Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas simiae WCS417 | 1.0 | PS417_19695 | | flagellar biosynthesis sigma factor | 1.0 | PS417_19880 | | flagellar basal body L-ring protein | 0.97 | 5 |
Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.98 | PFLU_RS21850 | | flagellar basal body L-ring protein FlgH | 0.97 | 3 |
Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.98 | PFLU_RS21850 | | flagellar basal body L-ring protein FlgH | 0.98 | 1 |
Pseudomonas fluorescens FW300-N1B4 | 0.97 | Pf1N1B4_3626 | | RNA polymerase sigma factor for flagellar operon | 0.87 | Pf1N1B4_3570 | | Flagellar L-ring protein FlgH | low | > 87 |
Pseudomonas fluorescens FW300-N2E3 | 0.97 | AO353_18785 | | flagellar biosynthesis sigma factor | 0.89 | AO353_18605 | | flagellar basal body L-ring protein | 0.82 | 14 |
Pseudomonas fluorescens GW456-L13 | 0.97 | PfGW456L13_4331 | | RNA polymerase sigma factor for flagellar operon | 0.91 | PfGW456L13_4385 | | Flagellar L-ring protein FlgH | 0.29 | 22 |
Pseudomonas fluorescens FW300-N2C3 | 0.96 | AO356_03730 | | flagellar biosynthesis sigma factor | 0.88 | AO356_03920 | | flagellar basal body L-ring protein | 0.94 | 9 |
Pseudomonas fluorescens FW300-N2E2 | 0.96 | Pf6N2E2_2573 | | RNA polymerase sigma factor for flagellar operon | 0.89 | Pf6N2E2_2626 | | Flagellar L-ring protein FlgH | 0.94 | 3 |
Pseudomonas sp. RS175 | 0.95 | PFR28_00852 | | RNA polymerase sigma factor FliA | 0.88 | PFR28_00806 | | Flagellar L-ring protein | 0.90 | 13 |
Pseudomonas syringae pv. syringae B728a | 0.95 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.78 | Psyr_3474 | | Flagellar L-ring protein | 0.90 | 2 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.95 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.78 | Psyr_3474 | | Flagellar L-ring protein | 0.57 | 29 |
Pseudomonas putida KT2440 | 0.91 | PP_4341 | | RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons | 0.88 | PP_4384 | | Flagellar L-ring protein | 0.93 | 2 |
Pseudomonas sp. S08-1 | 0.84 | OH686_02730 | | RNA polymerase sigma factor for flagellar operon | 0.70 | OH686_02945 | | Flagellar L-ring protein FlgH | 0.92 | 5 |
Pseudomonas stutzeri RCH2 | 0.82 | Psest_1740 | | RNA polymerase sigma factor, FliA/WhiG family | 0.77 | Psest_2962 | | Flagellar basal body L-ring protein | 0.90 | 12 |
Marinobacter adhaerens HP15 | 0.58 | HP15_2302 | | flagellar biosynthesis sigma factor FliA | 0.39 | HP15_1473 | | flagellar basal body L-ring protein | 0.84 | 17 |
Alteromonas macleodii MIT1002 | 0.56 | MIT1002_01103 | | Sigma-F factor | 0.42 | MIT1002_01047 | | Basal body L-ring protein | low | > 70 |
Shewanella amazonensis SB2B | 0.54 | Sama_2280 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.44 | Sama_2312 | flgH | flagellar basal body L-ring protein (RefSeq) | 0.98 | 12 |
Shewanella loihica PV-4 | 0.52 | Shew_1383 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.41 | Shew_1351 | flgH | flagellar basal body L-ring protein (RefSeq) | — | — |
Shewanella sp. ANA-3 | 0.52 | Shewana3_1359 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.40 | Shewana3_1327 | flgH | flagellar basal body L-ring protein (RefSeq) | 0.62 | 59 |
Shewanella oneidensis MR-1 | 0.52 | SO3210 | fliA | RNA polymerase sigma-27 factor (NCBI ptt file) | 0.40 | SO3243 | flgH | flagellar L-ring protein FlgH (NCBI ptt file) | 0.79 | 16 |
Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS13320 | | RNA polymerase sigma factor FliA | 0.34 | LRK55_RS13175 | | flagellar basal body L-ring protein FlgH | 0.55 | 54 |
Rhodanobacter sp. FW510-T8 | 0.52 | OKGIIK_02830 | fliA | RNA polymerase sigma factor FliA | 0.36 | OKGIIK_02680 | flgH | flagellar basal body L-ring protein FlgH | low | > 52 |
Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS13580 | | RNA polymerase sigma factor FliA | 0.34 | LRK54_RS13435 | | flagellar basal body L-ring protein FlgH | 0.59 | 12 |
Lysobacter sp. OAE881 | 0.50 | ABIE51_RS16865 | | RNA polymerase sigma factor FliA | 0.30 | ABIE51_RS16700 | | flagellar basal body L-ring protein FlgH | 0.47 | 41 |
Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS20265 | | RNA polymerase sigma factor FliA | 0.43 | ABZR86_RS20105 | | flagellar basal body L-ring protein FlgH | low | > 74 |
Dechlorosoma suillum PS | 0.46 | Dsui_1726 | | RNA polymerase sigma factor, FliA/WhiG family | 0.28 | Dsui_1738 | | flagellar basal body L-ring protein | low | > 51 |
Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS28940 | | RNA polymerase sigma factor FliA | 0.25 | QEN71_RS28890 | | flagellar basal body L-ring protein FlgH | 0.91 | 15 |
