Conservation of cofitness between PP_2032 and PP_0066 in Pseudomonas putida KT2440

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2032 putative ATPase 1.0 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.53 16
Pseudomonas syringae pv. syringae B728a ΔmexB 0.98 Psyr_1721 moxR protein, putative 0.82 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.98 Psyr_1721 moxR protein, putative 0.82 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas simiae WCS417 0.98 PS417_15085 ATPase AAA 0.83 PS417_00085 16S rRNA methyltransferase low > 88
Pseudomonas fluorescens SBW25 0.98 PFLU_RS17105 MoxR family ATPase 0.83 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS17105 MoxR family ATPase 0.83 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_625 MoxR-like ATPase in aerotolerance operon 0.84 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_24665 AAA family ATPase 0.84 AO356_11275 16S rRNA methyltransferase low > 104
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_4640 MoxR-like ATPase in aerotolerance operon 0.83 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.31 61
Pseudomonas sp. RS175 0.97 PFR28_01595 hypothetical protein 0.83 PFR28_04663 Ribosomal RNA small subunit methyltransferase B low > 88
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_23735 AAA family ATPase 0.83 AO353_10630 16S rRNA methyltransferase 0.29 81
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_3300 MoxR-like ATPase in aerotolerance operon 0.83 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas sp. S08-1 0.95 OH686_22255 MoxR-like ATPase in aerotolerance operon 0.73 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase low > 80
Pseudomonas stutzeri RCH2 0.94 Psest_1943 MoxR-like ATPases 0.80 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB low > 67
Alteromonas macleodii MIT1002 0.69 MIT1002_01285 magnesium chelatase ATPase subunit D 0.36 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B low > 70
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_1006 MoxR-like ATPases 0.38 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB low > 40
Marinobacter adhaerens HP15 0.67 HP15_2270 magnesium chelatase subunit I 0.42 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase low > 73
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_14865 MoxR family ATPase 0.46 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 62
Shewanella sp. ANA-3 0.65 Shewana3_1459 ATPase (RefSeq) 0.41 Shewana3_0033 sun protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.65 SO3090 MoxR domain protein (NCBI ptt file) 0.40 SO0030 sun sun protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.65 Shew_2427 ATPase (RefSeq) 0.40 Shew_3738 sun protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.64 Sama_2169 MoxR domain-containing protein (RefSeq) 0.41 Sama_0041 sun protein (RefSeq) 0.48 33
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS11785 MoxR family ATPase 0.38 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 74
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS11860 MoxR family ATPase 0.35 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 59
Rhodanobacter denitrificans MT42 0.63 LRK55_RS11585 MoxR family ATPase 0.34 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 63
Lysobacter sp. OAE881 0.63 ABIE51_RS17160 MoxR family ATPase 0.37 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 62
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_12035 moxR AAA family ATPase 0.37 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 52
Dinoroseobacter shibae DFL-12 0.59 Dshi_3113 ATPase associated with various cellular activities AAA_3 (RefSeq) 0.19 Dshi_3033 Fmu (Sun) domain protein (RefSeq) low > 64
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.1188.1 MoxR-like ATPase in aerotolerance operon 0.32 Xcc-8004.4741.1 hypothetical protein low > 74
Azospirillum brasilense Sp245 0.58 AZOBR_RS24360 ATPase AAA 0.21 AZOBR_RS00235 MFS transporter low > 97
Acidovorax sp. GW101-3H11 0.44 Ac3H11_1739 MoxR-like ATPase in aerotolerance operon 0.25 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF3384 MoxR-like ATPase in aerotolerance operon 0.28 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 90
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_02917 AAA-family ATPase 0.20 CCNA_00101 16S rRNA m5C methyltransferase RsmB low > 67
Caulobacter crescentus NA1000 0.40 CCNA_02917 AAA-family ATPase 0.20 CCNA_00101 16S rRNA m5C methyltransferase RsmB low > 66
Rhodospirillum rubrum S1H 0.39 Rru_A0369 ATPase associated with various cellular activities, AAA_3 (NCBI) 0.19 Rru_A3660 tRNA and rRNA cytosine-C5-methylase (NCBI) low > 58
Dechlorosoma suillum PS 0.38 Dsui_0999 MoxR-like ATPase 0.33 Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB low > 51
Rhodopseudomonas palustris CGA009 0.36 TX73_006080 MoxR family ATPase 0.20 TX73_000155 transcription antitermination factor NusB low > 86
Rhizobium sp. OAE497 0.36 ABIE40_RS13255 MoxR family ATPase 0.19 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase — —
Agrobacterium fabrum C58 0.35 Atu2253 MoxR family protein 0.20 Atu2825 Sun protein — —
Magnetospirillum magneticum AMB-1 0.35 AMB_RS21060 MoxR family ATPase 0.20 AMB_RS00745 MFS transporter low > 64
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_3934 MoxR-like ATPases 0.16 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases low > 68
Sinorhizobium meliloti 1021 0.34 SMc02703 hypothetical protein 0.18 SMc04090 sun protein — —
Azospirillum sp. SherDot2 0.34 MPMX19_01142 hypothetical protein 0.20 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B low > 112
Ralstonia solanacearum GMI1000 0.32 RS_RS17675 MoxR family ATPase 0.31 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 80
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS16695 MoxR family ATPase 0.33 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 80
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS36135 ATPase AAA 0.27 RR42_RS20450 16S rRNA methyltransferase 0.33 7
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS22875 MoxR family ATPase 0.32 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 76
Ralstonia solanacearum UW163 0.32 UW163_RS23495 MoxR family ATPase 0.32 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB — —
Ralstonia solanacearum PSI07 0.32 RPSI07_RS00345 MoxR family ATPase 0.33 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 81
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_1879 moxR MoxR protein-like 0.23 Synpcc7942_0962 sun sun protein low > 38
Acinetobacter radioresistens SK82 0.29 MPMX26_01070 hypothetical protein 0.37 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c31820 putative ATPase 0.19 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B low > 62
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS14355 MoxR family ATPase 0.28 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 153
Paraburkholderia graminis OAS925 0.21 ABIE53_005523 MoxR-like ATPase 0.29 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_01291 MoxR-like ATPase 0.29 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase low > 103

Not shown: 15 genomes with orthologs for PP_2032 only; 32 genomes with orthologs for PP_0066 only