Conservation of cofitness between PS417_19695 and PS417_19880 in Pseudomonas simiae WCS417

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_19695 flagellar biosynthesis sigma factor 1.0 PS417_19880 flagellar basal body L-ring protein 0.97 5
Pseudomonas fluorescens SBW25 0.99 PFLU_RS21660 RNA polymerase sigma factor FliA 0.98 PFLU_RS21850 flagellar basal body L-ring protein FlgH 0.97 3
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS21660 RNA polymerase sigma factor FliA 0.98 PFLU_RS21850 flagellar basal body L-ring protein FlgH 0.98 1
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_3626 RNA polymerase sigma factor for flagellar operon 0.87 Pf1N1B4_3570 Flagellar L-ring protein FlgH low > 87
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_18785 flagellar biosynthesis sigma factor 0.89 AO353_18605 flagellar basal body L-ring protein 0.82 14
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_4331 RNA polymerase sigma factor for flagellar operon 0.91 PfGW456L13_4385 Flagellar L-ring protein FlgH 0.29 22
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_03730 flagellar biosynthesis sigma factor 0.88 AO356_03920 flagellar basal body L-ring protein 0.94 9
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2573 RNA polymerase sigma factor for flagellar operon 0.89 Pf6N2E2_2626 Flagellar L-ring protein FlgH 0.94 3
Pseudomonas sp. RS175 0.95 PFR28_00852 RNA polymerase sigma factor FliA 0.88 PFR28_00806 Flagellar L-ring protein 0.90 13
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.78 Psyr_3474 Flagellar L-ring protein 0.90 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.78 Psyr_3474 Flagellar L-ring protein 0.57 29
Pseudomonas putida KT2440 0.91 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.88 PP_4384 Flagellar L-ring protein 0.93 2
Pseudomonas sp. S08-1 0.84 OH686_02730 RNA polymerase sigma factor for flagellar operon 0.70 OH686_02945 Flagellar L-ring protein FlgH 0.92 5
Pseudomonas stutzeri RCH2 0.82 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family 0.77 Psest_2962 Flagellar basal body L-ring protein 0.90 12
Marinobacter adhaerens HP15 0.58 HP15_2302 flagellar biosynthesis sigma factor FliA 0.39 HP15_1473 flagellar basal body L-ring protein 0.84 17
Alteromonas macleodii MIT1002 0.56 MIT1002_01103 Sigma-F factor 0.42 MIT1002_01047 Basal body L-ring protein low > 70
Shewanella amazonensis SB2B 0.54 Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) 0.44 Sama_2312 flgH flagellar basal body L-ring protein (RefSeq) 0.98 12
Shewanella loihica PV-4 0.52 Shew_1383 fliA flagellar biosynthesis sigma factor (RefSeq) 0.41 Shew_1351 flgH flagellar basal body L-ring protein (RefSeq)
Shewanella sp. ANA-3 0.52 Shewana3_1359 fliA flagellar biosynthesis sigma factor (RefSeq) 0.40 Shewana3_1327 flgH flagellar basal body L-ring protein (RefSeq) 0.62 59
Shewanella oneidensis MR-1 0.52 SO3210 fliA RNA polymerase sigma-27 factor (NCBI ptt file) 0.40 SO3243 flgH flagellar L-ring protein FlgH (NCBI ptt file) 0.79 16
Rhodanobacter denitrificans MT42 0.52 LRK55_RS13320 RNA polymerase sigma factor FliA 0.34 LRK55_RS13175 flagellar basal body L-ring protein FlgH 0.55 54
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_02830 fliA RNA polymerase sigma factor FliA 0.36 OKGIIK_02680 flgH flagellar basal body L-ring protein FlgH low > 52
