Conservation of cofitness between HSERO_RS11215 and HSERO_RS02130 in Herbaspirillum seropedicae SmR1

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS11215 methionine sulfoxide reductase B 1.0 HSERO_RS02130 thiazole synthase 0.34 7
Castellaniella sp019104865 MT123 0.70 ABCV34_RS08520 peptide-methionine (R)-S-oxide reductase MsrB 0.73 ABCV34_RS14510 thiazole synthase — —
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS12635 peptide-methionine (R)-S-oxide reductase MsrB 0.34 ABZR87_RS04800 thiazole synthase — —
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS09545 peptide methionine sulfoxide reductase 0.35 BPHYT_RS17775 thiazole synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_00913 peptide-methionine (R)-S-oxide reductase 0.34 H281DRAFT_05639 thiazole-phosphate synthase — —
Paraburkholderia graminis OAS925 0.68 ABIE53_002148 peptide-methionine (R)-S-oxide reductase 0.34 ABIE53_003714 thiazole synthase — —
Ralstonia solanacearum GMI1000 0.68 RS_RS08825 peptide-methionine (R)-S-oxide reductase 0.34 RS_RS00535 thiazole synthase — —
Ralstonia solanacearum UW163 0.67 UW163_RS14495 peptide-methionine (R)-S-oxide reductase 0.33 UW163_RS03655 thiazole synthase — —
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS01185 peptide-methionine (R)-S-oxide reductase 0.33 RALBFv3_RS09925 thiazole synthase — —
Lysobacter sp. OAE881 0.66 ABIE51_RS05405 peptide-methionine (R)-S-oxide reductase MsrB 0.65 ABIE51_RS16545 thiazole synthase — —
Ralstonia solanacearum PSI07 0.66 RPSI07_RS16290 peptide-methionine (R)-S-oxide reductase 0.34 RPSI07_RS23435 thiazole synthase — —
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS11165 methionine sulfoxide reductase B 0.32 RR42_RS01305 thiazole synthase — —
Synechococcus elongatus PCC 7942 0.65 Synpcc7942_2190 msrB Methionine sulfoxide reductase B 0.43 Synpcc7942_0576 thiG thiazole synthase — —
Agrobacterium fabrum C58 0.64 Atu0908 transcriptional regulator 0.30 Atu2566 thiamin biosynthesis ThiG low > 89
Sinorhizobium meliloti 1021 0.62 SMc00117 hypothetical protein 0.25 SM_b20617 thiazole synthase — —
Acinetobacter radioresistens SK82 0.60 MPMX26_01870 Peptide methionine sulfoxide reductase MsrB 0.66 MPMX26_01107 Thiazole synthase low > 36
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_19155 peptide methionine sulfoxide reductase 0.66 AO353_08215 thiazole synthase low > 101
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS11250 peptide-methionine (R)-S-oxide reductase MsrB 0.71 ABZR86_RS11645 thiazole synthase — —
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_260 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.66 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG low > 87
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2445 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.67 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG low > 103
Rhodopseudomonas palustris CGA009 0.60 TX73_021075 peptide-methionine (R)-S-oxide reductase MsrB 0.33 TX73_018530 thiazole synthase — —
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_03085 peptide methionine sulfoxide reductase 0.67 AO356_13375 thiazole synthase low > 104
Acidovorax sp. GW101-3H11 0.60 Ac3H11_2535 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.32 Ac3H11_1059 Thiazole biosynthesis protein ThiG — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_3614 Protein of unknown function DUF25 0.65 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_3614 Protein of unknown function DUF25 0.65 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas putida KT2440 0.59 PP_1873 Peptide methionine sulfoxide reductase MsrB 0.65 PP_5104 thiazole synthase 0.14 92
