Conservation of cofitness between HER17_RS06930 and HER17_RS05555 in Pectobacterium carotovorum WPP14

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS06930 50S ribosomal protein L3 N(5)-glutamine methyltransferase 1.0 HER17_RS05555 pantoate--beta-alanine ligase 0.90 4
Dickeya dadantii 3937 0.90 DDA3937_RS14585 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.80 DDA3937_RS15960 pantoate--beta-alanine ligase low > 74
Dickeya dianthicola ME23 0.90 DZA65_RS15470 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.82 DZA65_RS17160 pantoate--beta-alanine ligase low > 75
Dickeya dianthicola 67-19 0.90 HGI48_RS14535 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.78 HGI48_RS16075 pantoate--beta-alanine ligase low > 71
Serratia liquefaciens MT49 0.86 IAI46_18030 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.82 IAI46_21245 pantoate--beta-alanine ligase low > 86
Enterobacter asburiae PDN3 0.85 EX28DRAFT_0274 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.71 EX28DRAFT_3729 pantoate--beta-alanine ligase low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_03265 50S ribosomal protein L3 glutamine methyltransferase 0.71 MPMX20_00826 Pantothenate synthetase low > 85
Rahnella sp. WP5 0.84 EX31_RS19690 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.76 EX31_RS03285 pantoate--beta-alanine ligase low > 89
Klebsiella michiganensis M5al 0.84 BWI76_RS20440 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.72 BWI76_RS04990 pantoate--beta-alanine ligase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF1951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.72 GFF92 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 78
Escherichia fergusonii Becca 0.82 EFB2_01528 50S ribosomal protein L3 glutamine methyltransferase 0.73 EFB2_03911 Pantothenate synthetase low > 86
Escherichia coli BW25113 0.82 b2330 yfcB putative adenine-specific methylase (VIMSS) 0.73 b0133 panC pantoate--beta-alanine ligase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_01375 50S ribosomal protein L3 glutamine methyltransferase 0.73 OHPLBJKB_03528 Pantothenate synthetase low > 73
Escherichia coli ECRC102 0.82 NIAGMN_20385 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.73 NIAGMN_08255 panC pantoate--beta-alanine ligase
Escherichia coli ECRC100 0.82 OKFHMN_22610 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.73 OKFHMN_10405 panC pantoate--beta-alanine ligase low > 80
Escherichia coli ECRC101 0.82 MCAODC_13650 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.73 MCAODC_00920 panC pantoate--beta-alanine ligase low > 87
Escherichia coli ECRC99 0.82 KEDOAH_05585 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.73 KEDOAH_17750 panC pantoate--beta-alanine ligase
Escherichia coli ECRC98 0.82 JDDGAC_26570 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.73 JDDGAC_14000 panC pantoate--beta-alanine ligase low > 86
Erwinia tracheiphila SCR3 0.82 LU632_RS07770 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.75 LU632_RS20105 panC pantoate--beta-alanine ligase low > 74
Escherichia coli BL21 0.82 ECD_02255 N5-glutamine methyltransferase 0.73 ECD_00132 pantothenate synthetase low > 61
Escherichia coli ECOR38 0.82 HEPCGN_21815 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.73 HEPCGN_08380 panC pantoate--beta-alanine ligase low > 87
Escherichia coli ECRC62 0.82 BNILDI_13165 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.73 BNILDI_08920 panC pantoate--beta-alanine ligase low > 75
Pantoea sp. MT58 0.82 IAI47_06145 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.77 IAI47_15660 pantoate--beta-alanine ligase low > 76
Escherichia coli ECOR27 0.81 NOLOHH_14245 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.73 NOLOHH_02750 panC pantoate--beta-alanine ligase low > 75
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_10570 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.61 CSW01_03130 pantoate--beta-alanine ligase
Shewanella loihica PV-4 0.64 Shew_2417 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) 0.49 Shew_3134 pantoate--beta-alanine ligase (RefSeq)
Shewanella amazonensis SB2B 0.63 Sama_2160 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) 0.51 Sama_0775 panC pantoate--beta-alanine ligase (RefSeq)
Shewanella sp. ANA-3 0.63 Shewana3_1468 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) 0.51 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq)
Shewanella oneidensis MR-1 0.60 SO3080 hemK family protein (NCBI ptt file) 0.51 SO0869 panC pantoate--beta-alanine ligase (NCBI ptt file)
Alteromonas macleodii MIT1002 0.58 MIT1002_01228 50S ribosomal protein L3 glutamine methyltransferase 0.48 MIT1002_03695 Pantothenate synthetase
Pseudomonas sp. S08-1 0.56 OH686_00665 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.56 OH686_17240 pantoate--beta-alanine ligase
Pseudomonas stutzeri RCH2 0.55 Psest_1995 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.52 Psest_0995 pantoate--beta-alanine ligase
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_5819 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.52 Pf6N2E2_5152 Pantoate--beta-alanine ligase (EC 6.3.2.1)
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_19525 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.52 AO356_16055 pantoate--beta-alanine ligase
Pseudomonas sp. RS175 0.54 PFR28_03129 50S ribosomal protein L3 glutamine methyltransferase 0.52 PFR28_03722 Pantothenate synthetase
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_3777 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.51 Pf1N1B4_2853 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_02265 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.52 AO353_14380 pantoate--beta-alanine ligase low > 101
