Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECRC100 | 1.0 | OKFHMN_22860 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 1.0 | OKFHMN_08380 | cyoE | heme o synthase | 0.74 | 14 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_20630 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 1.00 | NIAGMN_06435 | cyoE | heme o synthase | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_13900 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 1.00 | MCAODC_27605 | cyoE | heme o synthase | 0.74 | 26 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_14480 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 1.00 | NOLOHH_01315 | cyoE | heme o synthase | low | > 75 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_26825 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 1.00 | JDDGAC_12035 | cyoE | heme o synthase | low | > 86 |
Escherichia coli ECRC62 | 1.00 | BNILDI_13400 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 1.00 | BNILDI_22730 | cyoE | heme o synthase | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_01422 | | NADH-quinone oxidoreductase subunit F | 1.00 | OHPLBJKB_03245 | | Protoheme IX farnesyltransferase | low | > 73 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_05335 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 1.00 | KEDOAH_19585 | cyoE | heme o synthase | — | — |
Escherichia coli ECOR38 | 1.00 | HEPCGN_22065 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 1.00 | HEPCGN_06995 | cyoE | heme o synthase | 0.62 | 69 |
Escherichia coli BW25113 | 1.00 | b2284 | nuoF | NADH:ubiquinone oxidoreductase, chain F (NCBI) | 1.00 | b0428 | cyoE | protoheme IX farnesyltransferase (NCBI) | 0.64 | 17 |
Escherichia coli BL21 | 1.00 | ECD_02209 | | NADH:ubiquinone oxidoreductase, chain F | 1.00 | ECD_00379 | | protoheme IX farnesyltransferase | low | > 61 |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS13265 | | NADH-quinone oxidoreductase subunit NuoF | 1.00 | ECOLIN_RS02575 | | heme o synthase | 0.82 | 15 |
Escherichia fergusonii Becca | 1.00 | EFB2_01575 | | NADH-quinone oxidoreductase subunit F | 1.00 | EFB2_03629 | | Protoheme IX farnesyltransferase | low | > 86 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.99 | GFF1887 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | 0.96 | GFF4342 | | Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB | 0.68 | 31 |
Klebsiella michiganensis M5al | 0.96 | BWI76_RS20170 | | NADH-quinone oxidoreductase subunit F | 0.95 | BWI76_RS06475 | | protoheme IX farnesyltransferase | 0.49 | 28 |
Enterobacter asburiae PDN3 | 0.96 | EX28DRAFT_0325 | | NADH-quinone oxidoreductase, F subunit | 0.95 | EX28DRAFT_2543 | | protoheme IX farnesyltransferase | low | > 76 |
Enterobacter sp. TBS_079 | 0.96 | MPMX20_03214 | | NADH-quinone oxidoreductase subunit F | 0.94 | MPMX20_01019 | | Protoheme IX farnesyltransferase | low | > 85 |
Serratia liquefaciens MT49 | 0.91 | IAI46_17690 | | NADH-quinone oxidoreductase subunit NuoF | 0.87 | IAI46_04965 | | protoheme IX farnesyltransferase | 0.64 | 5 |
Pantoea sp. MT58 | 0.91 | IAI47_06380 | | NADH-quinone oxidoreductase subunit NuoF | 0.86 | IAI47_14700 | | protoheme IX farnesyltransferase | 0.61 | 26 |
Erwinia tracheiphila SCR3 | 0.90 | LU632_RS07985 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 0.87 | LU632_RS18395 | cyoE | heme o synthase | — | — |
Pectobacterium carotovorum WPP14 | 0.89 | HER17_RS07145 | | NADH-quinone oxidoreductase subunit NuoF | 0.84 | HER17_RS15895 | | heme o synthase | — | — |
Rahnella sp. WP5 | 0.89 | EX31_RS19415 | | NADH-quinone oxidoreductase subunit NuoF | 0.82 | EX31_RS22200 | | protoheme IX farnesyltransferase | 0.78 | 9 |
Dickeya dadantii 3937 | 0.88 | DDA3937_RS14315 | | NADH-quinone oxidoreductase subunit NuoF | 0.83 | DDA3937_RS05595 | | protoheme IX farnesyltransferase | — | — |
Dickeya dianthicola 67-19 | 0.88 | HGI48_RS14290 | | NADH-quinone oxidoreductase subunit NuoF | 0.83 | HGI48_RS05640 | | protoheme IX farnesyltransferase | — | — |
Dickeya dianthicola ME23 | 0.88 | DZA65_RS14965 | | NADH-quinone oxidoreductase subunit NuoF | 0.83 | DZA65_RS05965 | | protoheme IX farnesyltransferase | — | — |
