| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Serratia liquefaciens MT49 | 1.0 | IAI46_01600 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 1.0 | IAI46_19450 | | nitrogen regulatory protein P-II | 0.49 | 5 |
| Rahnella sp. WP5 | 0.70 | EX31_RS08845 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.99 | EX31_RS20610 | | nitrogen regulatory protein P-II | low | > 89 |
| Escherichia coli BW25113 | 0.67 | b4167 | yjeF | predicted carbohydrate kinase (NCBI) | 0.94 | b2553 | glnB | regulatory protein P-II for glutamine synthetase (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.67 | ECD_04034 | | bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase | 0.94 | ECD_02445 | | regulatory protein P-II for glutamine synthetase | low | > 60 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_3364 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.95 | EX28DRAFT_0097 | | nitrogen regulatory protein P-II family | low | > 76 |
| Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS24205 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | ECOLIN_RS14450 | | nitrogen regulatory protein P-II | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_03875 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.94 | OHPLBJKB_01154 | | Nitrogen regulatory protein P-II 1 | low | > 73 |
| Escherichia coli ECOR27 | 0.67 | NOLOHH_04545 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | NOLOHH_13175 | glnB | nitrogen regulatory protein P-II | — | — |
| Escherichia coli ECRC62 | 0.67 | BNILDI_06945 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | BNILDI_11975 | glnB | nitrogen regulatory protein P-II | — | — |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_15875 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | KEDOAH_06720 | glnB | nitrogen regulatory protein P-II | — | — |
| Escherichia coli ECRC101 | 0.66 | OKFHMN_12280 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | OKFHMN_21500 | glnB | nitrogen regulatory protein P-II | — | — |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_15920 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | JDDGAC_25165 | glnB | nitrogen regulatory protein P-II | — | — |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_10130 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | NIAGMN_19270 | glnB | nitrogen regulatory protein P-II | — | — |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_00448 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.95 | MPMX20_03422 | | Nitrogen regulatory protein P-II | low | > 85 |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_10510 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | HEPCGN_20645 | glnB | nitrogen regulatory protein P-II | low | > 85 |
| Escherichia coli ECRC101 | 0.66 | MCAODC_02795 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | MCAODC_12030 | glnB | nitrogen regulatory protein P-II | — | — |
| Escherichia fergusonii Becca | 0.66 | EFB2_04368 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.94 | EFB2_01343 | | Nitrogen regulatory protein P-II 1 | 0.54 | 66 |
| Dickeya dianthicola 67-19 | 0.66 | HGI48_RS18570 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.97 | HGI48_RS15730 | | nitrogen regulatory protein P-II | low | > 71 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF820 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.94 | GFF2454 | | Nitrogen regulatory protein P-II | low | > 78 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS02510 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.94 | BWI76_RS21245 | | nitrogen regulatory protein P-II | low | > 92 |
| Dickeya dianthicola ME23 | 0.64 | DZA65_RS19705 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.97 | DZA65_RS16810 | | nitrogen regulatory protein P-II | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS02030 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.95 | LU632_RS17925 | glnB | nitrogen regulatory protein P-II | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS02560 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.98 | HER17_RS05930 | | nitrogen regulatory protein P-II | low | > 75 |
| Dickeya dadantii 3937 | 0.62 | DDA3937_RS18635 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.97 | DDA3937_RS15635 | | nitrogen regulatory protein P-II | low | > 74 |
