Conservation of cofitness between NOLOHH_15310 and NOLOHH_07470 in Escherichia coli ECOR27

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_15310 apbC iron-sulfur cluster carrier protein ApbC 1.0 NOLOHH_07470 rph ribonuclease PH 0.69 5
Escherichia coli ECRC98 1.00 JDDGAC_28120 apbC iron-sulfur cluster carrier protein ApbC 1.00 JDDGAC_19215 rph ribonuclease PH low > 86
Escherichia coli ECRC101 1.00 MCAODC_21150 apbC iron-sulfur cluster carrier protein ApbC 1.00 MCAODC_06100 rph ribonuclease PH low > 87
Escherichia coli ECRC102 1.00 NIAGMN_21955 apbC iron-sulfur cluster carrier protein ApbC 1.00 NIAGMN_13350 rph ribonuclease PH — —
Escherichia coli ECRC99 1.00 KEDOAH_04155 apbC iron-sulfur cluster carrier protein ApbC 1.00 KEDOAH_12555 rph ribonuclease PH — —
Escherichia coli BW25113 1.00 b2113 mrp putative ATPase (VIMSS) 0.93 b3643 rph ribonuclease PH (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_01743 Iron-sulfur cluster carrier protein 1.00 EFB2_00170 Ribonuclease PH low > 86
Escherichia coli ECOR38 1.00 HEPCGN_02710 apbC iron-sulfur cluster carrier protein ApbC 1.00 HEPCGN_14410 rph ribonuclease PH low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01597 Iron-sulfur cluster carrier protein 1.00 OHPLBJKB_00059 Ribonuclease PH low > 73
Escherichia coli BL21 1.00 ECD_02043 antiporter inner membrane protein 1.00 ECD_03500 ribonuclease PH low > 61
Escherichia coli ECRC62 1.00 BNILDI_14260 apbC iron-sulfur cluster carrier protein ApbC 1.00 BNILDI_04045 rph ribonuclease PH low > 75
Escherichia coli ECRC100 1.00 OKFHMN_24010 apbC iron-sulfur cluster carrier protein ApbC 1.00 OKFHMN_15590 rph ribonuclease PH 0.63 32
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12390 iron-sulfur cluster carrier protein ApbC 1.00 ECOLIN_RS20755 ribonuclease PH low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3825 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like 0.92 GFF366 Ribonuclease PH (EC 2.7.7.56) low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS19420 Fe-S-binding ATPase 0.92 BWI76_RS27390 ribonuclease PH low > 92
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0440 ATPases involved in chromosome partitioning 0.91 EX28DRAFT_3893 ribonuclease PH low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03089 Iron-sulfur cluster carrier protein 0.92 MPMX20_00092 Ribonuclease PH low > 85
Pantoea sp. MT58 0.84 IAI47_06780 iron-sulfur cluster carrier protein ApbC 0.87 IAI47_00595 ribonuclease PH low > 76
Dickeya dadantii 3937 0.83 DDA3937_RS06685 iron-sulfur cluster carrier protein ApbC 0.89 DDA3937_RS20540 ribonuclease PH low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS07055 iron-sulfur cluster carrier protein ApbC 0.89 DZA65_RS00730 ribonuclease PH low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS06700 iron-sulfur cluster carrier protein ApbC 0.89 HGI48_RS00675 ribonuclease PH low > 71
Pectobacterium carotovorum WPP14 0.81 HER17_RS14655 iron-sulfur cluster carrier protein ApbC 0.85 HER17_RS20855 ribonuclease PH low > 75
Serratia liquefaciens MT49 0.81 IAI46_07965 iron-sulfur cluster carrier protein ApbC 0.87 IAI46_24850 ribonuclease PH low > 86
Rahnella sp. WP5 0.77 EX31_RS11550 iron-sulfur cluster carrier protein ApbC 0.85 EX31_RS14505 ribonuclease PH low > 89
Erwinia tracheiphila SCR3 0.76 LU632_RS08575 apbC iron-sulfur cluster carrier protein ApbC 0.86 LU632_RS22020 rph ribonuclease PH low > 74
Marinobacter adhaerens HP15 0.51 HP15_1293 iron sulfur binding protein 0.70 HP15_300 ribonuclease PH low > 73
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_05270 iron-sulfur cluster carrier protein ApbC 0.77 CSW01_01115 ribonuclease PH low > 62
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_00157 ATP-binding protein involved in chromosome partitioning 0.64 H281DRAFT_04008 RNAse PH — —
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS04965 ATP-binding protein 0.64 BPHYT_RS15325 ribonuclease PH low > 109
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS25015 iron-sulfur cluster carrier protein ApbC 0.65 QEN71_RS03645 ribonuclease PH — —
Paraburkholderia graminis OAS925 0.47 ABIE53_001267 ATP-binding protein involved in chromosome partitioning 0.64 ABIE53_003234 ribonuclease PH — —
Shewanella oneidensis MR-1 0.47 SO2618 ATP-binding protein, Mrp/Nbp35 family (NCBI ptt file) 0.76 SO4256 rph ribonuclease PH (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.46 Shewana3_1761 ATP-binding Mrp/Nbp35 family protein (RefSeq) 0.76 Shewana3_3777 RNAse PH (RefSeq) low > 73
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS16010 ATP-binding protein 0.64 RR42_RS04890 ribonuclease PH — —
Shewanella amazonensis SB2B 0.46 Sama_2048 ATP-binding Mrp/Nbp35 family protein (RefSeq) 0.77 Sama_0320 tRNA nucleotidyltransferase (RefSeq) low > 62
