Conservation of cofitness between HER17_RS17265 and HER17_RS12010 in Pectobacterium carotovorum WPP14

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS17265 oxygen-dependent coproporphyrinogen oxidase 1.0 HER17_RS12010 aminopeptidase N 0.92 7
Dickeya dadantii 3937 0.81 DDA3937_RS04365 oxygen-dependent coproporphyrinogen oxidase 0.85 DDA3937_RS12885 aminopeptidase N
Rahnella sp. WP5 0.80 EX31_RS20260 oxygen-dependent coproporphyrinogen oxidase 0.80 EX31_RS18125 aminopeptidase N low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS04355 oxygen-dependent coproporphyrinogen oxidase 0.84 HGI48_RS12955 aminopeptidase N low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS04275 oxygen-dependent coproporphyrinogen oxidase 0.84 DZA65_RS13420 aminopeptidase N
Serratia liquefaciens MT49 0.78 IAI46_18545 oxygen-dependent coproporphyrinogen oxidase 0.80 IAI46_08775 aminopeptidase N low > 86
Pantoea sp. MT58 0.76 IAI47_05360 oxygen-dependent coproporphyrinogen oxidase 0.77 IAI47_12745 aminopeptidase N
Erwinia tracheiphila SCR3 0.75 LU632_RS06720 hemF oxygen-dependent coproporphyrinogen oxidase 0.75 LU632_RS09930 pepN aminopeptidase N
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2066 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.77 GFF3235 Membrane alanine aminopeptidase N (EC 3.4.11.2) low > 78
Escherichia coli ECRC62 0.73 BNILDI_12640 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 BNILDI_20175 pepN aminopeptidase N low > 75
Escherichia coli ECOR27 0.73 NOLOHH_13775 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 NOLOHH_21920 pepN aminopeptidase N low > 75
Escherichia coli Nissle 1917 0.73 ECOLIN_RS13965 oxygen-dependent coproporphyrinogen oxidase 0.78 ECOLIN_RS04935 aminopeptidase N low > 55
Escherichia coli BL21 0.73 ECD_02336 coproporphyrinogen III oxidase 0.78 ECD_00936 aminopeptidase N low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01286 Oxygen-dependent coproporphyrinogen-III oxidase 0.78 OHPLBJKB_02734 Aminopeptidase N low > 73
Escherichia coli BW25113 0.73 b2436 hemF coproporphyrinogen III oxidase (NCBI) 0.78 b0932 pepN aminopeptidase N (NCBI) low > 76
Escherichia coli ECOR38 0.73 HEPCGN_21270 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 HEPCGN_23160 pepN aminopeptidase N low > 87
Enterobacter sp. TBS_079 0.72 MPMX20_03323 Oxygen-dependent coproporphyrinogen-III oxidase 0.77 MPMX20_01590 Aminopeptidase N low > 85
Shewanella loihica PV-4 0.72 Shew_3729 coproporphyrinogen III oxidase (RefSeq) 0.56 Shew_1803 aminopeptidase N (RefSeq) low > 60
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0199 coproporphyrinogen oxidase (EC 1.3.3.3) 0.78 EX28DRAFT_2004 aminopeptidase N, Escherichia coli type low > 76
Escherichia fergusonii Becca 0.72 EFB2_01443 Oxygen-dependent coproporphyrinogen-III oxidase 0.78 EFB2_03132 Aminopeptidase N low > 86
Escherichia coli ECRC99 0.71 KEDOAH_06125 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 KEDOAH_22370 pepN aminopeptidase N
Escherichia coli ECRC98 0.71 JDDGAC_26045 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 JDDGAC_08975 pepN aminopeptidase N low > 86
Escherichia coli ECRC101 0.71 MCAODC_12625 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 MCAODC_24755 pepN aminopeptidase N low > 87
Escherichia coli ECRC100 0.71 OKFHMN_22095 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 OKFHMN_05365 pepN aminopeptidase N low > 80
Escherichia coli ECRC102 0.71 NIAGMN_19865 hemF oxygen-dependent coproporphyrinogen oxidase 0.78 NIAGMN_03085 pepN aminopeptidase N
Shewanella sp. ANA-3 0.71 Shewana3_0041 coproporphyrinogen III oxidase (RefSeq) 0.55 Shewana3_1779 pepN aminopeptidase N (RefSeq) low > 73
Shewanella oneidensis MR-1 0.71 SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) 0.55 SO2600 pepN aminopeptidase N (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.70 BWI76_RS20740 coproporphyrinogen III oxidase 0.76 BWI76_RS09890 aminopeptidase N low > 92
Shewanella amazonensis SB2B 0.69 Sama_0050 coproporphyrinogen III oxidase (RefSeq) 0.52 Sama_1586 pepN aminopeptidase N (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.69 MIT1002_00026 Coproporphyrinogen-III oxidase, aerobic 0.45 MIT1002_02028 Aminopeptidase N
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1907 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.47 Pf1N1B4_4614 Membrane alanine aminopeptidase N (EC 3.4.11.2)
Pseudomonas stutzeri RCH2 0.67 Psest_0028 Coproporphyrinogen III oxidase 0.48 Psest_1922 aminopeptidase N, Escherichia coli type low > 67
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_645 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.48 PfGW456L13_3325 Membrane alanine aminopeptidase N (EC 3.4.11.2)
Pseudomonas putida KT2440 0.66 PP_0073 Coproporphyrinogen-III oxidase, aerobic 0.49 PP_2017 aminopeptidase N
Pseudomonas sp. RS175 0.66 PFR28_04656 Oxygen-dependent coproporphyrinogen-III oxidase 0.48 PFR28_01574 Aminopeptidase N
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_10665 coproporphyrinogen III oxidase 0.48 AO353_23630 aminopeptidase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_0024 coproporphyrinogen oxidase 0.48 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_0024 coproporphyrinogen oxidase 0.48 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_11310 coproporphyrinogen III oxidase 0.49 AO356_24560 aminopeptidase