| Pantoea sp. MT58 | 0.60 | IAI47_02565 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.97 | IAI47_04950 | | nitrogen regulatory protein P-II | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_14940 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.89 | CSW01_11410 | | nitrogen regulatory protein P-II | low | > 62 |
| Shewanella oneidensis MR-1 | 0.39 | SO0598 | yjeF | yjeF protein (NCBI ptt file) | 0.85 | SO3519 | glnB-2 | nitrogen regulatory protein P-II 1 (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_0592 | | carbohydrate kinase, YjeF related protein (RefSeq) | 0.85 | Shewana3_3124 | | nitrogen regulatory protein P-II (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.38 | MIT1002_03793 | | Nicotinamide nucleotide repair protein | 0.81 | MIT1002_02726 | | Nitrogen regulatory protein P-II | low | > 70 |
| Shewanella amazonensis SB2B | 0.37 | Sama_3030 | | YjeF protein (RefSeq) | 0.84 | Sama_0935 | | nitrogen regulatory protein P-II (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.36 | Shew_0561 | | carbohydrate kinase, YjeF-related protein (RefSeq) | 0.83 | Shew_1110 | | nitrogen regulatory protein P-II (RefSeq) | low | > 60 |
| Lysobacter sp. OAE881 | 0.35 | ABIE51_RS08050 | | NAD(P)H-hydrate dehydratase | 0.76 | ABIE51_RS00145 | | P-II family nitrogen regulator | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.33 | Xcc-8004.2253.1 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.74 | Xcc-8004.4913.1 | | Nitrogen regulatory protein P-II | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.30 | B158DRAFT_1947 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.83 | B158DRAFT_2530 | | nitrogen regulatory protein P-II family | low | > 40 |
| Burkholderia phytofirmans PsJN | 0.25 | BPHYT_RS09505 | | carbohydrate kinase | 0.80 | BPHYT_RS05485 | | nitrogen regulatory protein P-II 1 | low | > 109 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.23 | CA264_16280 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.27 | CA264_21345 | | transcriptional regulator | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.23 | QEN71_RS21930 | | NAD(P)H-hydrate dehydratase | 0.79 | QEN71_RS24890 | | P-II family nitrogen regulator | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.23 | H281DRAFT_00907 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.80 | H281DRAFT_00219 | | nitrogen regulatory protein P-II family | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.23 | HSERO_RS11180 | | sugar kinase | 0.70 | HSERO_RS00420 | | nitrogen regulatory protein P-II 1 | — | — |
| Ralstonia sp. UNC404CL21Col | 0.23 | ABZR87_RS12740 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.78 | ABZR87_RS16080 | | P-II family nitrogen regulator | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.23 | RALBFv3_RS01295 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.77 | RALBFv3_RS04180 | | nitrogen regulatory protein P-II 1 | low | > 76 |
| Ralstonia solanacearum UW163 | 0.23 | UW163_RS14605 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.77 | UW163_RS09490 | | nitrogen regulatory protein P-II 1 | — | — |
| Paraburkholderia graminis OAS925 | 0.23 | ABIE53_002139 | | hydroxyethylthiazole kinase-like uncharacterized protein yjeF | 0.80 | ABIE53_001346 | | nitrogen regulatory protein P-II 1 | low | > 113 |
| Ralstonia solanacearum PSI07 | 0.23 | RPSI07_RS16180 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.78 | RPSI07_RS13170 | | nitrogen regulatory protein P-II 1 | — | — |
| Ralstonia solanacearum GMI1000 | 0.22 | RS_RS08700 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.78 | RS_RS11770 | | nitrogen regulatory protein P-II 1 | low | > 80 |
| Bosea sp. OAE506 | 0.22 | ABIE41_RS16885 | | NAD(P)H-hydrate dehydratase | 0.75 | ABIE41_RS16890 | | P-II family nitrogen regulator | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.22 | BT4383 | | putative sugar kinase (NCBI ptt file) | 0.37 | BT0545 | | nitrogen regulatory protein P-II (NCBI ptt file) | low | > 81 |
| Bacteroides stercoris CC31F | 0.22 | HMPREF1181_RS06260 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.38 | HMPREF1181_RS16020 | | P-II family nitrogen regulator | low | > 56 |
| Bacteroides ovatus ATCC 8483 | 0.21 | BACOVA_05215 | | YjeF domain protein | 0.38 | BACOVA_03765 | | nitrogen regulatory protein P-II | low | > 94 |
