Conservation of cofitness between HSERO_RS21535 and HSERO_RS17110 in Herbaspirillum seropedicae SmR1

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21535 NADH dehydrogenase 1.0 HSERO_RS17110 ribonuclease H 0.46 5
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS26840 NADH dehydrogenase 0.80 BPHYT_RS14220 ribonuclease H — —
Paraburkholderia graminis OAS925 0.74 ABIE53_005905 alkyl hydroperoxide reductase subunit F 0.79 ABIE53_003009 ribonuclease HI — —
Paraburkholderia bryophila 376MFSha3.1 0.74 H281DRAFT_02889 alkyl hydroperoxide reductase subunit F 0.79 H281DRAFT_04397 RNase HI — —
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS13375 alkyl hydroperoxide reductase subunit F 0.79 QEN71_RS04750 ribonuclease HI — —
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS17240 alkyl hydroperoxide reductase subunit F 0.74 ABZR87_RS14175 ribonuclease HI — —
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_22810 alkyl hydroperoxide reductase subunit F 0.72 AO356_24490 ribonuclease H — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_448 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.72 Pf6N2E2_589 Ribonuclease HI (EC 3.1.26.4) — —
Pseudomonas sp. RS175 0.71 PFR28_02481 Alkyl hydroperoxide reductase subunit F 0.72 PFR28_01554 Ribonuclease HI — —
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_2928 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.72 PfGW456L13_3338 Ribonuclease HI (EC 3.1.26.4) — —
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_26960 alkyl hydroperoxide reductase subunit F 0.71 AO353_23500 ribonuclease H — —
Pseudomonas simiae WCS417 0.71 PS417_14040 alkyl hydroperoxide reductase 0.72 PS417_12230 ribonuclease H — —
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_5010 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.71 Pf1N1B4_4598 Ribonuclease HI (EC 3.1.26.4) — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS22265 alkyl hydroperoxide reductase subunit F 0.74 RALBFv3_RS02225 ribonuclease HI — —
Ralstonia solanacearum UW163 0.71 UW163_RS22810 alkyl hydroperoxide reductase subunit F 0.74 UW163_RS15535 ribonuclease HI — —
Pseudomonas stutzeri RCH2 0.71 Psest_1134 alkyl hydroperoxide reductase, F subunit 0.69 Psest_2073 Ribonuclease HI — —
Ralstonia solanacearum GMI1000 0.71 RS_RS18340 alkyl hydroperoxide reductase subunit F 0.74 RS_RS07595 ribonuclease H — —
Rhodanobacter denitrificans MT42 0.71 LRK55_RS00485 alkyl hydroperoxide reductase subunit F 0.62 LRK55_RS16500 ribonuclease HI — —
Azospirillum sp. SherDot2 0.71 MPMX19_05836 Alkyl hydroperoxide reductase subunit F 0.68 MPMX19_01081 Ribonuclease HI — —
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS00710 alkyl hydroperoxide reductase subunit F 0.62 LRK54_RS16775 ribonuclease HI — —
Ralstonia solanacearum PSI07 0.70 RPSI07_RS00935 alkyl hydroperoxide reductase subunit F 0.74 RPSI07_RS15220 ribonuclease HI — —
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_06550 ahpF alkyl hydroperoxide reductase subunit F 0.62 OKGIIK_07990 rnhA ribonuclease HI — —
Pseudomonas putida KT2440 0.70 PP_2440 Alkyl hydroperoxide reductase subunit F 0.72 PP_4142 ribonuclease H — —
Castellaniella sp019104865 MT123 0.70 ABCV34_RS09915 alkyl hydroperoxide reductase subunit F 0.68 ABCV34_RS10475 ribonuclease HI — —
Azospirillum brasilense Sp245 0.69 AZOBR_RS20515 alkyl hydroperoxide reductase subunit F 0.69 AZOBR_RS10505 ribonuclease H low > 97
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.72 Psyr_1763 RNase HI — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.72 Psyr_1763 RNase HI — —
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS08495 alkyl hydroperoxide reductase subunit F 0.64 ABZR86_RS07275 ribonuclease HI — —
Pseudomonas fluorescens SBW25 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.71 PFLU_RS12920 ribonuclease HI — —
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.71 PFLU_RS12920 ribonuclease HI — —
Lysobacter sp. OAE881 0.69 ABIE51_RS05480 alkyl hydroperoxide reductase subunit F 0.61 ABIE51_RS14100 ribonuclease HI — —
Rhodospirillum rubrum S1H 0.68 Rru_A1417 thioredoxin-disulfide reductase (NCBI) 0.66 Rru_A3054 Ribonuclease H (NCBI) low > 58
Pseudomonas sp. S08-1 0.68 OH686_18675 alkyl hydroperoxide reductase subunit F 0.74 OH686_03570 Ribonuclease HI — —
Variovorax sp. SCN45 0.67 GFF2825 Alkyl hydroperoxide reductase protein F 0.69 GFF1119 Ribonuclease HI (EC 3.1.26.4) low > 127
Dechlorosoma suillum PS 0.67 Dsui_1902 alkyl hydroperoxide reductase, F subunit 0.69 Dsui_2482 ribonuclease HI — —