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS13580 RNA polymerase sigma factor FliA 0.34 LRK54_RS13435 flagellar basal body L-ring protein FlgH 0.59 12
Lysobacter sp. OAE881 0.50 ABIE51_RS16865 RNA polymerase sigma factor FliA 0.30 ABIE51_RS16700 flagellar basal body L-ring protein FlgH 0.47 41
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS20265 RNA polymerase sigma factor FliA 0.43 ABZR86_RS20105 flagellar basal body L-ring protein FlgH low > 74
Dechlorosoma suillum PS 0.46 Dsui_1726 RNA polymerase sigma factor, FliA/WhiG family 0.28 Dsui_1738 flagellar basal body L-ring protein low > 51
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS28940 RNA polymerase sigma factor FliA 0.25 QEN71_RS28890 flagellar basal body L-ring protein FlgH 0.91 15
Paraburkholderia graminis OAS925 0.46 ABIE53_000108 RNA polymerase sigma factor for flagellar operon FliA 0.24 ABIE53_000095 flagellar L-ring protein precursor FlgH 0.98 10
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS18925 RNA polymerase sigma70 0.25 BPHYT_RS18865 flagellar L-ring protein FlgH 0.84 20
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_05756 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.27 H281DRAFT_05768 flagellar L-ring protein precursor FlgH 0.37 78
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS10160 flagellar biosynthesis sigma factor 0.22 HSERO_RS10210 flagellar L-ring protein FlgH 0.79 36
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.2832.1 RNA polymerase sigma factor for flagellar operon 0.36 Xcc-8004.2785.1 Flagellar L-ring protein FlgH low > 74
Dickeya dianthicola 67-19 0.43 HGI48_RS13350 RNA polymerase sigma factor FliA 0.26 HGI48_RS13495 flagellar basal body L-ring protein FlgH 0.88 1
Dickeya dianthicola ME23 0.43 DZA65_RS13835 RNA polymerase sigma factor FliA 0.26 DZA65_RS13980 flagellar basal body L-ring protein FlgH 0.98 12
Erwinia tracheiphila SCR3 0.43 LU632_RS13785 RNA polymerase sigma factor FliA 0.27 LU632_RS10425 flgH flagellar basal body L-ring protein FlgH low > 74
Dickeya dadantii 3937 0.43 DDA3937_RS13300 RNA polymerase sigma factor FliA 0.26 DDA3937_RS13450 flagellar basal body L-ring protein FlgH 0.98 8
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS17485 RNA polymerase sigma factor FliA 0.29 RALBFv3_RS21710 flagellar L-ring protein FlgH low > 76
Ralstonia solanacearum UW163 0.42 UW163_RS21665 RNA polymerase sigma factor FliA 0.29 UW163_RS17475 flagellar L-ring protein FlgH
Ralstonia solanacearum GMI1000 0.42 RS_RS23830 RNA polymerase sigma factor FliA 0.29 RS_RS18825 flagellar L-ring protein FlgH low > 80
Ralstonia solanacearum PSI07 0.42 RPSI07_RS06165 RNA polymerase sigma factor FliA 0.28 RPSI07_RS01420 flagellar L-ring protein FlgH low > 81
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_01807 RNA polymerase sigma factor FliA 0.25 OHPLBJKB_02586 Flagellar L-ring protein low > 73
Pantoea sp. MT58 0.42 IAI47_08160 RNA polymerase sigma factor FliA 0.24 IAI47_12135 flagellar basal body L-ring protein FlgH 0.87 4
Escherichia coli BW25113 0.42 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) 0.25 b1079 flgH flagellar L-ring protein precursor H (NCBI) 0.43 16
Escherichia coli Nissle 1917 0.42 ECOLIN_RS10975 RNA polymerase sigma factor FliA 0.25 ECOLIN_RS06245 flagellar basal body L-ring protein FlgH
Escherichia coli ECRC98 0.42 JDDGAC_00370 fliA RNA polymerase sigma factor FliA 0.25 JDDGAC_07305 flgH flagellar basal body L-ring protein FlgH
