Conservation of cofitness between HSERO_RS07610 and HSERO_RS06245 in Herbaspirillum seropedicae SmR1

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07610 fumarate hydratase 1.0 HSERO_RS06245 catalase-peroxidase 0.37 16
Ralstonia solanacearum PSI07 0.73 RPSI07_RS05900 class II fumarate hydratase 0.72 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS18630 class II fumarate hydratase 0.65 ABZR87_RS01240 catalase/peroxidase HPI low > 80
Ralstonia solanacearum UW163 0.73 UW163_RS21470 class II fumarate hydratase 0.73 UW163_RS00460 catalase/peroxidase HPI
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS17680 class II fumarate hydratase 0.73 RALBFv3_RS13105 catalase/peroxidase HPI
Enterobacter sp. TBS_079 0.72 MPMX20_02022 Fumarate hydratase class II 0.61 MPMX20_04528 Catalase-peroxidase low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_1608 fumarase, class II (EC 4.2.1.2) 0.61 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Klebsiella michiganensis M5al 0.72 BWI76_RS16270 fumarate hydratase, class II 0.60 BWI76_RS13925 catalase/peroxidase HPI low > 92
Variovorax sp. SCN45 0.72 GFF479 Fumarate hydratase class II (EC 4.2.1.2) 0.73 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Dickeya dianthicola ME23 0.71 DZA65_RS11125 class II fumarate hydratase 0.70 DZA65_RS08685 catalase/peroxidase HPI low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS10655 class II fumarate hydratase 0.70 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Rahnella sp. WP5 0.71 EX31_RS06965 class II fumarate hydratase 0.59 EX31_RS11140 catalase/peroxidase HPI low > 89
Dickeya dianthicola 67-19 0.71 HGI48_RS10655 class II fumarate hydratase 0.70 HGI48_RS08090 catalase/peroxidase HPI low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_02115 Fumarate hydratase class II 0.60 OHPLBJKB_04108 Catalase-peroxidase low > 73
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_04314 fumarase, class II 0.70 H281DRAFT_00053 catalase-peroxidase low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF1806 Fumarate hydratase class II (EC 4.2.1.2) 0.61 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Pectobacterium carotovorum WPP14 0.71 HER17_RS10755 class II fumarate hydratase 0.56 HER17_RS09165 catalase/peroxidase HPI low > 75
Acidovorax sp. GW101-3H11 0.71 Ac3H11_943 Fumarate hydratase class II (EC 4.2.1.2) 0.69 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 79
Serratia liquefaciens MT49 0.71 IAI46_11655 class II fumarate hydratase 0.67 IAI46_17030 catalase/peroxidase HPI low > 86
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS14615 fumarate hydratase 0.75 BPHYT_RS10310 catalase-peroxidase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.70 GFF4101 Fumarate hydratase class II (EC 4.2.1.2) 0.63 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 90
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS04360 class II fumarate hydratase 0.75 QEN71_RS29740 catalase/peroxidase HPI low > 153
Pantoea sp. MT58 0.70 IAI47_10335 class II fumarate hydratase 0.58 IAI47_07215 catalase/peroxidase HPI low > 76
Escherichia coli ECRC100 0.70 OKFHMN_27650 fumC class II fumarate hydratase 0.60 OKFHMN_13660 katG catalase/peroxidase HPI low > 80
Escherichia fergusonii Becca 0.70 EFB2_02381 Fumarate hydratase class II 0.60 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli ECRC99 0.70 KEDOAH_00455 fumC class II fumarate hydratase 0.60 KEDOAH_14500 katG catalase/peroxidase HPI
Escherichia coli ECRC62 0.70 BNILDI_16945 fumC class II fumarate hydratase 0.60 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC101 0.70 MCAODC_17760 fumC class II fumarate hydratase 0.60 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC98 0.70 JDDGAC_02240 fumC class II fumarate hydratase 0.60 JDDGAC_17285 katG catalase/peroxidase HPI low > 86
Escherichia coli ECRC102 0.70 NIAGMN_00425 fumC class II fumarate hydratase 0.60 NIAGMN_11415 katG catalase/peroxidase HPI
Escherichia coli Nissle 1917 0.70 ECOLIN_RS08995 class II fumarate hydratase 0.60 ECOLIN_RS22765 catalase/peroxidase HPI
Escherichia coli ECOR27 0.70 NOLOHH_18155 fumC class II fumarate hydratase 0.60 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Escherichia coli BW25113 0.70 b1611 fumC fumarate hydratase (NCBI) 0.60 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Dechlorosoma suillum PS 0.70 Dsui_0926 fumarate hydratase, class II 0.56 Dsui_2233 catalase/peroxidase HPI 0.58 5
Escherichia coli ECOR38 0.70 HEPCGN_06025 fumC class II fumarate hydratase 0.60 HEPCGN_12305 katG catalase/peroxidase HPI low > 87
Escherichia coli BL21 0.70 ECD_01580 fumarate hydratase (fumarase C),aerobic Class II 0.60 ECD_03828 catalase-peroxidase HPI, heme b-containing
