Conservation of cofitness between HSERO_RS11215 and HSERO_RS07150 in Herbaspirillum seropedicae SmR1

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS11215 methionine sulfoxide reductase B 1.0 HSERO_RS07150 apolipoprotein acyltransferase 0.36 4
Castellaniella sp019104865 MT123 0.70 ABCV34_RS08520 peptide-methionine (R)-S-oxide reductase MsrB 0.62 ABCV34_RS02585 carbon-nitrogen hydrolase family protein low > 48
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS09545 peptide methionine sulfoxide reductase 0.68 BPHYT_RS03545 apolipoprotein acyltransferase low > 109
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS12635 peptide-methionine (R)-S-oxide reductase MsrB 0.61 ABZR87_RS01100 carbon-nitrogen hydrolase family protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_00913 peptide-methionine (R)-S-oxide reductase 0.68 H281DRAFT_04689 nitrilase low > 103
Paraburkholderia graminis OAS925 0.68 ABIE53_002148 peptide-methionine (R)-S-oxide reductase 0.68 ABIE53_000852 putative amidohydrolase low > 113
Ralstonia solanacearum GMI1000 0.68 RS_RS08825 peptide-methionine (R)-S-oxide reductase 0.62 RS_RS13310 carbon-nitrogen hydrolase family protein low > 80
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS01185 peptide-methionine (R)-S-oxide reductase 0.61 RALBFv3_RS05450 carbon-nitrogen hydrolase family protein low > 76
Ralstonia solanacearum UW163 0.67 UW163_RS14495 peptide-methionine (R)-S-oxide reductase 0.61 UW163_RS08175 carbon-nitrogen hydrolase family protein — —
Lysobacter sp. OAE881 0.66 ABIE51_RS05405 peptide-methionine (R)-S-oxide reductase MsrB 0.15 ABIE51_RS09320 carbon-nitrogen hydrolase — —
Ralstonia solanacearum PSI07 0.66 RPSI07_RS16290 peptide-methionine (R)-S-oxide reductase 0.62 RPSI07_RS11855 carbon-nitrogen hydrolase family protein low > 81
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS11165 methionine sulfoxide reductase B 0.64 RR42_RS05880 acyltransferase low > 128
Synechococcus elongatus PCC 7942 0.65 Synpcc7942_2190 msrB Methionine sulfoxide reductase B 0.36 Synpcc7942_2358 nitrilase-like low > 38
Agrobacterium fabrum C58 0.64 Atu0908 transcriptional regulator 0.33 Atu3510 amidohydrolase low > 89
Rhizobium sp. OAE497 0.64 ABIE40_RS04980 peptide-methionine (R)-S-oxide reductase MsrB 0.34 ABIE40_RS17345 carbon-nitrogen hydrolase family protein low > 107
Magnetospirillum magneticum AMB-1 0.64 AMB_RS20830 peptide-methionine (R)-S-oxide reductase 0.35 AMB_RS08115 carbon-nitrogen hydrolase family protein low > 64
Sinorhizobium meliloti 1021 0.62 SMc00117 hypothetical protein 0.34 SMc02442 hydrolase low > 103
Acinetobacter radioresistens SK82 0.60 MPMX26_01870 Peptide methionine sulfoxide reductase MsrB 0.33 MPMX26_00580 Deaminated glutathione amidase low > 36
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_19155 peptide methionine sulfoxide reductase 0.40 AO353_05220 carbon-nitrogen hydrolase low > 101
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS11250 peptide-methionine (R)-S-oxide reductase MsrB 0.13 ABZR86_RS02765 carbon-nitrogen hydrolase — —
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2445 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.41 Pf6N2E2_3281 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) low > 103
Rhodopseudomonas palustris CGA009 0.60 TX73_021075 peptide-methionine (R)-S-oxide reductase MsrB 0.36 TX73_003100 carbon-nitrogen hydrolase family protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_260 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.41 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) low > 87
Acidovorax sp. GW101-3H11 0.60 Ac3H11_2535 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.51 Ac3H11_1207 FIG003879: Predicted amidohydrolase low > 79
