Conservation of cofitness between PS417_20050 and PS417_20030 in Pseudomonas simiae WCS417

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20050 cobalamin biosynthesis protein CobD 1.0 PS417_20030 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.32 13
Pseudomonas fluorescens SBW25 0.98 PFLU_RS22015 cobalamin biosynthesis protein 0.87 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.64 93
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS22015 cobalamin biosynthesis protein 0.87 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.53 21
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_3709 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.83 Pf1N1B4_3713 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 87
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_02625 cobalamin biosynthesis protein CobD 0.84 AO353_02605 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.79 7
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_4240 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.83 PfGW456L13_4236 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.52 37
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_3678 adenosylcobinamide-phosphate synthase 0.77 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_3678 adenosylcobinamide-phosphate synthase 0.77 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 0.53 8
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_5740 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.79 Pf6N2E2_5744 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_19150 cobalamin biosynthesis protein CobD 0.76 AO356_19170 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.62 11
Pseudomonas sp. RS175 0.84 PFR28_03206 Cobalamin biosynthesis protein CobD 0.76 PFR28_03202 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.41 23
Pseudomonas putida KT2440 0.84 PP_1675 Subunit of adenosylcobinamide-phosphate synthase beta component 0.68 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.60 17
Pseudomonas sp. S08-1 0.70 OH686_04975 cobalamin biosynthesis protein CobD 0.54 OH686_04955 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 80
Pseudomonas stutzeri RCH2 0.65 Psest_3010 cobalamin biosynthesis protein CobD 0.55 Psest_3006 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.28 14
Lysobacter sp. OAE881 0.53 ABIE51_RS04955 adenosylcobinamide-phosphate synthase CbiB 0.49 ABIE51_RS04975 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 62
Dechlorosoma suillum PS 0.52 Dsui_0541 cobalamin biosynthesis protein CobD 0.35 Dsui_0472 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 51
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_05490 cbiB adenosylcobinamide-phosphate synthase CbiB 0.52 OKGIIK_05510 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 52
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS10910 adenosylcobinamide-phosphate synthase CbiB 0.49 ABZR86_RS10890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 74
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS25105 adenosylcobinamide-phosphate synthase CbiB 0.35 QEN71_RS25130 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 153
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1395.1 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.50 Xcc-8004.1398.1 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 74
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS04890 cobalamin biosynthesis protein CobD 0.34 BPHYT_RS04865 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 109
Ralstonia solanacearum PSI07 0.50 RPSI07_RS12915 cobalamin biosynthesis protein 0.38 RPSI07_RS12890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 81
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS00050 adenosylcobinamide-phosphate synthase CbiB 0.32 ABZR87_RS00075 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 80
Ralstonia solanacearum UW163 0.48 UW163_RS09215 cobalamin biosynthesis protein 0.38 UW163_RS09190 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS04455 cobalamin biosynthesis protein 0.38 RALBFv3_RS04480 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 76
Ralstonia solanacearum GMI1000 0.47 RS_RS12010 cobalamin biosynthesis protein 0.34 RS_RS12035 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_00144 adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.36 H281DRAFT_00139 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS13240 cobalamin biosynthesis protein CobD 0.32 HSERO_RS09770 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.82 2
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS16085 cobalamin biosynthesis protein CobD 0.35 RR42_RS16120 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 128
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS01385 cobalamin biosynthesis protein CobD 0.32 HMPREF1058_RS01275 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.82 10
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS15670 cobalamin biosynthesis protein CobD 0.32 ABI39_RS16455 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.94 3
Mycobacterium tuberculosis H37Rv 0.27 Rv2236c Probable cobalamin biosynthesis transmembrane protein CobD 0.26 Rv2207 Probable nicotinate-nucleotide-dimethylbenzimidazol phosphoribosyltransferase CobT — —
Bacteroides stercoris CC31F 0.26 HMPREF1181_RS15670 cobalamin biosynthesis protein CobD 0.34 HMPREF1181_RS15655 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.44 17
Phaeobacter inhibens DSM 17395 0.26 PGA1_c00820 putative cobalamin biosynthesis protein CobD 0.33 PGA1_c07570 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase CobT — —
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS17695 adenosylcobinamide-phosphate synthase CbiB 0.34 HMPREF1078_RS17680 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.83 2
Klebsiella michiganensis M5al 0.25 BWI76_RS23085 adenosylcobinamide-phosphate synthase 0.27 BWI76_RS23000 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF3951 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.28 GFF3969 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 78
Rhodospirillum rubrum S1H 0.25 Rru_A3382 Cobalamin biosynthesis protein CbiB (NCBI) 0.25 Rru_A0667 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.24 TX73_003720 adenosylcobinamide-phosphate synthase CbiB 0.32 TX73_010790 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Fusobacterium nucleatum SB010 0.24 HUW76_05240 cobalamin biosynthesis protein CobD 0.27 HUW76_05630 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 35
Sinorhizobium meliloti 1021 0.24 SMc04279 cobalamin biosynthesis protein 0.28 SMc04214 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.23 MPMX19_01266 Cobalamin biosynthesis protein CbiB 0.32 MPMX19_00312 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.23 DVU2237 cbiB cobalamin biosynthesis protein CobD, putative (TIGR) 0.36 DVU3279 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (TIGR) 0.73 15
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF3996 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.34 GFF3999 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Rhizobium sp. OAE497 0.23 ABIE40_RS11095 adenosylcobinamide-phosphate synthase CbiB 0.29 ABIE40_RS10720 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.71 90
Dinoroseobacter shibae DFL-12 0.23 Dshi_0165 cobalamin biosynthesis protein CobD (RefSeq) 0.33 Dshi_0788 Nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS10235 cobalamin biosynthesis protein CobD 0.34 AZOBR_RS03460 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_0629 cobalamin biosynthesis protein CobD 0.34 Ga0059261_0625 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 68
Variovorax sp. SCN45 0.21 GFF439 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) 0.32 GFF425 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Magnetospirillum magneticum AMB-1 0.21 AMB_RS01490 cobalamin biosynthesis protein 0.28 AMB_RS02805 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Variovorax sp. OAS795 0.21 ABID97_RS17390 adenosylcobinamide-phosphate synthase CbiB 0.34 ABID97_RS17335 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Bosea sp. OAE506 0.20 ABIE41_RS01755 adenosylcobinamide-phosphate synthase CbiB 0.30 ABIE41_RS21245 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Shewanella amazonensis SB2B 0.18 Sama_0854 CobD-related protein (RefSeq) 0.35 Sama_0762 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) low > 62
Agrobacterium fabrum C58 0.17 Atu2809 cobalamin biosynthesis protein 0.27 Atu1890 cobyrinic acid synthase — —
Vibrio cholerae E7946 ATCC 55056 0.15 CSW01_12050 adenosylcobinamide-phosphate synthase 0.29 CSW01_06260 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 62
Shewanella sp. ANA-3 0.13 Shewana3_3053 cobalamin biosynthesis protein CbiB (RefSeq) 0.37 Shewana3_3278 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.13 SO1321 CobD-related protein (NCBI ptt file) 0.35 SO1035 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.12 Shew_1026 cobalamin biosynthesis protein CbiB (RefSeq) 0.33 Shew_0714 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) low > 60

Not shown: 4 genomes with orthologs for PS417_20050 only; 21 genomes with orthologs for PS417_20030 only