Conservation of cofitness between HER17_RS02805 and HER17_RS08600 in Pectobacterium carotovorum WPP14

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS08600 dihydroorotase 0.94 10
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.82 DDA3937_RS13170 dihydroorotase 0.69 63
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.82 DZA65_RS13710 dihydroorotase 0.61 36
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.81 HGI48_RS13235 dihydroorotase 0.62 50
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.79 EX31_RS24385 dihydroorotase 0.93 54
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.79 IAI46_09740 dihydroorotase 0.84 12
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.72 IAI47_12215 dihydroorotase 0.77 71
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.75 LU632_RS10340 pyrC dihydroorotase — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.78 EX28DRAFT_1869 dihydroorotase (EC 3.5.2.3) — —
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.77 MPMX20_01741 Dihydroorotase 0.78 63
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.75 BWI76_RS10990 dihydroorotase low > 92
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.76 KEDOAH_24025 pyrC dihydroorotase — —
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.76 MCAODC_23090 pyrC dihydroorotase 0.66 83
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.76 ECD_01058 dihydro-orotase low > 61
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.76 EFB2_02912 Dihydroorotase low > 86
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.76 OKFHMN_03730 pyrC dihydroorotase low > 80
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.76 JDDGAC_07390 pyrC dihydroorotase low > 86
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.76 BNILDI_19420 pyrC dihydroorotase low > 75
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.76 HEPCGN_23760 pyrC dihydroorotase 0.76 86
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.76 NIAGMN_24100 pyrC dihydroorotase — —
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.76 NOLOHH_21260 pyrC dihydroorotase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.76 OHPLBJKB_02603 Dihydroorotase low > 73
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.76 b1062 pyrC dihydroorotase (NCBI) 0.80 65
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.76 ECOLIN_RS06160 dihydroorotase 0.40 43
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.75 GFF3342 Dihydroorotase (EC 3.5.2.3) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.55 CSW01_18760 dihydroorotase low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.54 MIT1002_03750 Dihydroorotase — —
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.54 Shew_0728 dihydroorotase (RefSeq) low > 60
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.57 Shewana3_3263 dihydroorotase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.55 SO3695 pyrC dihydroorotase, homodimeric type (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.55 Sama_2870 dihydroorotase (RefSeq) low > 62
Phaeobacter inhibens DSM 17395 0.29 PGA1_c06310 threonine synthase ThrC 0.53 PGA1_c10910 dihydroorotase PyrC — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.55 AO356_18315 dihydroorotase — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.55 Pf6N2E2_5588 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.56 AO353_04115 dihydroorotase — —
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.56 PP_1086 dihydroorotase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.54 Psyr_3894 dihydroorotase — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.54 Psyr_3894 dihydroorotase — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.51 LRK55_RS10600 dihydroorotase low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.49 LRK54_RS10900 dihydroorotase — —
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.54 OH686_03940 dihydroorotase, homodimeric type — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.56 Pf1N1B4_744 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.56 PfGW456L13_1747 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.55 PS417_05630 dihydroorotase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.55 PFLU_RS05715 dihydroorotase — —
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.55 PFR28_03355 Dihydroorotase — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.55 PFLU_RS05715 dihydroorotase — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.49 OKGIIK_12970 pyrC dihydroorotase — —
Sinorhizobium meliloti 1021 0.27 SMc00077 threonine synthase 0.53 SMc02166 dihydroorotase — —
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.54 Psest_3123 dihydroorotase, homodimeric type — —
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.54 Dshi_2371 dihydroorotase, homodimeric type (RefSeq) — —
Agrobacterium fabrum C58 0.26 Atu0787 threonine synthase 0.53 Atu0399 dihydroorotase — —
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.59 MPMX19_01633 Dihydroorotase — —
Rhizobium sp. OAE497 0.26 ABIE40_RS04230 threonine synthase 0.52 ABIE40_RS02105 dihydroorotase — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.58 AZOBR_RS04460 dihydroorotase — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.57 HP15_1216 dihydroorotase, homodimeric type — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.50 ABCV34_RS09730 dihydroorotase — —
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.55 Dsui_0250 dihydroorotase, homodimeric type — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.56 GFF523 Dihydroorotase (EC 3.5.2.3) — —
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.55 ABID97_RS06040 dihydroorotase — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.54 ABZR87_RS07550 dihydroorotase — —
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.54 QEN71_RS26855 dihydroorotase low > 153
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.58 GFF125 Dihydroorotase (EC 3.5.2.3) — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.57 HSERO_RS19235 dihydroorotase — —
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.55 Ac3H11_1963 Dihydroorotase (EC 3.5.2.3) — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.56 RR42_RS02610 dihydroorotase — —
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.54 ABIE53_003505 dihydroorotase — —
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.53 H281DRAFT_04265 dihydroorotase — —
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.55 RS_RS02420 dihydroorotase — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.54 BPHYT_RS16675 dihydroorotase 0.77 7
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.55 RALBFv3_RS11590 dihydroorotase — —
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.55 UW163_RS01995 dihydroorotase — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.55 RPSI07_RS21625 dihydroorotase — —

Not shown: 21 genomes with orthologs for HER17_RS02805 only; 2 genomes with orthologs for HER17_RS08600 only