Ralstonia solanacearum PSI07 0.45 RPSI07_RS12975 iron-sulfur cluster carrier protein ApbC 0.64 RPSI07_RS13840 ribonuclease PH — —
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS16250 iron-sulfur cluster carrier protein ApbC 0.65 ABZR87_RS15255 ribonuclease PH low > 80
Ralstonia solanacearum UW163 0.45 UW163_RS09275 iron-sulfur cluster carrier protein ApbC 0.64 UW163_RS10375 ribonuclease PH — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS04395 iron-sulfur cluster carrier protein ApbC 0.64 RALBFv3_RS03345 ribonuclease PH — —
Ralstonia solanacearum GMI1000 0.45 RS_RS11945 iron-sulfur cluster carrier protein ApbC 0.64 RS_RS10830 ribonuclease PH — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS15465 ATP-binding protein 0.64 HSERO_RS10655 ribonuclease PH — —
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_2380 ATPases involved in chromosome partitioning 0.70 B158DRAFT_0588 ribonuclease PH — —
Shewanella loihica PV-4 0.44 Shew_1574 ATP-binding Mrp/Nbp35 family protein (RefSeq) 0.77 Shew_3488 ribonuclease PH (RefSeq) low > 60
Dechlorosoma suillum PS 0.44 Dsui_1247 ATPase involved in chromosome partitioning 0.68 Dsui_0494 ribonuclease PH — —
Castellaniella sp019104865 MT123 0.44 ABCV34_RS08920 iron-sulfur cluster carrier protein ApbC 0.61 ABCV34_RS03515 ribonuclease PH — —
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_731 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like 0.69 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) low > 87
Variovorax sp. OAS795 0.44 ABID97_RS07500 iron-sulfur cluster carrier protein ApbC 0.63 ABID97_RS23640 ribonuclease PH low > 91
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_3885 ParA family protein 0.69 Psyr_0213 RNAse PH — —
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_3885 ParA family protein 0.69 Psyr_0213 RNAse PH — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_04050 ATP-binding protein 0.69 AO353_09260 ribonuclease PH — —
Pseudomonas sp. RS175 0.43 PFR28_03342 Iron-sulfur cluster carrier protein 0.69 PFR28_04420 Ribonuclease PH — —
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_5602 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like 0.69 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) — —
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_18380 ATP-binding protein 0.69 AO356_12500 ribonuclease PH — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF1207 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like 0.66 GFF3254 Ribonuclease PH (EC 2.7.7.56) — —
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1760 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like 0.69 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) — —
Alteromonas macleodii MIT1002 0.42 MIT1002_02490 Flagellum site-determining protein YlxH 0.75 MIT1002_04071 Ribonuclease PH low > 70
Pseudomonas putida KT2440 0.42 PP_1098 ATP-dependent Fe-S cluster transferase 0.69 PP_5294 Ribonuclease PH — —
Pseudomonas stutzeri RCH2 0.42 Psest_3046 ATPases involved in chromosome partitioning 0.70 Psest_3813 ribonuclease PH — —
Pseudomonas fluorescens SBW25 0.42 PFLU_RS05755 iron-sulfur cluster carrier protein ApbC 0.68 PFLU_RS29490 ribonuclease PH — —
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3814 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like 0.60 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) — —
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS05755 iron-sulfur cluster carrier protein ApbC 0.68 PFLU_RS29490 ribonuclease PH — —
Pseudomonas simiae WCS417 0.41 PS417_05670 ATP-binding protein 0.68 PS417_27810 ribonuclease PH — —
Pseudomonas sp. S08-1 0.41 OH686_03855 [4Fe-4S] cluster assembly scaffold protein Mrp (ApbC) 0.71 OH686_13570 ribonuclease PH — —
Sinorhizobium meliloti 1021 0.39 SMc00876 ATP-binding MRP protein 0.60 SMc01144 ribonuclease PH low > 103
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_1105 mrp MRP protein-like 0.51 Synpcc7942_1073 rph ribonuclease PH — —
Phaeobacter inhibens DSM 17395 0.38 PGA1_c27720 ATPases involved in chromosome partitioning 0.57 PGA1_c35030 ribonuclease PH low > 62
Rhizobium sp. OAE497 0.37 ABIE40_RS05295 iron-sulfur cluster carrier protein ApbC 0.60 ABIE40_RS01640 ribonuclease PH — —
Rhodospirillum rubrum S1H 0.36 Rru_A2204 Protein of unknown function DUF59 (NCBI) 0.59 Rru_A3641 Ribonuclease PH (NCBI) — —
Bifidobacterium breve UCC2003 0.22 BBR_RS13820 ATP-binding protein 0.52 BBR_RS12405 ribonuclease PH low > 34
Mycobacterium tuberculosis H37Rv 0.21 Rv1229c Probable Mrp-related protein Mrp 0.55 Rv1340 Probable ribonuclease RphA (RNase PH) (tRNA nucleotidyltransferase) — —

Not shown: 4 genomes with orthologs for NOLOHH_15310 only; 19 genomes with orthologs for NOLOHH_07470 only