| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | 1.0 | GFF4447 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) | 0.90 | 17 |
| Variovorax sp. OAS795 | 0.95 | ABID97_RS06335 | | metalloprotease TldD | 0.97 | ABID97_RS06345 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.86 | Ac3H11_4036 | | TldD protein, part of TldE/TldD proteolytic complex | 0.86 | Ac3H11_4034 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.85 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.84 | GFF581 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 90 |
| Herbaspirillum seropedicae SmR1 | 0.73 | HSERO_RS07155 | | peptidase C69 | 0.62 | HSERO_RS07160 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.73 | RR42_RS05875 | | protease TldD | 0.61 | RR42_RS05860 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.72 | ABZR87_RS01105 | | metalloprotease TldD | 0.62 | ABZR87_RS01110 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.72 | RS_RS13315 | | metalloprotease TldD | 0.63 | RS_RS13320 | | 3-deoxy-7-phosphoheptulonate synthase | 0.53 | 28 |
| Burkholderia phytofirmans PsJN | 0.72 | BPHYT_RS03540 | | peptidase C69 | 0.61 | BPHYT_RS03535 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 109 |
| Ralstonia solanacearum UW163 | 0.72 | UW163_RS08170 | | metalloprotease TldD | 0.62 | UW163_RS08165 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.72 | RALBFv3_RS05455 | | metalloprotease TldD | 0.62 | RALBFv3_RS05460 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS26555 | | metalloprotease TldD | 0.62 | QEN71_RS26560 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS11850 | | metalloprotease TldD | 0.62 | RPSI07_RS11845 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.61 | H281DRAFT_04687 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.71 | ABIE53_000851 | | TldD protein | 0.61 | ABIE53_000850 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 113 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS02590 | | metalloprotease TldD | 0.57 | ABCV34_RS06825 | | 3-deoxy-7-phosphoheptulonate synthase AroG | — | — |
| Dechlorosoma suillum PS | 0.67 | Dsui_3401 | | putative Zn-dependent protease-like protein | 0.62 | Dsui_3444 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.62 | ABZR86_RS21715 | | metalloprotease TldD | 0.58 | ABZR86_RS00390 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.61 | OKGIIK_10280 | tldD | metalloprotease TldD | 0.57 | OKGIIK_09785 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS03145 | | metalloprotease TldD | 0.59 | LRK55_RS02485 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 63 |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00227 | | protease TldD | 0.46 | MIT1002_01314 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 70 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.59 | Xcc-8004.1883.1 | | TldD protein, part of TldE/TldD proteolytic complex | 0.56 | Xcc-8004.704.1 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS03395 | | metalloprotease TldD | 0.59 | LRK54_RS02730 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 59 |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | 0.57 | Shewana3_3528 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | low | > 73 |
| Pseudomonas putida KT2440 | 0.58 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | 0.47 | PP_2324 | | tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 96 |
| Pantoea sp. MT58 | 0.58 | IAI47_02465 | | metalloprotease TldD | 0.56 | IAI47_13605 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 76 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.46 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.46 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | low | > 86 |
| Shewanella oneidensis MR-1 | 0.57 | SO4091 | tldD | tldD protein (NCBI ptt file) | 0.57 | SO0756 | aroG | phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.56 | Shew_0410 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.57 | Shew_0851 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | low | > 60 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_22685 | | metalloprotease TldD | 0.56 | IAI46_06405 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.46 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_05215 | | protease TldD | 0.46 | AO353_19030 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.46 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_04285 | | protease TldD | 0.46 | PS417_08430 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.46 | Psest_2331 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 67 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS01460 | | metalloprotease TldD | 0.56 | DDA3937_RS06560 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 74 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS01380 | | metalloprotease TldD | 0.57 | HGI48_RS06605 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 71 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_00161 | | Metalloprotease TldD | 0.47 | PFR28_00962 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | 0.46 | Pf1N1B4_289 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_07095 | | protease TldD | 0.46 | AO356_03200 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 104 |
| Pseudomonas sp. S08-1 | 0.55 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.46 | OH686_01760 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 80 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_04151 | | Metalloprotease TldD | 0.57 | MPMX20_01381 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive | low | > 85 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | 0.47 | Pf6N2E2_2470 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 103 |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS01440 | | metalloprotease TldD | 0.56 | DZA65_RS06960 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 75 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | 0.46 | PfGW456L13_2224 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 87 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS25470 | | metalloprotease TldD | 0.57 | BWI76_RS08600 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_00460 | | Metalloprotease TldD | 0.57 | OHPLBJKB_02959 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive | low | > 73 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_08275 | tldD | metalloprotease TldD | 0.57 | MCAODC_25960 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 87 |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_02220 | | metalloprotease TldD | 0.59 | CSW01_19270 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 62 |
| Escherichia coli ECRC62 | 0.55 | BNILDI_01980 | tldD | metalloprotease TldD | 0.56 | BNILDI_21165 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS20140 | | metalloprotease TldD | 0.56 | HER17_RS14805 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 75 |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_17755 | tldD | metalloprotease TldD | 0.57 | OKFHMN_06740 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 80 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_16620 | tldD | metalloprotease TldD | 0.57 | HEPCGN_01535 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 87 |
| Escherichia coli BW25113 | 0.55 | b3244 | tldD | predicted peptidase (NCBI) | 0.57 | b0754 | aroG | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.55 | EFB2_00586 | | Metalloprotease TldD | 0.57 | EFB2_03352 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | 0.57 | GFF8 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_09555 | tldD | metalloprotease TldD | 0.57 | NOLOHH_23170 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 75 |
| Escherichia coli BL21 | 0.55 | ECD_03104 | | putative peptidase | 0.57 | ECD_00707 | | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible | low | > 61 |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_15515 | tldD | metalloprotease TldD | 0.57 | NIAGMN_04790 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | — | — |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS18595 | | metalloprotease TldD | 0.57 | ECOLIN_RS04015 | | 3-deoxy-7-phosphoheptulonate synthase AroG | — | — |
| Shewanella amazonensis SB2B | 0.55 | Sama_0474 | | TldD protein (RefSeq) | 0.56 | Sama_0657 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | low | > 62 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_10395 | tldD | metalloprotease TldD | 0.57 | KEDOAH_21225 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | — | — |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_21380 | tldD | metalloprotease TldD | 0.57 | JDDGAC_10395 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 86 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.57 | EX28DRAFT_2241 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) | low | > 76 |
| Rahnella sp. WP5 | 0.54 | EX31_RS12265 | | metalloprotease TldD | 0.56 | EX31_RS23545 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS21420 | tldD | metalloprotease TldD | 0.56 | LU632_RS15925 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.52 | B158DRAFT_2072 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.45 | B158DRAFT_1384 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) | low | > 40 |
| Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.56 | CCNA_01463 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.56 | CCNA_01463 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 66 |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_004255 | | metalloprotease TldD | 0.54 | TX73_000140 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 86 |
| Synechococcus elongatus PCC 7942 | 0.20 | Synpcc7942_1127 | tldD | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.45 | Synpcc7942_2501 | aroF | phospho-2-dehydro-3-heoxyheptonate aldolase | — | — |
Not shown: 18 genomes with orthologs for GFF4449 only; 3 genomes with orthologs for GFF4447 only