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_03085 peptide methionine sulfoxide reductase 0.41 AO356_07100 carbon-nitrogen hydrolase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_3614 Protein of unknown function DUF25 0.42 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_3614 Protein of unknown function DUF25 0.42 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase low > 86
Pseudomonas putida KT2440 0.59 PP_1873 Peptide methionine sulfoxide reductase MsrB 0.39 PP_0939 Carbon-nitrogen hydrolase family protein low > 96
Variovorax sp. OAS795 0.59 ABID97_RS15695 peptide-methionine (R)-S-oxide reductase MsrB 0.49 ABID97_RS02000 carbon-nitrogen hydrolase family protein low > 91
Variovorax sp. SCN45 0.59 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.50 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily low > 127
Pseudomonas sp. RS175 0.58 PFR28_00985 Peptide methionine sulfoxide reductase MsrB 0.41 PFR28_00160 Deaminated glutathione amidase low > 88
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.41 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) low > 87
Pseudomonas stutzeri RCH2 0.58 Psest_1773 methionine-R-sulfoxide reductase 0.40 Psest_3321 Predicted amidohydrolase low > 67
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.40 PFLU_RS04335 carbon-nitrogen hydrolase family protein low > 109
Pseudomonas fluorescens SBW25 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.40 PFLU_RS04335 carbon-nitrogen hydrolase family protein low > 109
Pseudomonas simiae WCS417 0.57 PS417_08565 peptide methionine sulfoxide reductase 0.40 PS417_04280 carbon-nitrogen hydrolase low > 88
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_2180 methionine-R-sulfoxide reductase 0.35 Ga0059261_3603 Predicted amidohydrolase low > 68
Dinoroseobacter shibae DFL-12 0.56 Dshi_1706 methionine-R-sulfoxide reductase (RefSeq) 0.29 Dshi_3506 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) low > 64
Pseudomonas sp. S08-1 0.56 OH686_22580 Peptide-methionine (R)-S-oxide reductase MsrB 0.44 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily 0.59 36
Shewanella sp. ANA-3 0.54 Shewana3_4333 methionine-R-sulfoxide reductase (RefSeq) 0.35 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.54 MIT1002_02396 Peptide methionine sulfoxide reductase MsrB 0.42 MIT1002_00226 (R)-stereoselective amidase low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF4579 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.53 GFF2535 FIG003879: Predicted amidohydrolase low > 90
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01954 Peptide methionine sulfoxide reductase MsrB 0.19 OHPLBJKB_03080 Deaminated glutathione amidase low > 73
Enterobacter sp. TBS_079 0.52 MPMX20_01845 Peptide methionine sulfoxide reductase MsrB 0.18 MPMX20_01285 Deaminated glutathione amidase 0.23 40
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1772 methionine-R-sulfoxide reductase 0.21 EX28DRAFT_2337 Predicted amidohydrolase low > 76
Escherichia coli ECOR38 0.52 HEPCGN_05125 msrB Peptide methionine sulfoxide reductase MsrB 0.19 HEPCGN_00865 tatE deaminated glutathione amidase low > 87
Escherichia coli ECRC98 0.52 JDDGAC_01310 msrB Peptide methionine sulfoxide reductase MsrB 0.19 JDDGAC_11055 tatE deaminated glutathione amidase low > 86
Escherichia coli ECOR27 0.52 NOLOHH_17265 msrB Peptide methionine sulfoxide reductase MsrB 0.19 NOLOHH_23785 tatE deaminated glutathione amidase low > 75
Escherichia fergusonii Becca 0.52 EFB2_02216 Peptide methionine sulfoxide reductase MsrB 0.19 EFB2_03466 Deaminated glutathione amidase low > 86
Escherichia coli BW25113 0.52 b1778 yeaA methionine sulfoxide reductase B (NCBI) 0.12 b0219 yafV predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) low > 76
Escherichia coli BL21 0.52 ECD_01747 methionine sulfoxide reductase B 0.19 ECD_00595 putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) low > 61
