Conservation of cofitness between HER17_RS02600 and HER17_RS21605 in Pectobacterium carotovorum WPP14

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02600 protease modulator HflC 1.0 HER17_RS21605 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.81 10
Dickeya dianthicola 67-19 0.82 HGI48_RS18530 protease modulator HflC 0.80 HGI48_RS21385 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 71
Dickeya dadantii 3937 0.82 DDA3937_RS18595 protease modulator HflC 0.80 DDA3937_RS21600 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Dickeya dianthicola ME23 0.82 DZA65_RS19665 protease modulator HflC 0.79 DZA65_RS22365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Serratia liquefaciens MT49 0.81 IAI46_01640 protease modulator HflC 0.81 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 86
Erwinia tracheiphila SCR3 0.79 LU632_RS02070 hflC protease modulator HflC 0.72 LU632_RS24810 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Pantoea sp. MT58 0.77 IAI47_02605 protease modulator HflC 0.76 IAI47_00295 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Rahnella sp. WP5 0.77 EX31_RS08805 protease modulator HflC 0.77 EX31_RS06135 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 89
Escherichia fergusonii Becca 0.77 EFB2_04360 Modulator of FtsH protease HflC 0.76 EFB2_04893 Ribosomal RNA small subunit methyltransferase G low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF828 HflC protein 0.75 GFF1717 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 78
Escherichia coli ECRC99 0.77 KEDOAH_15915 hflC protease modulator HflC 0.76 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC100 0.77 OKFHMN_12240 hflC protease modulator HflC 0.76 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Escherichia coli BL21 0.77 ECD_04042 HflB protease modulator specific for phage lambda cII repressor 0.76 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein low > 61
Escherichia coli ECOR38 0.77 HEPCGN_10470 hflC protease modulator HflC 0.76 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 87
Escherichia coli ECRC98 0.77 JDDGAC_15880 hflC protease modulator HflC 0.76 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 86
Escherichia coli BW25113 0.77 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.76 b3740 gidB glucose-inhibited division protein B (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_03867 Modulator of FtsH protease HflC 0.76 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G low > 73
Escherichia coli ECRC102 0.77 NIAGMN_10090 hflC protease modulator HflC 0.76 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli Nissle 1917 0.77 ECOLIN_RS24245 protease modulator HflC 0.76 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC62 0.77 BNILDI_06985 hflC protease modulator HflC 0.76 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Escherichia coli ECRC101 0.77 MCAODC_02755 hflC protease modulator HflC 0.76 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 87
Escherichia coli ECOR27 0.77 NOLOHH_04505 hflC protease modulator HflC 0.76 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Klebsiella michiganensis M5al 0.75 BWI76_RS02550 protease modulator HflC 0.77 BWI76_RS00225 16S rRNA methyltransferase G low > 92
Enterobacter sp. TBS_079 0.74 MPMX20_00456 Modulator of FtsH protease HflC 0.78 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_3372 HflC protein 0.78 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_01850 protease modulator HflC 0.63 CSW01_14050 ribosomal RNA small subunit methyltransferase G low > 62
Alteromonas macleodii MIT1002 0.48 MIT1002_03785 Modulator of FtsH protease HflC 0.57 MIT1002_04123 Ribosomal RNA small subunit methyltransferase G low > 70
Shewanella sp. ANA-3 0.48 Shewana3_0600 HflC protein (RefSeq) 0.59 Shewana3_0001 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 73
Shewanella oneidensis MR-1 0.47 SO0606 hflC hflC protein (NCBI ptt file) 0.58 SO4757 gidB glucose-inhibited division protein B (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.46 Shew_0569 HflC protein (RefSeq) 0.60 Shew_3855 gidB glucose-inhibited division protein B (RefSeq) low > 60
Shewanella amazonensis SB2B 0.45 Sama_3022 hflC protein (RefSeq) 0.57 Sama_3654 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_1955 HflC protein 0.39 B158DRAFT_0378 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) low > 40
Dechlorosoma suillum PS 0.33 Dsui_3134 membrane protease subunit, stomatin/prohibitin 0.37 Dsui_0847 16S rRNA (guanine(527)-N(7))-methyltransferase GidB — —
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_1409 HflC protein 0.47 Pf1N1B4_1935 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_3611 HflC protein 0.46 Pf6N2E2_4204 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.24 41
