Conservation of cofitness between GFF829 and GFF5731 in Hydrogenophaga sp. GW460-11-11-14-LB1

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF829 DNA repair protein RecN 1.0 GFF5731 3'-to-5' oligoribonuclease (orn) 0.78 6
Acidovorax sp. GW101-3H11 0.59 Ac3H11_3460 DNA repair protein RecN 0.75 Ac3H11_1677 3'-to-5' oligoribonuclease (orn) low > 79
Variovorax sp. SCN45 0.59 GFF2357 DNA repair protein RecN 0.78 GFF3960 3'-to-5' oligoribonuclease (orn) 0.67 51
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26535 DNA repair protein RecN 0.63 QEN71_RS04255 oligoribonuclease — —
Ralstonia solanacearum UW163 0.45 UW163_RS08210 DNA repair protein RecN 0.64 UW163_RS15860 oligoribonuclease — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS05415 DNA repair protein RecN 0.64 RALBFv3_RS13950 oligoribonuclease — —
Ralstonia solanacearum PSI07 0.45 RPSI07_RS11890 DNA repair protein RecN 0.64 RPSI07_RS19520 oligoribonuclease — —
Ralstonia solanacearum GMI1000 0.44 RS_RS13275 DNA repair protein RecN 0.64 RS_RS04685 oligoribonuclease — —
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS01065 DNA repair protein RecN 0.62 ABZR87_RS09645 oligoribonuclease — —
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS05910 DNA repair protein 0.63 RR42_RS14770 oligoribonuclease — —
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_04692 DNA replication and repair protein RecN 0.61 H281DRAFT_04301 oligoribonuclease — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS03060 DNA repair protein 0.62 HSERO_RS07210 oligoribonuclease — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS07470 DNA repair protein RecN 0.65 ABCV34_RS06995 oligoribonuclease — —
Paraburkholderia graminis OAS925 0.43 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.62 ABIE53_003119 oligoribonuclease — —
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS03560 DNA repair protein 0.61 BPHYT_RS14720 oligoribonuclease — —
Dechlorosoma suillum PS 0.42 Dsui_3072 DNA repair protein RecN 0.57 Dsui_3222 oligoribonuclease (3'->5' exoribonuclease) — —
Enterobacter sp. TBS_079 0.37 MPMX20_03486 DNA repair protein RecN 0.56 MPMX20_00443 Oligoribonuclease — —
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2719 DNA repair protein RecN 0.55 EX28DRAFT_3360 Oligoribonuclease (3'->5' exoribonuclease) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF4162 DNA repair protein RecN 0.55 GFF1989 '3'-to-5' oligoribonuclease (orn)' transl_table=11 — —
Pseudomonas sp. S08-1 0.36 OH686_17050 DNA repair protein RecN 0.53 OH686_09505 3'-to-5' oligoribonuclease (orn) low > 80
Dickeya dadantii 3937 0.35 DDA3937_RS04325 DNA repair protein RecN 0.54 DDA3937_RS18940 oligoribonuclease — —
Pantoea sp. MT58 0.35 IAI47_04810 DNA repair protein RecN 0.55 IAI47_02540 oligoribonuclease — —
Klebsiella michiganensis M5al 0.35 BWI76_RS21560 DNA repair protein RecN 0.56 BWI76_RS02480 oligoribonuclease — —
Dickeya dianthicola ME23 0.35 DZA65_RS04235 DNA repair protein RecN 0.54 DZA65_RS20150 oligoribonuclease — —
Dickeya dianthicola 67-19 0.35 HGI48_RS04320 DNA repair protein RecN 0.54 HGI48_RS19035 oligoribonuclease — —
Shewanella amazonensis SB2B 0.35 Sama_1026 recombination and repair protein (RefSeq) 0.50 Sama_3032 oligoribonuclease (RefSeq) — —
Serratia liquefaciens MT49 0.35 IAI46_19635 DNA repair protein RecN 0.55 IAI46_01575 oligoribonuclease — —
Escherichia coli BW25113 0.35 b2616 recN recombination and repair protein (NCBI) 0.56 b4162 yjeR orf, hypothetical protein (VIMSS) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01091 DNA repair protein RecN 0.56 OHPLBJKB_03880 Oligoribonuclease — —
Escherichia coli BL21 0.35 ECD_02504 recombination and repair protein 0.56 ECD_04032 oligoribonuclease — —
Escherichia coli ECOR38 0.35 HEPCGN_20265 recN DNA repair protein RecN 0.56 HEPCGN_10540 orn oligoribonuclease — —
Escherichia coli ECOR27 0.35 NOLOHH_12815 recN DNA repair protein RecN 0.56 NOLOHH_04575 orn oligoribonuclease — —
Escherichia coli ECRC62 0.35 BNILDI_11620 recN DNA repair protein RecN 0.56 BNILDI_06915 orn oligoribonuclease — —
Shewanella sp. ANA-3 0.35 Shewana3_1104 recombination and repair protein (RefSeq) 0.53 Shewana3_0590 oligoribonuclease (RefSeq) — —
Escherichia fergusonii Becca 0.35 EFB2_01277 DNA repair protein RecN 0.56 EFB2_04373 Oligoribonuclease — —
Rahnella sp. WP5 0.35 EX31_RS21760 DNA repair protein RecN 0.55 EX31_RS08865 oligoribonuclease — —