Escherichia coli Nissle 1917 0.52 ECOLIN_RS09915 peptide-methionine (R)-S-oxide reductase MsrB 0.19 ECOLIN_RS03410 deaminated glutathione amidase — —
Escherichia coli ECRC100 0.52 OKFHMN_26735 msrB Peptide methionine sulfoxide reductase MsrB 0.19 OKFHMN_07410 tatE deaminated glutathione amidase low > 80
Escherichia coli ECRC62 0.52 BNILDI_16050 msrB Peptide methionine sulfoxide reductase MsrB 0.20 BNILDI_21795 tatE deaminated glutathione amidase low > 75
Escherichia coli ECRC99 0.52 KEDOAH_01375 msrB Peptide methionine sulfoxide reductase MsrB 0.19 KEDOAH_20560 tatE deaminated glutathione amidase — —
Escherichia coli ECRC102 0.52 NIAGMN_01330 msrB Peptide methionine sulfoxide reductase MsrB 0.19 NIAGMN_05465 tatE deaminated glutathione amidase — —
Escherichia coli ECRC101 0.52 MCAODC_18675 msrB Peptide methionine sulfoxide reductase MsrB 0.19 MCAODC_26625 tatE deaminated glutathione amidase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3479 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.16 GFF4538 Aliphatic amidase AmiE (EC 3.5.1.4) low > 78
Marinobacter adhaerens HP15 0.51 HP15_3127 methionine sulfoxide reductase B 0.41 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase low > 73
Bosea sp. OAE506 0.50 ABIE41_RS12740 peptide-methionine (R)-S-oxide reductase MsrB 0.14 ABIE41_RS12325 N-carbamoyl-D-amino-acid hydrolase low > 77
Rahnella sp. WP5 0.50 EX31_RS06285 peptide-methionine (R)-S-oxide reductase MsrB 0.19 EX31_RS23065 deaminated glutathione amidase low > 89
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_09970 peptide-methionine (R)-S-oxide reductase 0.40 CSW01_02215 carbon-nitrogen hydrolase family protein low > 62
Klebsiella michiganensis M5al 0.49 BWI76_RS11515 peptide-methionine (R)-S-oxide reductase 0.21 BWI76_RS07990 carbon-nitrogen hydrolase — —
Serratia liquefaciens MT49 0.49 IAI46_14350 peptide-methionine (R)-S-oxide reductase MsrB 0.37 IAI46_22690 carbon-nitrogen hydrolase family protein low > 86
Erwinia tracheiphila SCR3 0.49 LU632_RS12990 msrB peptide-methionine (R)-S-oxide reductase MsrB 0.24 LU632_RS16420 deaminated glutathione amidase low > 74
Pantoea sp. MT58 0.48 IAI47_08950 peptide-methionine (R)-S-oxide reductase MsrB 0.21 IAI47_14065 deaminated glutathione amidase low > 76
Pectobacterium carotovorum WPP14 0.48 HER17_RS11125 peptide-methionine (R)-S-oxide reductase MsrB 0.18 HER17_RS17575 deaminated glutathione amidase low > 75
Mycobacterium tuberculosis H37Rv 0.48 Rv2674 Probable peptide methionine sulfoxide reductase MsrB (protein-methionine-R-oxide reductase) (peptide met(O) reductase) 0.16 Rv0480c Possible amidohydrolase low > 58
Azospirillum brasilense Sp245 0.46 AZOBR_RS02680 methionine sulfoxide reductase B 0.36 AZOBR_RS02920 amidohydrolase low > 97
Dickeya dianthicola ME23 0.45 DZA65_RS10755 peptide-methionine (R)-S-oxide reductase MsrB 0.18 DZA65_RS06520 deaminated glutathione amidase low > 75
Dickeya dianthicola 67-19 0.45 HGI48_RS10280 peptide-methionine (R)-S-oxide reductase MsrB 0.21 HGI48_RS19475 deaminated glutathione amidase low > 71
Dickeya dadantii 3937 0.44 DDA3937_RS10270 peptide-methionine (R)-S-oxide reductase MsrB 0.18 DDA3937_RS06130 deaminated glutathione amidase low > 74
Azospirillum sp. SherDot2 0.44 MPMX19_06019 Peptide methionine sulfoxide reductase MsrB 0.35 MPMX19_02429 Deaminated glutathione amidase low > 112
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_02265 peptide methionine sulfoxide reductase msrB 0.31 CCNA_00871 carbon-nitrogen hydrolase family protein low > 67
Caulobacter crescentus NA1000 0.41 CCNA_02265 peptide methionine sulfoxide reductase msrB 0.31 CCNA_00871 carbon-nitrogen hydrolase family protein low > 66

Not shown: 1 genomes with orthologs for HSERO_RS11215 only; 18 genomes with orthologs for HSERO_RS07150 only