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_1850 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.53 Psyr_0827 pantothenate synthetase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_1850 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.53 Psyr_0827 pantothenate synthetase low > 86
Pseudomonas fluorescens SBW25 0.53 PFLU_RS21295 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.48 PFLU_RS25755 pantoate--beta-alanine ligase low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS21295 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.48 PFLU_RS25755 pantoate--beta-alanine ligase low > 109
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4168 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.52 PfGW456L13_1520 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 87
Marinobacter adhaerens HP15 0.53 HP15_1839 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.51 HP15_323 pantothenate synthetase
Pseudomonas simiae WCS417 0.53 PS417_19330 SAM-dependent methyltransferase 0.49 PS417_23915 pantoate--beta-alanine ligase
Pseudomonas putida KT2440 0.53 PP_1827 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.51 PP_4700 pantothenate synthetase low > 96
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_1297 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase (EC 2.1.1.-) 0.48 B158DRAFT_0062 pantoate--beta-alanine ligase
Acinetobacter radioresistens SK82 0.46 MPMX26_01339 50S ribosomal protein L3 glutamine methyltransferase 0.43 MPMX26_00546 Pantothenate synthetase
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS08050 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.45 ABZR86_RS00820 pantoate--beta-alanine ligase
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1953.1 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.41 Xcc-8004.3051.1 Pantoate--beta-alanine ligase (EC 6.3.2.1)
Castellaniella sp019104865 MT123 0.45 ABCV34_RS05175 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.33 ABCV34_RS14585 pantoate--beta-alanine ligase
Rhodanobacter denitrificans MT42 0.44 LRK55_RS01515 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.44 LRK55_RS14835 pantoate--beta-alanine ligase low > 63
Azospirillum brasilense Sp245 0.44 AZOBR_RS10950 SAM-dependent methyltransferase 0.41 AZOBR_RS09715 pantoate--beta-alanine ligase low > 97
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_04795 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.44 OKGIIK_03890 panC pantoate--beta-alanine ligase low > 52
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS01735 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.44 LRK54_RS15120 pantoate--beta-alanine ligase
Azospirillum sp. SherDot2 0.43 MPMX19_00751 50S ribosomal protein L3 glutamine methyltransferase 0.39 MPMX19_04465 Pantothenate synthetase low > 112
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS06350 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.34 QEN71_RS25065 pantoate--beta-alanine ligase
Dechlorosoma suillum PS 0.43 Dsui_2712 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.37 Dsui_1470 pantoate--beta-alanine ligase
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS10785 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.39 HSERO_RS15520 pantoate--beta-alanine ligase
Lysobacter sp. OAE881 0.42 ABIE51_RS08215 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.47 ABIE51_RS08030 pantoate--beta-alanine ligase
Paraburkholderia graminis OAS925 0.42 ABIE53_002520 ribosomal protein L3 glutamine methyltransferase 0.33 ABIE53_001260 pantoate--beta-alanine ligase
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS00290 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.37 RALBFv3_RS04435 pantoate--beta-alanine ligase
Ralstonia solanacearum UW163 0.42 UW163_RS13620 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.37 UW163_RS09235 pantoate--beta-alanine ligase
Ralstonia solanacearum GMI1000 0.41 RS_RS06960 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.38 RS_RS11985 pantoate--beta-alanine ligase
Ralstonia solanacearum PSI07 0.41 RPSI07_RS17185 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.37 RPSI07_RS12935 pantoate--beta-alanine ligase
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS11740 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.36 ABZR87_RS00030 pantoate--beta-alanine ligase
Rhodopseudomonas palustris CGA009 0.40 TX73_005990 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.41 TX73_016310 pantoate--beta-alanine ligase
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_00596 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.34 H281DRAFT_00150 pantothenate synthetase
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS12205 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.33 BPHYT_RS04925 pantothenate synthetase
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS11955 SAM-dependent methyltransferase 0.34 RR42_RS16055 pantothenate synthetase
Variovorax sp. SCN45 0.36 GFF258 Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) 0.39 GFF2578 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 127
Variovorax sp. OAS795 0.35 ABID97_RS16650 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.39 ABID97_RS07430 pantoate--beta-alanine ligase low > 91
Acidovorax sp. GW101-3H11 0.34 Ac3H11_2299 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.33 Ac3H11_3840 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4549 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.34 GFF1220 Pantoate--beta-alanine ligase (EC 6.3.2.1)

Not shown: 1 genomes with orthologs for HER17_RS06930 only; 25 genomes with orthologs for HER17_RS05555 only