Conservation of cofitness between HER17_RS17265 and HER17_RS19450 in Pectobacterium carotovorum WPP14

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS17265 oxygen-dependent coproporphyrinogen oxidase 1.0 HER17_RS19450 leucyl aminopeptidase 0.90 14
Dickeya dadantii 3937 0.81 DDA3937_RS04365 oxygen-dependent coproporphyrinogen oxidase 0.95 DDA3937_RS01995 leucyl aminopeptidase
Rahnella sp. WP5 0.80 EX31_RS20260 oxygen-dependent coproporphyrinogen oxidase 0.92 EX31_RS04385 leucyl aminopeptidase low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS04355 oxygen-dependent coproporphyrinogen oxidase 0.95 HGI48_RS01955 leucyl aminopeptidase low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS04275 oxygen-dependent coproporphyrinogen oxidase 0.95 DZA65_RS02060 leucyl aminopeptidase
Serratia liquefaciens MT49 0.78 IAI46_18545 oxygen-dependent coproporphyrinogen oxidase 0.93 IAI46_02360 leucyl aminopeptidase low > 86
Pantoea sp. MT58 0.76 IAI47_05360 oxygen-dependent coproporphyrinogen oxidase 0.92 IAI47_16795 leucyl aminopeptidase
Erwinia tracheiphila SCR3 0.75 LU632_RS06720 hemF oxygen-dependent coproporphyrinogen oxidase 0.92 LU632_RS20855 pepA leucyl aminopeptidase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2066 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.91 GFF949 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 78
Escherichia coli ECRC62 0.73 BNILDI_12640 hemF oxygen-dependent coproporphyrinogen oxidase 0.90 BNILDI_07455 pepA leucyl aminopeptidase low > 75
Escherichia coli ECOR27 0.73 NOLOHH_13775 hemF oxygen-dependent coproporphyrinogen oxidase 0.90 NOLOHH_04055 pepA leucyl aminopeptidase low > 75
Escherichia coli BL21 0.73 ECD_02336 coproporphyrinogen III oxidase 0.90 ECD_04126 multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor low > 61
Escherichia coli Nissle 1917 0.73 ECOLIN_RS13965 oxygen-dependent coproporphyrinogen oxidase 0.90 ECOLIN_RS24695 leucyl aminopeptidase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01286 Oxygen-dependent coproporphyrinogen-III oxidase 0.90 OHPLBJKB_03776 Cytosol aminopeptidase low > 73
Escherichia coli BW25113 0.73 b2436 hemF coproporphyrinogen III oxidase (NCBI) 0.90 b4260 pepA leucyl aminopeptidase (NCBI) low > 76
Escherichia coli ECOR38 0.73 HEPCGN_21270 hemF oxygen-dependent coproporphyrinogen oxidase 0.90 HEPCGN_09980 pepA leucyl aminopeptidase low > 87
Enterobacter sp. TBS_079 0.72 MPMX20_03323 Oxygen-dependent coproporphyrinogen-III oxidase 0.90 MPMX20_04118 Cytosol aminopeptidase low > 85
Shewanella loihica PV-4 0.72 Shew_3729 coproporphyrinogen III oxidase (RefSeq) 0.77 Shew_0939 leucyl aminopeptidase (RefSeq) low > 60
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0199 coproporphyrinogen oxidase (EC 1.3.3.3) 0.90 EX28DRAFT_3267 Leucyl aminopeptidase low > 76
Escherichia fergusonii Becca 0.72 EFB2_01443 Oxygen-dependent coproporphyrinogen-III oxidase 0.90 EFB2_04275 Cytosol aminopeptidase low > 86
Escherichia coli ECRC102 0.71 NIAGMN_19865 hemF oxygen-dependent coproporphyrinogen oxidase 0.90 NIAGMN_09640 pepA leucyl aminopeptidase
Escherichia coli ECRC98 0.71 JDDGAC_26045 hemF oxygen-dependent coproporphyrinogen oxidase 0.90 JDDGAC_15430 pepA leucyl aminopeptidase low > 86
Escherichia coli ECRC100 0.71 OKFHMN_22095 hemF oxygen-dependent coproporphyrinogen oxidase 0.90 OKFHMN_11790 pepA leucyl aminopeptidase low > 80
Escherichia coli ECRC99 0.71 KEDOAH_06125 hemF oxygen-dependent coproporphyrinogen oxidase 0.90 KEDOAH_16360 pepA leucyl aminopeptidase
