Conservation of cofitness between HSERO_RS01565 and HSERO_RS20320 in Herbaspirillum seropedicae SmR1

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01565 hemolysin secretion protein D 1.0 HSERO_RS20320 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.27 12
Dechlorosoma suillum PS 0.59 Dsui_2025 RND family efflux transporter, MFP subunit 0.70 Dsui_1417 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Paraburkholderia graminis OAS925 0.58 ABIE53_004107 multidrug efflux system membrane fusion protein 0.73 ABIE53_003696 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS22510 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.74 BPHYT_RS17685 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 109
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_03189 membrane fusion protein, multidrug efflux system 0.74 H281DRAFT_05658 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS19405 efflux RND transporter periplasmic adaptor subunit 0.72 ABZR87_RS02475 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS20100 efflux RND transporter periplasmic adaptor subunit 0.73 QEN71_RS27840 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 153
Ralstonia solanacearum PSI07 0.54 RPSI07_RS05170 efflux RND transporter periplasmic adaptor subunit 0.73 RPSI07_RS10415 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
Azospirillum sp. SherDot2 0.52 MPMX19_02967 Efflux pump periplasmic linker BepF 0.49 MPMX19_02543 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 112
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS27680 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.71 RR42_RS18890 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Variovorax sp. SCN45 0.46 GFF430 RND efflux system, membrane fusion protein 0.74 GFF5351 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)
Variovorax sp. OAS795 0.45 ABID97_RS17355 efflux RND transporter periplasmic adaptor subunit 0.73 ABID97_RS23130 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
Acidovorax sp. GW101-3H11 0.44 Ac3H11_259 Probable Co/Zn/Cd efflux system membrane fusion protein 0.71 Ac3H11_4732 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_2967 Secretion protein HlyD 0.55 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.38 23
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_2967 Secretion protein HlyD 0.55 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 86
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_947 Multidrug efflux membrane fusion protein MexE 0.54 Pf6N2E2_3839 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 103
Pseudomonas sp. RS175 0.43 PFR28_02012 Multidrug resistance protein MdtA 0.52 PFR28_04932 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 88
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_3061 Multidrug efflux membrane fusion protein MexE 0.54 PfGW456L13_359 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 87
Rhodopseudomonas palustris CGA009 0.42 TX73_015640 efflux RND transporter periplasmic adaptor subunit 0.47 TX73_001620 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_4865 Multidrug efflux membrane fusion protein MexE 0.55 Pf1N1B4_1624 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 87
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_23965 RND transporter MFP subunit 0.55 AO353_12085 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 101
Pseudomonas putida KT2440 0.41 PP_3425 Efflux transporter RND family, MFP subunit 0.55 PP_0292 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 96
Rhizobium sp. OAE497 0.41 ABIE40_RS14880 efflux RND transporter periplasmic adaptor subunit 0.48 ABIE40_RS19445 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 0.85 9
Agrobacterium fabrum C58 0.40 Atu2482 HlyD family secretion protein 0.46 Atu0040 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase low > 89
Pseudomonas stutzeri RCH2 0.40 Psest_2145 RND family efflux transporter, MFP subunit 0.56 Psest_0155 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 67
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.55 PFLU_RS01620 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.55 PFLU_RS01620 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 109
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_27600 RND transporter MFP subunit 0.54 AO356_09800 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 104
Pseudomonas simiae WCS417 0.39 PS417_13195 RND transporter MFP subunit 0.55 PS417_01575 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 88
Pseudomonas sp. S08-1 0.38 OH686_01010 Multidrug efflux system, membrane fusion component 0.56 OH686_14590 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 80
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS15405 efflux RND transporter periplasmic adaptor subunit 0.25 ABZR86_RS06710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 74
Sinorhizobium meliloti 1021 0.37 SMc01094 multidrug efflux system transmembrane protein 0.47 SMc02570 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 103
Pantoea sp. MT58 0.37 IAI47_10305 efflux RND transporter periplasmic adaptor subunit 0.23 IAI47_07070 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 76
Shewanella sp. ANA-3 0.37 Shewana3_1077 RND family efflux transporter MFP subunit (RefSeq) 0.20 Shewana3_1849 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) low > 73
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1473 RND family efflux transporter, MFP subunit 0.22 EX28DRAFT_0535 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) low > 76
Serratia liquefaciens MT49 0.36 IAI46_09930 efflux RND transporter periplasmic adaptor subunit 0.23 IAI46_08190 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 86
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS08135 efflux RND transporter periplasmic adaptor subunit 0.25 LRK54_RS01585 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 59
Klebsiella michiganensis M5al 0.36 BWI76_RS12950 acriflavin resistance protein AcrA 0.23 BWI76_RS18945 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase
Rhodospirillum rubrum S1H 0.36 Rru_A0887 Secretion protein HlyD (NCBI) 0.44 Rru_A3595 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (NCBI)
Enterobacter sp. TBS_079 0.36 MPMX20_01154 Multidrug resistance protein MdtE 0.23 MPMX20_03006 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 85
Rahnella sp. WP5 0.36 EX31_RS01490 efflux RND transporter periplasmic adaptor subunit 0.24 EX31_RS11460 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 89
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.3478.1 RND efflux system, membrane fusion protein CmeA 0.18 Xcc-8004.2944.1 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) low > 74
Rhodanobacter denitrificans MT42 0.35 LRK55_RS07885 efflux RND transporter periplasmic adaptor subunit 0.25 LRK55_RS01365 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 63
Magnetospirillum magneticum AMB-1 0.35 AMB_RS09485 efflux RND transporter periplasmic adaptor subunit 0.44 AMB_RS22930 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase
Alteromonas macleodii MIT1002 0.34 MIT1002_02999 Efflux pump periplasmic linker BepF 0.24 MIT1002_02637 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase low > 70
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_14950 Efflux RND transporter periplasmic adaptor subunit 0.25 OKGIIK_04970 hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase low > 52
Lysobacter sp. OAE881 0.34 ABIE51_RS01055 efflux RND transporter periplasmic adaptor subunit 0.23 ABIE51_RS13305 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU3247 efflux transporter, RND family, MFP subunit (TIGR) 0.41 DVU1038 hisA phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (TIGR) low > 55
Azospirillum brasilense Sp245 0.31 AZOBR_RS16480 hemolysin secretion protein D 0.49 AZOBR_RS01680 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS09930 efflux RND transporter periplasmic adaptor subunit 0.24 A4249_RS10710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 48
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0035 efflux transporter, RND family, MFP subunit (RefSeq) 0.41 DvMF_3120 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) low > 51
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_1851 RND family efflux transporter, MFP subunit 0.41 Ga0059261_1047 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 68
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4247 RND efflux system, membrane fusion protein CmeA 0.22 GFF3908 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) low > 78
Bosea sp. OAE506 0.28 ABIE41_RS17115 efflux RND transporter periplasmic adaptor subunit 0.48 ABIE41_RS03950 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS02445 efflux RND transporter periplasmic adaptor subunit 0.26 HMPREF1058_RS06170 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 67
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS01695 efflux RND transporter periplasmic adaptor subunit 0.25 ABI39_RS19925 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 72
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS07685 efflux RND transporter periplasmic adaptor subunit 0.28 HMPREF1078_RS13570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase low > 61
Bacteroides thetaiotaomicron VPI-5482 0.21 BT0885 putative cation efflux pump (NCBI ptt file) 0.23 BT1379 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) low > 81

Not shown: 0 genomes with orthologs for HSERO_RS01565 only; 44 genomes with orthologs for HSERO_RS20320 only