Conservation of cofitness between HEPCGN_08480 and HEPCGN_09285 in Escherichia coli ECOR38

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_08480 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.0 HEPCGN_09285 prfC peptide chain release factor 3 0.77 41
Escherichia coli ECRC62 1.00 BNILDI_08765 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 BNILDI_08000 prfC peptide chain release factor 3 low > 75
Escherichia coli ECOR27 1.00 NOLOHH_02845 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 NOLOHH_03600 prfC peptide chain release factor 3 low > 75
Escherichia coli ECRC99 1.00 KEDOAH_17655 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 KEDOAH_16865 prfC peptide chain release factor 3
Escherichia coli ECRC98 1.00 JDDGAC_14095 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 JDDGAC_14875 prfC peptide chain release factor 3
Escherichia coli ECRC102 1.00 NIAGMN_08350 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 NIAGMN_09130 prfC peptide chain release factor 3
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03547 Pyruvate dehydrogenase E1 component 1.00 OHPLBJKB_03687 Peptide chain release factor RF3
Escherichia coli BW25113 1.00 b0114 aceE pyruvate dehydrogenase subunit E1 (NCBI) 1.00 b4375 prfC peptide chain release factor 3 (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00640 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 ECOLIN_RS25110 peptide chain release factor 3 0.71 28
Escherichia coli ECRC101 1.00 MCAODC_01015 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 MCAODC_01795 prfC peptide chain release factor 3
Escherichia coli ECRC100 1.00 OKFHMN_10500 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 1.00 OKFHMN_11280 prfC peptide chain release factor 3
Escherichia fergusonii Becca 1.00 EFB2_03931 Pyruvate dehydrogenase E1 component 1.00 EFB2_04072 Peptide chain release factor RF3 low > 86
Escherichia coli BL21 1.00 ECD_00113 pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 1.00 ECD_04250 peptide chain release factor RF-3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.97 GFF1035 Peptide chain release factor 3 0.74 76
Klebsiella michiganensis M5al 0.96 BWI76_RS04880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.97 BWI76_RS04100 peptide chain release factor 3
Enterobacter sp. TBS_079 0.95 MPMX20_00807 Pyruvate dehydrogenase E1 component 0.95 MPMX20_00673 Peptide chain release factor RF3 low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3710 pyruvate dehydrogenase E1 component, homodimeric type 0.95 EX28DRAFT_3583 peptide chain release factor 3 0.61 65
Pectobacterium carotovorum WPP14 0.92 HER17_RS03290 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 HER17_RS19065 peptide chain release factor 3
Pantoea sp. MT58 0.92 IAI47_15810 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 IAI47_03375 peptide chain release factor 3 low > 76
Erwinia tracheiphila SCR3 0.92 LU632_RS03080 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.89 LU632_RS02475 prfC peptide chain release factor 3
Dickeya dadantii 3937 0.91 DDA3937_RS17925 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 DDA3937_RS02445 peptide chain release factor 3
Dickeya dianthicola ME23 0.91 DZA65_RS19000 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 DZA65_RS02505 peptide chain release factor 3
Dickeya dianthicola 67-19 0.91 HGI48_RS17850 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 HGI48_RS02400 peptide chain release factor 3
Rahnella sp. WP5 0.91 EX31_RS03480 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 EX31_RS04095 peptide chain release factor 3
Serratia liquefaciens MT49 0.90 IAI46_21325 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 IAI46_02875 peptide chain release factor 3 low > 86
Shewanella amazonensis SB2B 0.74 Sama_0375 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.85 Sama_0968 prfC peptide chain release factor 3 (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_12220 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.86 CSW01_03470 peptide chain release factor 3
Shewanella sp. ANA-3 0.69 Shewana3_0426 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.79 Shewana3_1037 prfC peptide chain release factor 3 (RefSeq) low > 73
Shewanella loihica PV-4 0.69 Shew_3431 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.79 Shew_2820 prfC peptide chain release factor 3 (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.66 MIT1002_03003 Pyruvate dehydrogenase E1 component 0.82 MIT1002_01192 Peptide chain release factor 3 low > 70
Kangiella aquimarina DSM 16071 0.65 B158DRAFT_2144 pyruvate dehydrogenase E1 component, homodimeric type 0.76 B158DRAFT_2239 peptide chain release factor 3 low > 40
Dinoroseobacter shibae DFL-12 0.62 Dshi_1968 2-oxo-acid dehydrogenase E1 subunit, homodimeric type (RefSeq) 0.44 Dshi_1336 peptide chain release factor 3 (RefSeq) 0.42 15
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS07365 pyruvate dehydrogenase 0.61 RR42_RS37475 peptide chain release factor 3 low > 128
Acidovorax sp. GW101-3H11 0.61 Ac3H11_4093 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.52 Ac3H11_3041 Peptide chain release factor 3
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS13470 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.61 ABZR87_RS23485 peptide chain release factor 3
Ralstonia solanacearum PSI07 0.61 RPSI07_RS15815 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.61 RPSI07_RS07810 peptide chain release factor 3