Variovorax sp. OAS795 0.59 ABID97_RS15695 peptide-methionine (R)-S-oxide reductase MsrB 0.35 ABID97_RS15315 thiazole synthase low > 91
Variovorax sp. SCN45 0.59 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.33 GFF1188 Thiazole synthase (EC 2.8.1.10) low > 127
Pseudomonas sp. RS175 0.58 PFR28_00985 Peptide methionine sulfoxide reductase MsrB 0.67 PFR28_04252 Thiazole synthase low > 88
Pseudomonas stutzeri RCH2 0.58 Psest_1773 methionine-R-sulfoxide reductase 0.68 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis low > 67
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.66 PfGW456L13_1000 Thiazole biosynthesis protein ThiG low > 87
Pseudomonas fluorescens SBW25 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.65 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.65 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas simiae WCS417 0.57 PS417_08565 peptide methionine sulfoxide reductase 0.65 PS417_26775 thiazole synthase low > 88
Dinoroseobacter shibae DFL-12 0.56 Dshi_1706 methionine-R-sulfoxide reductase (RefSeq) 0.28 Dshi_0912 thiazole biosynthesis family protein (RefSeq) low > 64
Pseudomonas sp. S08-1 0.56 OH686_22580 Peptide-methionine (R)-S-oxide reductase MsrB 0.67 OH686_14285 Thiazole synthase low > 80
Shewanella sp. ANA-3 0.54 Shewana3_4333 methionine-R-sulfoxide reductase (RefSeq) 0.37 Shewana3_1940 thiG thiazole synthase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.54 MIT1002_02396 Peptide methionine sulfoxide reductase MsrB 0.36 MIT1002_00093 Thiazole synthase low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF4579 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.35 GFF246 Thiazole biosynthesis protein ThiG — —
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1772 methionine-R-sulfoxide reductase 0.38 EX28DRAFT_4532 Uncharacterized enzyme of thiazole biosynthesis low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01954 Peptide methionine sulfoxide reductase MsrB 0.38 OHPLBJKB_04060 Thiazole synthase low > 73
Enterobacter sp. TBS_079 0.52 MPMX20_01845 Peptide methionine sulfoxide reductase MsrB 0.38 MPMX20_00213 Thiazole synthase low > 85
Escherichia fergusonii Becca 0.52 EFB2_02216 Peptide methionine sulfoxide reductase MsrB 0.38 EFB2_04621 Thiazole synthase low > 86
Escherichia coli BL21 0.52 ECD_01747 methionine sulfoxide reductase B 0.38 ECD_03867 thiamine biosynthesis ThiGH complex subunit low > 61
Escherichia coli ECOR38 0.52 HEPCGN_05125 msrB Peptide methionine sulfoxide reductase MsrB 0.39 HEPCGN_12030 thiG thiazole synthase low > 87
Escherichia coli BW25113 0.52 b1778 yeaA methionine sulfoxide reductase B (NCBI) 0.39 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) low > 76
Escherichia coli ECRC101 0.52 MCAODC_18675 msrB Peptide methionine sulfoxide reductase MsrB 0.38 MCAODC_03895 thiG thiazole synthase low > 87
Escherichia coli ECOR27 0.52 NOLOHH_17265 msrB Peptide methionine sulfoxide reductase MsrB 0.38 NOLOHH_05540 thiG thiazole synthase low > 75
Escherichia coli ECRC102 0.52 NIAGMN_01330 msrB Peptide methionine sulfoxide reductase MsrB 0.38 NIAGMN_11145 thiG thiazole synthase — —
Escherichia coli ECRC98 0.52 JDDGAC_01310 msrB Peptide methionine sulfoxide reductase MsrB 0.38 JDDGAC_17020 thiG thiazole synthase low > 86