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.4222.1 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.63 Xcc-8004.4033.1 Ribonuclease HI (EC 3.1.26.4) — —
Acidovorax sp. GW101-3H11 0.66 Ac3H11_232 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.72 Ac3H11_480 Ribonuclease HI (EC 3.1.26.4) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.65 A4249_RS04545 alkyl hydroperoxide reductase subunit F 0.71 A4249_RS05650 ribonuclease HI — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3915 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.66 GFF4259 Ribonuclease HI (EC 3.1.26.4) — —
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.72 CCNA_03476 ribonuclease HI low > 67
Caulobacter crescentus NA1000 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.72 CCNA_03476 ribonuclease HI 0.60 41
Marinobacter adhaerens HP15 0.64 HP15_3619 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.66 HP15_1803 ribonuclease Hi chain A-like protein — —
Sphingomonas koreensis DSMZ 15582 0.63 Ga0059261_0156 alkyl hydroperoxide reductase subunit F 0.65 Ga0059261_3252 Ribonuclease HI — —
Shewanella oneidensis MR-1 0.62 SO0956 ahpF alkyl hydroperoxide reductase, F subunit (NCBI ptt file) 0.59 SO2560 rnhA ribonuclease HI (NCBI ptt file) — —
Shewanella sp. ANA-3 0.62 Shewana3_3326 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.59 Shewana3_2366 rnhA ribonuclease H (RefSeq) low > 73
Klebsiella michiganensis M5al 0.62 BWI76_RS07945 alkyl hydroperoxide reductase subunit F 0.62 BWI76_RS05450 ribonuclease HI low > 92
Shewanella amazonensis SB2B 0.61 Sama_0618 alkyl hydroperoxide reductase, F subunit (RefSeq) 0.62 Sama_1881 rnhA ribonuclease H (RefSeq) low > 62
Shewanella loihica PV-4 0.60 Shew_0793 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.61 Shew_2112 ribonuclease H (RefSeq) low > 60
Enterobacter asburiae PDN3 0.60 EX28DRAFT_2349 alkyl hydroperoxide reductase subunit F 0.60 EX28DRAFT_2680 Ribonuclease HI — —
Escherichia coli ECRC62 0.60 BNILDI_21890 Alkyl hydroperoxide reductase subunit F 0.63 BNILDI_09355 rnhA ribonuclease HI low > 75
Escherichia coli ECRC100 0.60 OKFHMN_07505 Alkyl hydroperoxide reductase subunit F 0.63 OKFHMN_09970 rnhA ribonuclease HI low > 80
Escherichia coli ECRC99 0.60 KEDOAH_20465 Alkyl hydroperoxide reductase subunit F 0.63 KEDOAH_18185 rnhA ribonuclease HI — —
Escherichia coli ECRC102 0.60 NIAGMN_05560 Alkyl hydroperoxide reductase subunit F 0.63 NIAGMN_07820 rnhA ribonuclease HI — —
Escherichia coli ECOR27 0.60 NOLOHH_23880 Alkyl hydroperoxide reductase subunit F 0.63 NOLOHH_02315 rnhA ribonuclease HI low > 75
Escherichia coli ECRC98 0.60 JDDGAC_11150 Alkyl hydroperoxide reductase subunit F 0.63 JDDGAC_13565 rnhA ribonuclease HI low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03099 Alkyl hydroperoxide reductase subunit F 0.63 OHPLBJKB_03447 Ribonuclease HI low > 73
Escherichia coli ECRC101 0.60 MCAODC_26720 Alkyl hydroperoxide reductase subunit F 0.63 MCAODC_00485 rnhA ribonuclease HI low > 87
Escherichia coli ECOR38 0.60 HEPCGN_00775 Alkyl hydroperoxide reductase subunit F 0.63 HEPCGN_07910 rnhA ribonuclease HI low > 87
Escherichia fergusonii Becca 0.60 EFB2_03485 Alkyl hydroperoxide reductase subunit F 0.63 EFB2_03829 Ribonuclease HI low > 86
Pectobacterium carotovorum WPP14 0.60 HER17_RS02550 alkyl hydroperoxide reductase subunit F 0.60 HER17_RS05465 ribonuclease HI — —
Escherichia coli BW25113 0.60 b0606 ahpF alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) 0.63 b0214 rnhA ribonuclease H (NCBI) — —
Escherichia coli BL21 0.60 ECD_00575 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 0.63 ECD_00207 ribonuclease HI — —
Pantoea sp. MT58 0.60 IAI47_06795 alkyl hydroperoxide reductase subunit F 0.61 IAI47_15330 ribonuclease HI — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS03325 alkyl hydroperoxide reductase subunit F 0.63 ECOLIN_RS01170 ribonuclease HI — —
Enterobacter sp. TBS_079 0.60 MPMX20_01272 Alkyl hydroperoxide reductase subunit F 0.59 MPMX20_00899 Ribonuclease HI low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4514 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.61 GFF4046 Ribonuclease HI (EC 3.1.26.4) — —
Alteromonas macleodii MIT1002 0.46 MIT1002_01785 NADH dehydrogenase 0.60 MIT1002_01690 Ribonuclease HI low > 70
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0279 alkyl hydroperoxide reductase, F subunit 0.68 B158DRAFT_1063 Ribonuclease HI — —

Not shown: 10 genomes with orthologs for HSERO_RS21535 only; 20 genomes with orthologs for HSERO_RS17110 only