Pseudomonas putida KT2440 0.60 PP_0339 Pyruvate dehydrogenase E1 component 0.67 PP_0872 Peptide chain release factor 3 low > 96
Ralstonia solanacearum GMI1000 0.60 RS_RS08055 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.61 RS_RS25080 peptide chain release factor 3
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_214 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.68 PfGW456L13_5060 Peptide chain release factor 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.67 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3)
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.67 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3)
Ralstonia solanacearum UW163 0.60 UW163_RS14980 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.61 UW163_RS16595 peptide chain release factor 3
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS01670 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.61 RALBFv3_RS23345 peptide chain release factor 3
Pseudomonas stutzeri RCH2 0.60 Psest_0448 pyruvate dehydrogenase E1 component, homodimeric type 0.68 Psest_3351 peptide chain release factor 3
Pseudomonas sp. S08-1 0.60 OH686_09710 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.68 OH686_08765 peptide chain release factor 3
Pseudomonas sp. RS175 0.60 PFR28_05061 Pyruvate dehydrogenase E1 component 0.68 PFR28_00118 Peptide chain release factor RF3
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_3674 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.68 Pf6N2E2_3327 Peptide chain release factor 3
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_08960 pyruvate dehydrogenase 0.68 AO356_07285 peptide chain release factor 3
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.68 PFLU_RS04070 peptide chain release factor 3 low > 109
Pseudomonas fluorescens SBW25 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.68 PFLU_RS04070 peptide chain release factor 3 low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF4890 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.52 GFF768 Peptide chain release factor 3 low > 90
Dechlorosoma suillum PS 0.59 Dsui_1578 pyruvate dehydrogenase E1 component, homodimeric type 0.60 Dsui_2418 peptide chain release factor 3 low > 51
Pseudomonas simiae WCS417 0.59 PS417_02220 pyruvate dehydrogenase 0.68 PS417_04030 peptide chain release factor 3
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_12865 pyruvate dehydrogenase 0.68 AO353_05420 peptide chain release factor 3
Variovorax sp. SCN45 0.59 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.52 GFF2045 Peptide chain release factor 3 low > 127
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_00466 pyruvate dehydrogenase E1 component 0.52 H281DRAFT_03538 bacterial peptide chain release factor 3 (bRF-3)
Paraburkholderia graminis OAS925 0.59 ABIE53_002793 pyruvate dehydrogenase E1 component 0.52 ABIE53_004717 peptide chain release factor 3
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS07305 pyruvate dehydrogenase 0.62 HSERO_RS14640 peptide chain release factor 3
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS12840 pyruvate dehydrogenase 0.52 BPHYT_RS34275 peptide chain release factor 3 low > 109
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS05725 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.51 QEN71_RS17200 peptide chain release factor 3
Castellaniella sp019104865 MT123 0.58 ABCV34_RS04160 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.54 ABCV34_RS12505 peptide chain release factor 3
Lysobacter sp. OAE881 0.57 ABIE51_RS18795 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 ABIE51_RS16210 peptide chain release factor 3
Marinobacter adhaerens HP15 0.57 HP15_3046 pyruvate dehydrogenase subunit E1 0.80 HP15_541 peptide chain release factor 3
Acinetobacter radioresistens SK82 0.57 MPMX26_02925 Pyruvate dehydrogenase E1 component 0.67 MPMX26_00476 Peptide chain release factor RF3 low > 36
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.754.1 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.63 Xcc-8004.1590.1 Peptide chain release factor 3
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS12410 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.67 ABZR86_RS19000 peptide chain release factor 3
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_12700 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 OKGIIK_01430 prfC peptide chain release factor 3
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS11175 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 LRK54_RS05380 peptide chain release factor 3
Rhodanobacter denitrificans MT42 0.53 LRK55_RS10880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.66 LRK55_RS05155 peptide chain release factor 3
Bosea sp. OAE506 0.08 ABIE41_RS08425 transketolase 0.47 ABIE41_RS06180 peptide chain release factor 3 low > 77
Caulobacter crescentus NA1000 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.43 CCNA_01123 peptide chain release factor RF-3 low > 66
Caulobacter crescentus NA1000 Δfur 0.07 CCNA_01263 pyruvate dehydrogenase E1 component 0.43 CCNA_01123 peptide chain release factor RF-3 low > 67
Phaeobacter inhibens DSM 17395 0.07 PGA1_c16590 transketolase-like protein 0.46 PGA1_c10620 peptide chain release factor 3
Azospirillum sp. SherDot2 0.07 MPMX19_03172 Pyruvate dehydrogenase E1 component 0.50 MPMX19_01192 Peptide chain release factor 3

Not shown: 3 genomes with orthologs for HEPCGN_08480 only; 20 genomes with orthologs for HEPCGN_09285 only