| Castellaniella sp019104865 MT123 | 0.21 | ABCV34_RS02980 | | NAD(P)H-hydrate dehydratase | 0.73 | ABCV34_RS03065 | | P-II family nitrogen regulator | low | > 48 |
| Rhizobium sp. OAE497 | 0.21 | ABIE40_RS09345 | | NAD(P)H-hydrate dehydratase | 0.73 | ABIE40_RS09340 | | P-II family nitrogen regulator | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.20 | RR42_RS09070 | | carbohydrate kinase | 0.80 | RR42_RS04300 | | nitrogen regulatory protein P-II 1 | low | > 128 |
| Phocaeicola dorei CL03T12C01 | 0.20 | ABI39_RS08310 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.39 | ABI39_RS14280 | | P-II family nitrogen regulator | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.20 | HMPREF1058_RS00705 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.37 | HMPREF1058_RS06900 | | P-II family nitrogen regulator | low | > 67 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.19 | Echvi_0073 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.42 | Echvi_1453 | | Nitrogen regulatory protein PII | low | > 79 |
| Dechlorosoma suillum PS | 0.18 | Dsui_2898 | | yjeF-like protein, hydroxyethylthiazole kinase-related protein | 0.79 | Dsui_1687 | | nitrogen regulatory protein PII | — | — |
| Variovorax sp. SCN45 | 0.18 | GFF397 | | NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) | 0.80 | GFF1151 | | Nitrogen regulatory protein P-II | low | > 127 |
| Azospirillum sp. SherDot2 | 0.18 | MPMX19_01552 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.75 | MPMX19_01554 | | Nitrogen regulatory protein P-II | — | — |
| Variovorax sp. OAS795 | 0.17 | ABID97_RS17190 | | NAD(P)H-hydrate dehydratase | 0.80 | ABID97_RS14850 | | P-II family nitrogen regulator | low | > 91 |
| Azospirillum brasilense Sp245 | 0.17 | AZOBR_RS07115 | | hypothetical protein | 0.75 | AZOBR_RS07100 | | nitrogen regulatory protein P-II 1 | — | — |
| Agrobacterium fabrum C58 | 0.17 | Atu1768 | | hypothetical protein | 0.74 | Atu1769 | | nitrogen regulatory protein PII | — | — |
| Sinorhizobium meliloti 1021 | 0.15 | SMc00946 | | hypothetical protein | 0.75 | SMc00947 | | nitrogen regulatory protein PII | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.15 | GFF4918 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.79 | GFF4272 | | Nitrogen regulatory protein P-II | low | > 90 |
| Caulobacter crescentus NA1000 Δfur | 0.15 | CCNA_02043 | | sugar kinase | 0.71 | CCNA_02046 | | nitrogen regulatory protein P-II | — | — |
| Caulobacter crescentus NA1000 | 0.15 | CCNA_02043 | | sugar kinase | 0.71 | CCNA_02046 | | nitrogen regulatory protein P-II | — | — |
| Magnetospirillum magneticum AMB-1 | 0.14 | AMB_RS14075 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.75 | AMB_RS03570 | | P-II family nitrogen regulator | — | — |
| Dinoroseobacter shibae DFL-12 | 0.14 | Dshi_1837 | | carbohydrate kinase, YjeF related protein (RefSeq) | 0.69 | Dshi_0143 | | nitrogen regulatory protein P-II (RefSeq) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.14 | TX73_015380 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.75 | TX73_015385 | | P-II family nitrogen regulator | — | — |
| Methanococcus maripaludis JJ | 0.13 | MMJJ_RS04000 | | NAD(P)H-hydrate dehydratase | 0.50 | MMJJ_RS05105 | | P-II family nitrogen regulator | low | > 28 |
| Mycobacterium tuberculosis H37Rv | 0.13 | Rv3433c | | Conserved protein | 0.67 | Rv2919c | | Probable nitrogen regulatory protein P-II GlnB | low | > 58 |
| Methanococcus maripaludis S2 | 0.13 | MMP_RS01375 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.50 | MMP_RS00380 | | P-II family nitrogen regulator | low | > 25 |
| Sphingomonas koreensis DSMZ 15582 | 0.12 | Ga0059261_0649 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.74 | Ga0059261_3385 | | nitrogen regulatory protein P-II family | — | — |
| Synechococcus elongatus PCC 7942 | 0.12 | Synpcc7942_1273 | | hypothetical protein | 0.64 | Synpcc7942_0321 | glnB | nitrogen regulatory protein P-II | — | — |
| Rhodospirillum rubrum S1H | 0.11 | Rru_A1547 | | hypothetical protein (NCBI) | 0.76 | Rru_A1130 | | Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) | low | > 58 |
Not shown: 22 genomes with orthologs for IAI46_01600 only; 3 genomes with orthologs for IAI46_19450 only