Escherichia coli ECRC101 0.71 MCAODC_12625 hemF oxygen-dependent coproporphyrinogen oxidase 0.90 MCAODC_02295 pepA leucyl aminopeptidase low > 87
Shewanella sp. ANA-3 0.71 Shewana3_0041 coproporphyrinogen III oxidase (RefSeq) 0.77 Shewana3_3006 leucyl aminopeptidase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.71 SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) 0.77 SO1368 pepA-2 cytosol aminopeptidase (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.70 BWI76_RS20740 coproporphyrinogen III oxidase 0.90 BWI76_RS03040 leucyl aminopeptidase low > 92
Shewanella amazonensis SB2B 0.69 Sama_0050 coproporphyrinogen III oxidase (RefSeq) 0.78 Sama_0795 leucyl aminopeptidase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.69 MIT1002_00026 Coproporphyrinogen-III oxidase, aerobic 0.77 MIT1002_03197 Cytosol aminopeptidase
Pseudomonas stutzeri RCH2 0.67 Psest_0028 Coproporphyrinogen III oxidase 0.49 Psest_1235 Leucyl aminopeptidase low > 67
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1907 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.52 Pf1N1B4_898 Cytosol aminopeptidase PepA (EC 3.4.11.1)
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_645 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.52 PfGW456L13_4846 Cytosol aminopeptidase PepA (EC 3.4.11.1)
Pseudomonas putida KT2440 0.66 PP_0073 Coproporphyrinogen-III oxidase, aerobic 0.50 PP_0980 Probable cytosol aminopeptidase
Pseudomonas sp. RS175 0.66 PFR28_04656 Oxygen-dependent coproporphyrinogen-III oxidase 0.52 PFR28_03528 Cytosol aminopeptidase
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_10665 coproporphyrinogen III oxidase 0.53 AO353_04535 aminopeptidase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_0024 coproporphyrinogen oxidase 0.53 Psyr_1091 aminopeptidase A, Metallo peptidase, MEROPS family M17
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_0024 coproporphyrinogen oxidase 0.53 Psyr_1091 aminopeptidase A, Metallo peptidase, MEROPS family M17
Pseudomonas sp. S08-1 0.66 OH686_12490 Coproporphyrinogen III oxidase, aerobic 0.51 OH686_07810 Cytosol aminopeptidase PepA
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_11310 coproporphyrinogen III oxidase 0.52 AO356_17470 aminopeptidase
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_4129 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.52 Pf6N2E2_5420 Cytosol aminopeptidase PepA (EC 3.4.11.1)
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00275 coproporphyrinogen III oxidase 0.82 CSW01_12680 cytosol aminopeptidase
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS13525 oxygen-dependent coproporphyrinogen oxidase 0.40 ABZR86_RS19105 leucyl aminopeptidase
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_16050 hemF oxygen-dependent coproporphyrinogen oxidase 0.42 OKGIIK_11560 pepB leucyl aminopeptidase
Pseudomonas fluorescens SBW25 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.52 PFLU_RS05235 leucyl aminopeptidase
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.52 PFLU_RS05235 leucyl aminopeptidase
Rhodanobacter denitrificans MT42 0.65 LRK55_RS09455 oxygen-dependent coproporphyrinogen oxidase 0.43 LRK55_RS12110 leucyl aminopeptidase low > 63
Pseudomonas simiae WCS417 0.64 PS417_00120 coproporphyrinogen III oxidase 0.52 PS417_05165 cytosol aminopeptidase
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS09795 oxygen-dependent coproporphyrinogen oxidase 0.43 LRK54_RS12375 leucyl aminopeptidase
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_0404 coproporphyrinogen oxidase (EC 1.3.3.3) 0.60 B158DRAFT_1167 Leucyl aminopeptidase
