNILDI_05805 argH argininosuccinate lyase — —
Escherichia coli ECRC102 0.57 NIAGMN_18985 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.44 NIAGMN_11325 argH argininosuccinate lyase — —
Escherichia coli ECRC98 0.57 JDDGAC_24880 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.45 JDDGAC_17200 argH argininosuccinate lyase — —
Escherichia coli BW25113 0.57 b2601 aroF 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible (NCBI) 0.45 b3960 argH argininosuccinate lyase (NCBI) 0.80 2
Escherichia coli ECRC101 0.57 OKFHMN_21215 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.45 OKFHMN_13575 argH argininosuccinate lyase — —
Escherichia coli ECRC99 0.57 KEDOAH_07005 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.45 KEDOAH_14585 argH argininosuccinate lyase — —
Escherichia coli ECRC101 0.57 MCAODC_11745 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.45 MCAODC_04075 argH argininosuccinate lyase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF4176 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.44 GFF2346 Argininosuccinate lyase (EC 4.3.2.1) low > 78
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2702 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.44 EX28DRAFT_4422 argininosuccinate lyase 0.77 20
Klebsiella michiganensis M5al 0.56 BWI76_RS21480 phospho-2-dehydro-3-deoxyheptonate aldolase 0.44 BWI76_RS00855 argininosuccinate lyase 0.66 29
Shewanella oneidensis MR-1 0.56 SO1361 aroF phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (NCBI ptt file) 0.41 SO0279 argH argininosuccinate lyase (NCBI ptt file) 0.74 30
Shewanella amazonensis SB2B 0.54 Sama_0893 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.42 Sama_0260 argininosuccinate lyase (RefSeq) 0.76 37
Synechococcus elongatus PCC 7942 0.53 Synpcc7942_2501 aroF phospho-2-dehydro-3-heoxyheptonate aldolase 0.47 Synpcc7942_2475 argH argininosuccinate lyase — —
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_1384 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.20 B158DRAFT_1980 argininosuccinate lyase low > 40
Acidovorax sp. GW101-3H11 0.48 Ac3H11_4034 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.61 Ac3H11_1632 Argininosuccinate lyase (EC 4.3.2.1) — —
Variovorax sp. SCN45 0.48 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) 0.62 GFF3824 Argininosuccinate lyase (EC 4.3.2.1) — —
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS07160 phospho-2-dehydro-3-deoxyheptonate aldolase 0.63 HSERO_RS14685 argininosuccinate lyase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.61 GFF736 Argininosuccinate lyase (EC 4.3.2.1) — —
Variovorax sp. OAS795 0.47 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase 0.63 ABID97_RS08190 argininosuccinate lyase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS12955 3-deoxy-7-phosphoheptulonate synthase 0.63 RALBFv3_RS04280 argininosuccinate lyase — —
Ralstonia solanacearum UW163 0.47 UW163_RS00610 3-deoxy-7-phosphoheptulonate synthase 0.63 UW163_RS09390 argininosuccinate lyase — —
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase 0.19 OKGIIK_09430 argH argininosuccinate lyase low > 52
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.63 RR42_RS15925 argininosuccinate lyase — —
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 0.19 Xcc-8004.2323.1 Argininosuccinate lyase (EC 4.3.2.1) low > 74
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase 0.20 ABZR86_RS08695 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.58 41
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS12205 3-deoxy-7-phosphoheptulonate synthase 0.64 ABZR87_RS16170 argininosuccinate lyase low > 80
Ralstonia solanacearum GMI1000 0.46 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase 0.63 RS_RS11865 argininosuccinate lyase — —
Ralstonia solanacearum PSI07 0.46 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase 0.62 RPSI07_RS13080 argininosuccinate lyase — —
Paraburkholderia graminis OAS925 0.46 ABIE53_003992 3-deoxy-7-phosphoheptulonate synthase 0.63 ABIE53_001311 argininosuccinate lyase — —
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG 0.61 QEN71_RS24970 argininosuccinate lyase 0.37 128
Rhodopseudomonas palustris CGA009 0.45 TX73_000140 3-deoxy-7-phosphoheptulonate synthase 0.47 TX73_024645 argininosuccinate lyase — —
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS23245 phospho-2-dehydro-3-deoxyheptonate aldolase 0.63 BPHYT_RS05210 argininosuccinate lyase — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_01349 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.63 H281DRAFT_00194 argininosuccinate lyase low > 103
Caulobacter crescentus NA1000 0.45 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.51 CCNA_02294 argininosuccinate lyase — —
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.51 CCNA_02294 argininosuccinate lyase — —
Bifidobacterium breve UCC2003 0.44 BBR_RS19195 3-deoxy-7-phosphoheptulonate synthase 0.36 BBR_RS13955 argininosuccinate lyase low > 34
Castellaniella sp019104865 MT123 0.43 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG 0.61 ABCV34_RS03060 argininosuccinate lyase — —

Not shown: 2 genomes with orthologs for PP_2324 only; 28 genomes with orthologs for PP_0184 only