Escherichia coli Nissle 1917 0.35 ECOLIN_RS14775 DNA repair protein RecN 0.56 ECOLIN_RS24180 oligoribonuclease — —
Escherichia coli ECRC101 0.35 OKFHMN_21145 recN DNA repair protein RecN 0.56 OKFHMN_12315 orn oligoribonuclease — —
Escherichia coli ECRC101 0.35 MCAODC_11670 recN DNA repair protein RecN 0.56 MCAODC_02825 orn oligoribonuclease — —
Escherichia coli ECRC102 0.35 NIAGMN_18915 recN DNA repair protein RecN 0.56 NIAGMN_10160 orn oligoribonuclease — —
Escherichia coli ECRC99 0.35 KEDOAH_07075 recN DNA repair protein RecN 0.56 KEDOAH_15850 orn oligoribonuclease — —
Pectobacterium carotovorum WPP14 0.35 HER17_RS17420 DNA repair protein RecN 0.55 HER17_RS02415 oligoribonuclease — —
Escherichia coli ECRC98 0.35 JDDGAC_24810 recN DNA repair protein RecN 0.56 JDDGAC_15950 orn oligoribonuclease — —
Shewanella oneidensis MR-1 0.35 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.53 SO0592 orn oligoribonuclease (NCBI ptt file) — —
Marinobacter adhaerens HP15 0.34 HP15_3084 DNA repair protein RecN 0.53 HP15_2506 oligoribonuclease — —
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_3370 DNA repair protein RecN 0.52 Pf6N2E2_3622 3'-to-5' oligoribonuclease (orn) — —
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_0601 DNA replication and repair protein RecN 0.52 B158DRAFT_1946 Oligoribonuclease (3'->5' exoribonuclease) — —
Pseudomonas sp. RS175 0.33 PFR28_00071 DNA repair protein RecN 0.52 PFR28_05113 Oligoribonuclease — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_4197 DNA replication and repair protein RecN 0.51 Psyr_0564 Exonuclease — —
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_4197 DNA replication and repair protein RecN 0.51 Psyr_0564 Exonuclease — —
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_5106 DNA repair protein RecN 0.51 PfGW456L13_162 3'-to-5' oligoribonuclease (orn) — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_07510 DNA repair protein RecN 0.53 AO356_08695 oligoribonuclease — —
Pseudomonas stutzeri RCH2 0.33 Psest_0962 DNA repair protein RecN 0.54 Psest_0500 Oligoribonuclease (3'->5' exoribonuclease) — —
Pseudomonas simiae WCS417 0.33 PS417_24070 recombination and repair protein 0.53 PS417_02450 oligoribonuclease — —
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_1178 DNA repair protein RecN 0.50 Pf1N1B4_1420 3'-to-5' oligoribonuclease (orn) — —
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_05660 DNA repair protein RecN 0.52 AO353_13105 oligoribonuclease — —
Erwinia tracheiphila SCR3 0.33 LU632_RS16985 recN DNA repair protein RecN 0.54 LU632_RS01950 orn oligoribonuclease — —
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_04395 DNA repair protein RecN 0.51 CSW01_01765 oligoribonuclease — —
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS25910 DNA repair protein RecN 0.53 PFLU_RS02530 oligoribonuclease — —
Pseudomonas fluorescens SBW25 0.33 PFLU_RS25910 DNA repair protein RecN 0.53 PFLU_RS02530 oligoribonuclease — —
Shewanella loihica PV-4 0.32 Shew_1196 recombination and repair protein (RefSeq) 0.54 Shew_0559 oligoribonuclease (RefSeq) — —
Pseudomonas putida KT2440 0.32 PP_4729 factor used in recombination and DNA repair 0.53 PP_4902 Oligoribonuclease low > 96
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS05665 DNA repair protein RecN 0.45 ABZR86_RS01910 oligoribonuclease — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.3431.1 DNA repair protein RecN 0.47 Xcc-8004.2410.1 3'-to-5' oligoribonuclease (orn) — —
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS17960 DNA repair protein RecN 0.44 LRK54_RS17470 oligoribonuclease — —
Rhodanobacter denitrificans MT42 0.30 LRK55_RS17815 DNA repair protein RecN 0.44 LRK55_RS17690 oligoribonuclease — —
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_07340 recN DNA repair protein RecN 0.45 OKGIIK_07465 orn oligoribonuclease — —
Lysobacter sp. OAE881 0.29 ABIE51_RS11655 DNA repair protein RecN 0.46 ABIE51_RS09510 oligoribonuclease — —
Alteromonas macleodii MIT1002 0.29 MIT1002_01443 Recombination protein N 0.53 MIT1002_00496 Oligoribonuclease — —
Acinetobacter radioresistens SK82 0.27 MPMX26_00239 DNA repair protein RecN 0.50 MPMX26_02630 Oligoribonuclease — —
Bifidobacterium breve UCC2003 0.19 BBR_RS14030 DNA repair protein RecN 0.35 BBR_RS18035 oligoribonuclease low > 34

Not shown: 29 genomes with orthologs for GFF829 only; 1 genomes with orthologs for GFF5731 only