Shewanella oneidensis MR-1 | 0.80 | SO1017 | nuoF | NADH dehydrogenase I, F subunit (NCBI ptt file) | 0.29 | SO4614 | ctaB | protoheme IX farnesyltransferase (NCBI ptt file) | low | > 76 |
Pseudomonas syringae pv. syringae B728a | 0.77 | Psyr_3201 | | NADH dehydrogenase subunit F | 0.68 | Psyr_1145 | | Protoheme IX farnesyltransferase | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.77 | Psyr_3201 | | NADH dehydrogenase subunit F | 0.68 | Psyr_1145 | | Protoheme IX farnesyltransferase | — | — |
Pseudomonas putida KT2440 | 0.76 | PP_4123 | | NADH-quinone oxidoreductase subunit F | 0.66 | PP_0816 | | protoheme IX farnesyltransferase | — | — |
Pseudomonas fluorescens SBW25 | 0.76 | PFLU_RS18635 | | NADH-quinone oxidoreductase subunit NuoF | 0.67 | PFLU_RS25200 | | protoheme IX farnesyltransferase | low | > 109 |
Pseudomonas simiae WCS417 | 0.76 | PS417_16595 | | NADH dehydrogenase | 0.67 | PS417_23370 | | protoheme IX farnesyltransferase | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.76 | PFLU_RS18635 | | NADH-quinone oxidoreductase subunit NuoF | 0.67 | PFLU_RS25200 | | protoheme IX farnesyltransferase | low | > 109 |
Pseudomonas sp. RS175 | 0.75 | PFR28_02631 | | NADH-quinone oxidoreductase subunit F | 0.66 | PFR28_00246 | | Protoheme IX farnesyltransferase | — | — |
Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_2629 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | 0.67 | PfGW456L13_4932 | | Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.75 | AO353_27760 | | NADH dehydrogenase | 0.67 | AO353_15470 | | protoheme IX farnesyltransferase | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_4037 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | 0.66 | Pf1N1B4_969 | | Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.75 | Pf6N2E2_273 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | 0.66 | Pf6N2E2_5321 | | Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.75 | AO356_22050 | | NADH dehydrogenase | 0.66 | AO356_16980 | | protoheme IX farnesyltransferase | — | — |
Acinetobacter radioresistens SK82 | 0.62 | MPMX26_02551 | | NADH-quinone oxidoreductase subunit F | 0.47 | MPMX26_01158 | | Protoheme IX farnesyltransferase | — | — |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.56 | CA264_04250 | | NADH oxidoreductase (quinone) subunit F | 0.13 | CA264_01325 | | protoheme IX farnesyltransferase | — | — |
Sinorhizobium meliloti 1021 | 0.45 | SMa1525 | | NuoF2 NADH I chain F | 0.19 | SMc00450 | | protoheme IX farnesyltransferase | low | > 103 |
Rhodopseudomonas palustris CGA009 | 0.41 | TX73_022070 | | NADH-quinone oxidoreductase subunit F | 0.19 | TX73_004295 | | heme o synthase | low | > 86 |
Kangiella aquimarina DSM 16071 | 0.40 | B158DRAFT_0122 | | NADH-quinone oxidoreductase, F subunit | 0.25 | B158DRAFT_0671 | | protoheme IX farnesyltransferase | low | > 40 |
Castellaniella sp019104865 MT123 | 0.38 | ABCV34_RS08725 | | NADH-quinone oxidoreductase subunit NuoF | 0.23 | ABCV34_RS13230 | | heme o synthase | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.38 | CA265_RS23555 | | NADH-quinone oxidoreductase subunit F | 0.14 | CA265_RS17805 | | protoheme IX farnesyltransferase | — | — |
Dinoroseobacter shibae DFL-12 | 0.37 | Dshi_1316 | | NADH-quinone oxidoreductase, F subunit (RefSeq) | 0.16 | Dshi_1141 | | protoheme IX farnesyltransferase (RefSeq) | — | — |
Azospirillum brasilense Sp245 | 0.37 | AZOBR_RS07190 | | NADH dehydrogenase | 0.21 | AZOBR_RS10580 | | protoheme IX farnesyltransferase | — | — |
Paraburkholderia graminis OAS925 | 0.37 | ABIE53_001595 | | NADH-quinone oxidoreductase subunit F | 0.25 | ABIE53_000683 | | protoheme IX farnesyltransferase | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_04572 | | NADH dehydrogenase subunit F | 0.26 | H281DRAFT_01985 | | protoheme IX farnesyltransferase | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.37 | Ga0059261_0704 | | NADH-quinone oxidoreductase, F subunit | 0.19 | Ga0059261_2005 | | protoheme IX farnesyltransferase | — | — |
Variovorax sp. SCN45 | 0.37 | GFF4755 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | 0.27 | GFF2307 | | Heme O synthase, protoheme IX farnesyltransferase, COX10-CtaB | — | — |
Lysobacter sp. OAE881 | 0.37 | ABIE51_RS08335 | | NADH-quinone oxidoreductase subunit NuoF | 0.24 | ABIE51_RS19165 | | heme o synthase | — | — |
Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS08845 | | NADH dehydrogenase | 0.24 | HSERO_RS20745 | | protoheme IX farnesyltransferase | — | — |
Cupriavidus basilensis FW507-4G11 | 0.37 | RR42_RS05535 | | NADH dehydrogenase | 0.24 | RR42_RS01920 | | protoheme IX farnesyltransferase | — | — |
Burkholderia phytofirmans PsJN | 0.37 | BPHYT_RS06650 | | NADH dehydrogenase | 0.26 | BPHYT_RS02690 | | protoheme IX farnesyltransferase | — | — |
Variovorax sp. OAS795 | 0.37 | ABID97_RS20470 | | NADH-quinone oxidoreductase subunit NuoF | 0.28 | ABID97_RS23915 | | heme o synthase | — | — |
Azospirillum sp. SherDot2 | 0.37 | MPMX19_01741 | | NADH-quinone oxidoreductase subunit F | 0.21 | MPMX19_00886 | | Protoheme IX farnesyltransferase | — | — |
Bosea sp. OAE506 | 0.36 | ABIE41_RS17925 | | NADH-quinone oxidoreductase subunit NuoF | 0.20 | ABIE41_RS22955 | | heme o synthase | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.36 | GFF3686 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | 0.26 | GFF698 | | Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB | 0.63 | 44 |
Phaeobacter inhibens DSM 17395 | 0.36 | PGA1_c10430 | | NADH-quinone oxidoreductase subunit F | 0.17 | PGA1_c06260 | | protoheme IX farnesyltransferase CtaB | — | — |
Ralstonia solanacearum IBSBF1503 | 0.36 | RALBFv3_RS02950 | | NADH-quinone oxidoreductase subunit F | 0.24 | RALBFv3_RS10990 | | protoheme IX farnesyltransferase | — | — |
Ralstonia solanacearum UW163 | 0.36 | UW163_RS10775 | | NADH-quinone oxidoreductase subunit F | 0.24 | UW163_RS02590 | | protoheme IX farnesyltransferase | — | — |
Rhodanobacter denitrificans MT42 | 0.36 | LRK55_RS00880 | | NADH-quinone oxidoreductase subunit NuoF | 0.25 | LRK55_RS06825 | | heme o synthase | — | — |
Ralstonia solanacearum GMI1000 | 0.36 | RS_RS10320 | | NADH-quinone oxidoreductase subunit F | 0.24 | RS_RS01830 | | protoheme IX farnesyltransferase | — | — |
Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_1447 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | 0.25 | Ac3H11_3883 | | Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB | — | — |
Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS14855 | | NADH-quinone oxidoreductase subunit NuoF | 0.24 | ABZR87_RS06845 | | heme o synthase | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.36 | A4249_RS06390 | | NADH-quinone oxidoreductase subunit NuoF | 0.21 | A4249_RS00115 | | heme o synthase | — | — |
Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_05790 | nuoF | NADH-quinone oxidoreductase subunit NuoF | 0.26 | OKGIIK_16555 | cyoE | heme o synthase | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.36 | LRK54_RS01105 | | NADH-quinone oxidoreductase subunit NuoF | 0.25 | LRK54_RS07085 | | heme o synthase | — | — |
Rhizobium sp. OAE497 | 0.36 | ABIE40_RS07205 | | NADH-quinone oxidoreductase subunit NuoF | 0.21 | ABIE40_RS04070 | | heme o synthase | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.36 | ABZR86_RS06090 | | NADH-quinone oxidoreductase subunit NuoF | 0.28 | ABZR86_RS12895 | | heme o synthase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.35 | QEN71_RS24125 | | NADH-quinone oxidoreductase subunit NuoF | 0.26 | QEN71_RS01545 | | heme o synthase | — | — |
Ralstonia solanacearum PSI07 | 0.35 | RPSI07_RS14360 | | NADH-quinone oxidoreductase subunit F | 0.24 | RPSI07_RS22315 | | protoheme IX farnesyltransferase | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.35 | Xcc-8004.1988.1 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | 0.23 | Xcc-8004.4836.1 | | Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA | — | — |
Caulobacter crescentus NA1000 Δfur | 0.35 | CCNA_02024 | | NADH-quinone oxidoreductase chain F | 0.20 | CCNA_03516 | | protoheme IX farnesyltransferase coxE | — | — |
Caulobacter crescentus NA1000 | 0.35 | CCNA_02024 | | NADH-quinone oxidoreductase chain F | 0.20 | CCNA_03516 | | protoheme IX farnesyltransferase coxE | — | — |
Agrobacterium fabrum C58 | 0.35 | Atu1275 | | NADH ubiquinone oxidoreductase chain F | 0.18 | Atu0769 | | protoheme IX farnesyltransferase | — | — |
Not shown: 6 genomes with orthologs for OKFHMN_22860 only; 8 genomes with orthologs for OKFHMN_08380 only