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_4129 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.48 Pf6N2E2_604 Membrane alanine aminopeptidase N (EC 3.4.11.2)
Pseudomonas sp. S08-1 0.66 OH686_12490 Coproporphyrinogen III oxidase, aerobic 0.48 OH686_04270 aminopeptidase N
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00275 coproporphyrinogen III oxidase 0.65 CSW01_07505 aminopeptidase N
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS13525 oxygen-dependent coproporphyrinogen oxidase 0.36 ABZR86_RS15770 aminopeptidase N
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.49 PFLU_RS13095 aminopeptidase N
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_16050 hemF oxygen-dependent coproporphyrinogen oxidase 0.39 OKGIIK_13715 Aminopeptidase N
Pseudomonas fluorescens SBW25 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.49 PFLU_RS13095 aminopeptidase N
Rhodanobacter denitrificans MT42 0.65 LRK55_RS09455 oxygen-dependent coproporphyrinogen oxidase 0.39 LRK55_RS09840 aminopeptidase N low > 63
Pseudomonas simiae WCS417 0.64 PS417_00120 coproporphyrinogen III oxidase 0.48 PS417_12395 aminopeptidase N
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS09795 oxygen-dependent coproporphyrinogen oxidase 0.39 LRK54_RS10200 aminopeptidase N
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_0404 coproporphyrinogen oxidase (EC 1.3.3.3) 0.48 B158DRAFT_1479 aminopeptidase N, Escherichia coli type
Dechlorosoma suillum PS 0.63 Dsui_1597 coproporphyrinogen III oxidase 0.44 Dsui_2287 aminopeptidase N
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS17765 coproporphyrinogen III oxidase 0.48 HSERO_RS17720 aminopeptidase N
Ralstonia solanacearum PSI07 0.62 RPSI07_RS13675 oxygen-dependent coproporphyrinogen oxidase 0.46 RPSI07_RS14040 aminopeptidase N
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS06400 oxygen-dependent coproporphyrinogen-III oxidase 0.45 BPHYT_RS15210 aminopeptidase N low > 109
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS24405 oxygen-dependent coproporphyrinogen oxidase 0.44 QEN71_RS03785 aminopeptidase N
Paraburkholderia graminis OAS925 0.62 ABIE53_001544 coproporphyrinogen III oxidase 0.44 ABIE53_003216 aminopeptidase N low > 113
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03550 coproporphyrinogen III oxidase 0.46 RALBFv3_RS03270 aminopeptidase N
Ralstonia solanacearum UW163 0.62 UW163_RS10120 coproporphyrinogen III oxidase 0.46 UW163_RS10455 aminopeptidase N
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04520 coproporphyrinogen oxidase 0.45 H281DRAFT_03988 alanyl aminopeptidase. Metallo peptidase. MEROPS family M01
Ralstonia solanacearum GMI1000 0.62 RS_RS11000 coproporphyrinogen III oxidase 0.46 RS_RS10660 aminopeptidase N
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS15415 oxygen-dependent coproporphyrinogen oxidase 0.45 ABZR87_RS15120 aminopeptidase N
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS04725 coproporphyrinogen III oxidase 0.46 RR42_RS05200 aminopeptidase N
Variovorax sp. OAS795 0.59 ABID97_RS16730 oxygen-dependent coproporphyrinogen oxidase 0.42 ABID97_RS21770 aminopeptidase N
Variovorax sp. SCN45 0.59 GFF301 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.42 GFF3118 Membrane alanine aminopeptidase N (EC 3.4.11.2)
Acidovorax sp. GW101-3H11 0.59 Ac3H11_2420 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.42 Ac3H11_2633 Membrane alanine aminopeptidase N (EC 3.4.11.2)
Acinetobacter radioresistens SK82 0.58 MPMX26_02746 Oxygen-dependent coproporphyrinogen-III oxidase 0.36 MPMX26_01760 Aminopeptidase N
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF4526 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.40 GFF275 Membrane alanine aminopeptidase N (EC 3.4.11.2)
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02545 oxygen-dependent coproporphyrinogen oxidase 0.39 ABCV34_RS02570 aminopeptidase N low > 48
Azospirillum sp. SherDot2 0.34 MPMX19_05010 Oxygen-dependent coproporphyrinogen-III oxidase 0.49 MPMX19_04335 Aminopeptidase N
Phaeobacter inhibens DSM 17395 0.33 PGA1_c29970 coproporphyrinogen 3 oxidase, aerobic 0.38 PGA1_c09880 aminopeptidase N
Caulobacter crescentus NA1000 0.32 CCNA_00540 coproporphyrinogen III oxidase 0.39 CCNA_02566 membrane alanine aminopeptidase
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_00540 coproporphyrinogen III oxidase 0.39 CCNA_02566 membrane alanine aminopeptidase
Sinorhizobium meliloti 1021 0.31 SMc00180 coproporphyrinogen III oxidase 0.43 SMc02370 aminopeptidase N
Agrobacterium fabrum C58 0.30 Atu2247 coproporphyrinogen III oxidase 0.40 Atu0984 aminopeptidase N
Rhizobium sp. OAE497 0.30 ABIE40_RS13225 oxygen-dependent coproporphyrinogen oxidase 0.41 ABIE40_RS05720 aminopeptidase N
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_3217 coproporphyrinogen oxidase (EC 1.3.3.3) 0.42 Ga0059261_2024 aminopeptidase N, Escherichia coli type

Not shown: 9 genomes with orthologs for HER17_RS17265 only; 3 genomes with orthologs for HER17_RS12010 only