Marinobacter adhaerens HP15 0.31 HP15_2496 HflC 0.42 HP15_3689 glucose-inhibited division protein B low > 73
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_08640 membrane protease HflC 0.46 AO356_11670 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0575 protease FtsH subunit HflC 0.47 Psyr_5131 16S rRNA m(7)G-527 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0575 protease FtsH subunit HflC 0.47 Psyr_5131 16S rRNA m(7)G-527 methyltransferase low > 86
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS02585 protease modulator HflC 0.45 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas fluorescens SBW25 0.31 PFLU_RS02585 protease modulator HflC 0.45 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_151 HflC protein 0.47 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 87
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_13160 membrane protease HflC 0.47 AO353_10440 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 101
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_06645 hflC protease modulator HflC 0.43 OKGIIK_15445 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 52
Pseudomonas stutzeri RCH2 0.29 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs 0.44 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB — —
Pseudomonas sp. S08-1 0.29 OH686_09455 HflC protein 0.45 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS08350 protease modulator HflC 0.42 ABZR86_RS14875 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Pseudomonas putida KT2440 0.29 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.44 PP_0003 16S RNA methyltransferase low > 96
Pseudomonas simiae WCS417 0.29 PS417_02505 membane protease HflC 0.44 PS417_28515 16S rRNA methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS15315 protease modulator HflC 0.38 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS18060 protease modulator HflC 0.38 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 81
Ralstonia solanacearum UW163 0.29 UW163_RS12780 protease modulator HflC 0.38 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.3954.1 HflC protein 0.38 Xcc-8004.5135.1 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 74
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS13100 membrane protein 0.33 RR42_RS20210 16S rRNA methyltransferase — —
Pseudomonas sp. RS175 0.28 PFR28_05124 Modulator of FtsH protease HflC 0.47 PFR28_04586 Ribosomal RNA small subunit methyltransferase G low > 88
Ralstonia solanacearum GMI1000 0.28 RS_RS06125 protease modulator HflC 0.37 RS_RS16670 ribosomal RNA small subunit methyltransferase G — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS00385 protease modulator HflC 0.42 LRK55_RS08445 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS00615 protease modulator HflC 0.42 LRK54_RS08680 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 59
Lysobacter sp. OAE881 0.28 ABIE51_RS06555 protease modulator HflC 0.38 ABIE51_RS01740 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 62
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS10955 protease modulator HflC 0.37 ABZR87_RS04120 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Rhodospirillum rubrum S1H 0.27 Rru_A2202 HflC (NCBI) 0.13 Rru_A3626 Glucose inhibited division protein (NCBI) — —
Castellaniella sp019104865 MT123 0.27 ABCV34_RS02665 protease modulator HflC 0.33 ABCV34_RS11720 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1802 HflC protein 0.39 Ac3H11_4955 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 79
Desulfovibrio vulgaris Hildenborough JW710 0.25 DVU0683 hflC protein, putative (TIGR) 0.18 DVU1250 gidB methyltransferase GidB (TIGR) low > 55
Variovorax sp. OAS795 0.24 ABID97_RS14265 protease modulator HflC 0.35 ABID97_RS02910 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 91
Paraburkholderia graminis OAS925 0.23 ABIE53_002734 membrane protease subunit HflC 0.39 ABIE53_000263 16S rRNA (guanine527-N7)-methyltransferase low > 113
Variovorax sp. SCN45 0.23 GFF1003 HflC protein 0.36 GFF3337 16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF4855 HflC protein 0.30 GFF2017 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 90
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00524 protease FtsH subunit HflC 0.40 H281DRAFT_02386 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) — —
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS06015 protease modulator HflC 0.40 QEN71_RS29340 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 153
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS12540 membrane protein 0.39 BPHYT_RS19435 16S rRNA methyltransferase — —

Not shown: 14 genomes with orthologs for HER17_RS02600 only; 3 genomes with orthologs for HER17_RS21605 only