Dechlorosoma suillum PS 0.63 Dsui_1597 coproporphyrinogen III oxidase 0.58 Dsui_3536 leucyl aminopeptidase
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS17765 coproporphyrinogen III oxidase 0.45 HSERO_RS15600 cytosol aminopeptidase
Ralstonia solanacearum PSI07 0.62 RPSI07_RS13675 oxygen-dependent coproporphyrinogen oxidase 0.49 RPSI07_RS12825 leucyl aminopeptidase
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS24405 oxygen-dependent coproporphyrinogen oxidase 0.50 QEN71_RS25205 leucyl aminopeptidase
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS06400 oxygen-dependent coproporphyrinogen-III oxidase 0.48 BPHYT_RS04795 cytosol aminopeptidase low > 109
Paraburkholderia graminis OAS925 0.62 ABIE53_001544 coproporphyrinogen III oxidase 0.49 ABIE53_001235 leucyl aminopeptidase low > 113
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03550 coproporphyrinogen III oxidase 0.46 RALBFv3_RS04550 leucyl aminopeptidase
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04520 coproporphyrinogen oxidase 0.49 H281DRAFT_00123 aminopeptidase A. Metallo peptidase. MEROPS family M17
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.5101.1 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.43 Xcc-8004.4446.1 Cytosol aminopeptidase PepA (EC 3.4.11.1)
Ralstonia solanacearum UW163 0.62 UW163_RS10120 coproporphyrinogen III oxidase 0.46 UW163_RS09120 leucyl aminopeptidase
Ralstonia solanacearum GMI1000 0.62 RS_RS11000 coproporphyrinogen III oxidase 0.46 RS_RS12120 cytosol aminopeptidase
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS15415 oxygen-dependent coproporphyrinogen oxidase 0.48 ABZR87_RS00150 leucyl aminopeptidase
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS04725 coproporphyrinogen III oxidase 0.45 RR42_RS16225 cytosol aminopeptidase
Lysobacter sp. OAE881 0.61 ABIE51_RS02020 oxygen-dependent coproporphyrinogen oxidase 0.45 ABIE51_RS04475 leucyl aminopeptidase
Variovorax sp. OAS795 0.59 ABID97_RS16730 oxygen-dependent coproporphyrinogen oxidase 0.37 ABID97_RS16580 leucyl aminopeptidase
Variovorax sp. SCN45 0.59 GFF301 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.35 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1)
Acidovorax sp. GW101-3H11 0.59 Ac3H11_2420 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.35 Ac3H11_2399 Cytosol aminopeptidase PepA (EC 3.4.11.1)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF4526 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.34 GFF4309 Cytosol aminopeptidase PepA (EC 3.4.11.1)
Acinetobacter radioresistens SK82 0.58 MPMX26_02746 Oxygen-dependent coproporphyrinogen-III oxidase 0.38 MPMX26_00157 cytosol aminopeptidase
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02545 oxygen-dependent coproporphyrinogen oxidase 0.41 ABCV34_RS08295 leucyl aminopeptidase
Azospirillum sp. SherDot2 0.34 MPMX19_05010 Oxygen-dependent coproporphyrinogen-III oxidase 0.26 MPMX19_01593 Cytosol aminopeptidase
Caulobacter crescentus NA1000 0.32 CCNA_00540 coproporphyrinogen III oxidase 0.31 CCNA_01763 multifunctional aminopeptidase
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_00540 coproporphyrinogen III oxidase 0.31 CCNA_01763 multifunctional aminopeptidase
Rhodopseudomonas palustris CGA009 0.32 TX73_007780 oxygen-dependent coproporphyrinogen oxidase 0.26 TX73_015830 leucyl aminopeptidase low > 86

Not shown: 11 genomes with orthologs for HER17_RS17265 only; 10 genomes with orthologs for HER17_RS19450 only