Escherichia coli ECRC62 0.52 BNILDI_16050 msrB Peptide methionine sulfoxide reductase MsrB 0.38 BNILDI_05985 thiG thiazole synthase low > 75
Escherichia coli Nissle 1917 0.52 ECOLIN_RS09915 peptide-methionine (R)-S-oxide reductase MsrB 0.37 ECOLIN_RS23020 thiazole synthase — —
Escherichia coli ECRC100 0.52 OKFHMN_26735 msrB Peptide methionine sulfoxide reductase MsrB 0.38 OKFHMN_13395 thiG thiazole synthase low > 80
Escherichia coli ECRC99 0.52 KEDOAH_01375 msrB Peptide methionine sulfoxide reductase MsrB 0.38 KEDOAH_14765 thiG thiazole synthase — —
Marinobacter adhaerens HP15 0.51 HP15_3127 methionine sulfoxide reductase B 0.68 HP15_3274 thiazole synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3479 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.37 GFF4202 Thiazole biosynthesis protein ThiG low > 78
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU0576 msrB peptide methionine sulfoxide reductase MsrB (TIGR) 0.31 DVU2094 thiG thiG protein (TIGR) low > 55
Bosea sp. OAE506 0.50 ABIE41_RS12740 peptide-methionine (R)-S-oxide reductase MsrB 0.32 ABIE41_RS20185 thiazole synthase — —
Rahnella sp. WP5 0.50 EX31_RS06285 peptide-methionine (R)-S-oxide reductase MsrB 0.38 EX31_RS16795 thiazole synthase low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS11515 peptide-methionine (R)-S-oxide reductase 0.38 BWI76_RS01535 thiazole synthase low > 92
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_09970 peptide-methionine (R)-S-oxide reductase 0.40 CSW01_00355 thiazole synthase low > 62
Serratia liquefaciens MT49 0.49 IAI46_14350 peptide-methionine (R)-S-oxide reductase MsrB 0.37 IAI46_01300 thiazole synthase low > 86
Erwinia tracheiphila SCR3 0.49 LU632_RS12990 msrB peptide-methionine (R)-S-oxide reductase MsrB 0.35 LU632_RS00950 thiazole synthase low > 74
Pectobacterium carotovorum WPP14 0.48 HER17_RS11125 peptide-methionine (R)-S-oxide reductase MsrB 0.38 HER17_RS20400 thiazole synthase low > 75
Pantoea sp. MT58 0.48 IAI47_08950 peptide-methionine (R)-S-oxide reductase MsrB 0.30 IAI47_20700 thiazole synthase low > 76
Mycobacterium tuberculosis H37Rv 0.48 Rv2674 Probable peptide methionine sulfoxide reductase MsrB (protein-methionine-R-oxide reductase) (peptide met(O) reductase) 0.40 Rv0417 Probable thiamin biosynthesis protein ThiG (thiazole biosynthesis protein) — —
Azospirillum brasilense Sp245 0.46 AZOBR_RS02680 methionine sulfoxide reductase B 0.41 AZOBR_RS30960 thiazole synthase — —
Dickeya dianthicola ME23 0.45 DZA65_RS10755 peptide-methionine (R)-S-oxide reductase MsrB 0.39 DZA65_RS01195 thiazole synthase low > 75
Dickeya dianthicola 67-19 0.45 HGI48_RS10280 peptide-methionine (R)-S-oxide reductase MsrB 0.39 HGI48_RS01150 thiazole synthase low > 71
Dickeya dadantii 3937 0.44 DDA3937_RS10270 peptide-methionine (R)-S-oxide reductase MsrB 0.39 DDA3937_RS01155 thiazole synthase low > 74
Azospirillum sp. SherDot2 0.44 MPMX19_06019 Peptide methionine sulfoxide reductase MsrB 0.46 MPMX19_00262 Thiazole synthase low > 112
Caulobacter crescentus NA1000 0.41 CCNA_02265 peptide methionine sulfoxide reductase msrB 0.60 CCNA_01957 thiazole biosynthesis protein ThiG — —
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_02265 peptide methionine sulfoxide reductase msrB 0.60 CCNA_01957 thiazole biosynthesis protein ThiG — —

Not shown: 3 genomes with orthologs for HSERO_RS11215 only; 22 genomes with orthologs for HSERO_RS02130 only