Erwinia tracheiphila SCR3 0.69 LU632_RS12335 fumC class II fumarate hydratase 0.60 LU632_RS19500 katG catalase/peroxidase HPI
Brevundimonas sp. GW460-12-10-14-LB2 0.59 A4249_RS05005 class II fumarate hydratase 0.72 A4249_RS12750 catalase/peroxidase HPI
Echinicola vietnamensis KMM 6221, DSM 17526 0.59 Echvi_1329 fumarate hydratase, class II 0.66 Echvi_1165 catalase/peroxidase HPI
Rhodopseudomonas palustris CGA009 0.59 TX73_018130 class II fumarate hydratase 0.65 TX73_002230 catalase/peroxidase HPI low > 86
Azospirillum sp. SherDot2 0.59 MPMX19_01424 Fumarate hydratase class II 0.64 MPMX19_03084 Catalase-peroxidase low > 112
Sinorhizobium meliloti 1021 0.58 SMc00149 fumarate hydratase 0.66 SMa2379 KatB catalase/peroxidase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3661 Fumarate hydratase, class II 0.72 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3661 Fumarate hydratase, class II 0.72 Psyr_4208 heme catalase/peroxidase low > 86
Phaeobacter inhibens DSM 17395 0.57 PGA1_c13520 fumarate hydratase class II 0.53 PGA1_78p00050 peroxidase/catalase HPI
Mucilaginibacter yixingensis YX-36 DSM 26809 0.57 ABZR88_RS20230 class II fumarate hydratase 0.66 ABZR88_RS16460 catalase/peroxidase HPI
Dinoroseobacter shibae DFL-12 0.57 Dshi_2334 fumarate hydratase, class II (RefSeq) 0.49 Dshi_3801 catalase/peroxidase HPI (RefSeq)
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_02150 fumarate hydratase 0.70 AO353_23210 hydroperoxidase low > 101
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_367 Fumarate hydratase class II (EC 4.2.1.2) 0.70 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Rhizobium sp. OAE497 0.56 ABIE40_RS10540 class II fumarate hydratase 0.65 ABIE40_RS15040 catalase/peroxidase HPI low > 107
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_02194 fumarate hydratase 0.63 CCNA_03138 peroxidase/catalase katG
Caulobacter crescentus NA1000 0.56 CCNA_02194 fumarate hydratase 0.63 CCNA_03138 peroxidase/catalase katG
Pedobacter sp. GW460-11-11-14-LB5 0.56 CA265_RS23855 fumarate hydratase, class II 0.67 CA265_RS00900 catalase/peroxidase HPI
Pseudomonas sp. S08-1 0.56 OH686_21015 fumarate hydratase, class II 0.64 OH686_15490 catalase/peroxidase HPI 0.58 16
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2536 Fumarate hydratase class II (EC 4.2.1.2) 0.72 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Agrobacterium fabrum C58 0.56 Atu1616 fumarate hydratase 0.53 Atu4642 catalase
Pseudomonas putida KT2440 0.56 PP_1755 fumarate hydratase (class 2) 0.72 PP_3668 Catalase-peroxidase low > 96
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_03545 fumarate hydratase 0.72 AO356_07735 hydroperoxidase
Pseudomonas stutzeri RCH2 0.55 Psest_2682 fumarate hydratase, class II 0.62 Psest_2741 catalase/peroxidase HPI low > 67
Synechococcus elongatus PCC 7942 0.55 Synpcc7942_1007 fumC fumarate hydratase 0.57 Synpcc7942_1656 katG catalase/peroxidase HPI low > 38
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS33090 fumarate hydratase 0.72 RR42_RS26270 hydroperoxidase low > 128
Bosea sp. OAE506 0.53 ABIE41_RS12805 class II fumarate hydratase 0.54 ABIE41_RS01200 catalase/peroxidase HPI
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_1040 fumarase, class II (EC 4.2.1.2) 0.54 Ga0059261_3628 catalase/peroxidase HPI low > 68
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS05855 class II fumarate hydratase 0.70 ABZR86_RS00615 catalase/peroxidase HPI low > 74
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_07895 class II fumarate hydratase 0.58 CSW01_07835 catalase-peroxidase low > 62
Mycobacterium tuberculosis H37Rv 0.43 Rv1098c Probable fumarase Fum (fumarate hydratase) 0.55 Rv1908c Catalase-peroxidase-peroxynitritase T KatG
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3403.1 Fumarate hydratase class II (EC 4.2.1.2) 0.71 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 74
Lysobacter sp. OAE881 0.41 ABIE51_RS09015 class II fumarate hydratase 0.69 ABIE51_RS07780 catalase/peroxidase HPI low > 62
Shewanella amazonensis SB2B 0.40 Sama_0822 fumarate hydratase (RefSeq) 0.58 Sama_0745 catalase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_1200 fumarase, class II (EC 4.2.1.2) 0.58 B158DRAFT_0261 catalase/peroxidase HPI low > 40
Alteromonas macleodii MIT1002 0.39 MIT1002_03167 Fumarate hydratase class II 0.52 MIT1002_03345 Catalase-peroxidase 2 precursor low > 70
Marinobacter adhaerens HP15 0.38 HP15_3132 fumarate hydratase class II 0.55 HP15_1397 peroxidase/catalase HPI low > 73
Shewanella loihica PV-4 0.38 Shew_0068 fumarate lyase (RefSeq) 0.52 Shew_0709 catalase/peroxidase HPI (RefSeq) low > 60

Not shown: 25 genomes with orthologs for HSERO_RS07610 only; 2 genomes with orthologs for HSERO_RS06245 only