Escherichia coli ECRC62 0.42 BNILDI_15190 fliA RNA polymerase sigma factor FliA 0.25 BNILDI_19335 flgH flagellar basal body L-ring protein FlgH
Escherichia coli ECRC101 0.42 MCAODC_19610 fliA RNA polymerase sigma factor FliA 0.25 MCAODC_23005 flgH flagellar basal body L-ring protein FlgH
Escherichia coli ECOR27 0.42 NOLOHH_16400 fliA RNA polymerase sigma factor FliA 0.25 NOLOHH_21175 flgH flagellar basal body L-ring protein FlgH
Escherichia coli ECRC99 0.42 KEDOAH_02310 fliA RNA polymerase sigma factor FliA 0.25 KEDOAH_24110 flgH flagellar basal body L-ring protein FlgH
Escherichia coli ECRC102 0.42 NIAGMN_02270 fliA RNA polymerase sigma factor FliA 0.25 NIAGMN_24185 flgH flagellar basal body L-ring protein FlgH
Escherichia coli ECRC101 0.42 OKFHMN_25780 fliA RNA polymerase sigma factor FliA 0.25 OKFHMN_03645 flgH flagellar basal body L-ring protein FlgH
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS18040 RNA polymerase sigma factor FliA 0.28 ABZR87_RS22260 flagellar basal body L-ring protein FlgH 0.93 21
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor 0.28 RR42_RS35695 flagellar L-ring protein FlgH low > 128
Serratia liquefaciens MT49 0.42 IAI46_15785 RNA polymerase sigma factor FliA 0.24 IAI46_15930 flagellar basal body L-ring protein FlgH low > 86
Rahnella sp. WP5 0.42 EX31_RS09450 RNA polymerase sigma factor FliA 0.23 EX31_RS11285 flagellar basal body L-ring protein FlgH 0.80 6
Escherichia fergusonii Becca 0.42 EFB2_02023 RNA polymerase sigma factor FliA 0.25 EFB2_02895 Flagellar L-ring protein low > 86
Acidovorax sp. GW101-3H11 0.41 Ac3H11_1381 RNA polymerase sigma factor for flagellar operon 0.22 Ac3H11_1371 Flagellar L-ring protein FlgH
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF1690 RNA polymerase sigma factor for flagellar operon 0.25 GFF3360 Flagellar L-ring protein FlgH 0.82 11
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0625 RNA polymerase sigma factor, FliA/WhiG family 0.26 EX28DRAFT_1853 Flagellar basal body L-ring protein low > 76
Pectobacterium carotovorum WPP14 0.41 HER17_RS08355 RNA polymerase sigma factor FliA 0.25 HER17_RS08195 flagellar basal body L-ring protein FlgH 0.88 20
Enterobacter sp. TBS_079 0.41 MPMX20_02847 RNA polymerase sigma factor FliA 0.26 MPMX20_01758 Flagellar L-ring protein 0.86 18
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF1428 RNA polymerase sigma factor for flagellar operon 0.33 GFF4078 Flagellar L-ring protein FlgH
Variovorax sp. SCN45 0.39 GFF5774 RNA polymerase sigma factor for flagellar operon 0.28 GFF5721 Flagellar L-ring protein FlgH low > 127
Castellaniella sp019104865 MT123 0.36 ABCV34_RS05605 RNA polymerase sigma factor FliA 0.25 ABCV34_RS05740 flagellar basal body L-ring protein FlgH 0.79 4
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_2011 RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq) 0.27 DvMF_2520 flgH flagellar basal body L-ring protein (RefSeq) 0.79 29
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU3229 fliA RNA polymerase sigma factor for flagellar operon FliA (TIGR) 0.25 DVU0515 flgH flagellar L-ring protein FlgH (TIGR) 0.90 9
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_2081 RNA polymerase sigma factor, FliA/WhiG family 0.32 Ga0059261_2095 Flagellar basal body L-ring protein 0.74 18

Not shown: 2 genomes with orthologs for PS417_19695 only; 9 genomes with orthologs for PS417_19880 only