Paraburkholderia graminis OAS925 | 0.46 | ABIE53_000108 | | RNA polymerase sigma factor for flagellar operon FliA | 0.24 | ABIE53_000095 | | flagellar L-ring protein precursor FlgH | 0.98 | 10 |
Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS18925 | | RNA polymerase sigma70 | 0.25 | BPHYT_RS18865 | | flagellar L-ring protein FlgH | 0.84 | 20 |
Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_05756 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.27 | H281DRAFT_05768 | | flagellar L-ring protein precursor FlgH | 0.37 | 78 |
Herbaspirillum seropedicae SmR1 | 0.44 | HSERO_RS10160 | | flagellar biosynthesis sigma factor | 0.22 | HSERO_RS10210 | | flagellar L-ring protein FlgH | 0.79 | 36 |
Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.2832.1 | | RNA polymerase sigma factor for flagellar operon | 0.36 | Xcc-8004.2785.1 | | Flagellar L-ring protein FlgH | low | > 74 |
Dickeya dianthicola 67-19 | 0.43 | HGI48_RS13350 | | RNA polymerase sigma factor FliA | 0.26 | HGI48_RS13495 | | flagellar basal body L-ring protein FlgH | 0.88 | 1 |
Dickeya dianthicola ME23 | 0.43 | DZA65_RS13835 | | RNA polymerase sigma factor FliA | 0.26 | DZA65_RS13980 | | flagellar basal body L-ring protein FlgH | 0.98 | 12 |
Erwinia tracheiphila SCR3 | 0.43 | LU632_RS13785 | | RNA polymerase sigma factor FliA | 0.27 | LU632_RS10425 | flgH | flagellar basal body L-ring protein FlgH | low | > 74 |
Dickeya dadantii 3937 | 0.43 | DDA3937_RS13300 | | RNA polymerase sigma factor FliA | 0.26 | DDA3937_RS13450 | | flagellar basal body L-ring protein FlgH | 0.98 | 8 |
Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS17485 | | RNA polymerase sigma factor FliA | 0.29 | RALBFv3_RS21710 | | flagellar L-ring protein FlgH | low | > 76 |
Ralstonia solanacearum UW163 | 0.42 | UW163_RS21665 | | RNA polymerase sigma factor FliA | 0.29 | UW163_RS17475 | | flagellar L-ring protein FlgH | — | — |
Ralstonia solanacearum GMI1000 | 0.42 | RS_RS23830 | | RNA polymerase sigma factor FliA | 0.29 | RS_RS18825 | | flagellar L-ring protein FlgH | low | > 80 |
Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS06165 | | RNA polymerase sigma factor FliA | 0.28 | RPSI07_RS01420 | | flagellar L-ring protein FlgH | low | > 81 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.42 | OHPLBJKB_01807 | | RNA polymerase sigma factor FliA | 0.25 | OHPLBJKB_02586 | | Flagellar L-ring protein | low | > 73 |
Pantoea sp. MT58 | 0.42 | IAI47_08160 | | RNA polymerase sigma factor FliA | 0.24 | IAI47_12135 | | flagellar basal body L-ring protein FlgH | 0.87 | 4 |
Escherichia coli BW25113 | 0.42 | b1922 | fliA | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | 0.25 | b1079 | flgH | flagellar L-ring protein precursor H (NCBI) | 0.43 | 16 |
Escherichia coli Nissle 1917 | 0.42 | ECOLIN_RS10975 | | RNA polymerase sigma factor FliA | 0.25 | ECOLIN_RS06245 | | flagellar basal body L-ring protein FlgH | — | — |
Escherichia coli ECRC98 | 0.42 | JDDGAC_00370 | fliA | RNA polymerase sigma factor FliA | 0.25 | JDDGAC_07305 | flgH | flagellar basal body L-ring protein FlgH | — | — |
Escherichia coli ECRC62 | 0.42 | BNILDI_15190 | fliA | RNA polymerase sigma factor FliA | 0.25 | BNILDI_19335 | flgH | flagellar basal body L-ring protein FlgH | — | — |
Escherichia coli ECRC101 | 0.42 | MCAODC_19610 | fliA | RNA polymerase sigma factor FliA | 0.25 | MCAODC_23005 | flgH | flagellar basal body L-ring protein FlgH | — | — |
Escherichia coli ECOR27 | 0.42 | NOLOHH_16400 | fliA | RNA polymerase sigma factor FliA | 0.25 | NOLOHH_21175 | flgH | flagellar basal body L-ring protein FlgH | — | — |
Escherichia coli ECRC99 | 0.42 | KEDOAH_02310 | fliA | RNA polymerase sigma factor FliA | 0.25 | KEDOAH_24110 | flgH | flagellar basal body L-ring protein FlgH | — | — |
Escherichia coli ECRC102 | 0.42 | NIAGMN_02270 | fliA | RNA polymerase sigma factor FliA | 0.25 | NIAGMN_24185 | flgH | flagellar basal body L-ring protein FlgH | — | — |
Escherichia coli ECRC101 | 0.42 | OKFHMN_25780 | fliA | RNA polymerase sigma factor FliA | 0.25 | OKFHMN_03645 | flgH | flagellar basal body L-ring protein FlgH | — | — |
Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS18040 | | RNA polymerase sigma factor FliA | 0.28 | ABZR87_RS22260 | | flagellar basal body L-ring protein FlgH | 0.93 | 21 |
Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS35750 | | DNA-directed RNA polymerase sigma-70 factor | 0.28 | RR42_RS35695 | | flagellar L-ring protein FlgH | low | > 128 |
Serratia liquefaciens MT49 | 0.42 | IAI46_15785 | | RNA polymerase sigma factor FliA | 0.24 | IAI46_15930 | | flagellar basal body L-ring protein FlgH | low | > 86 |
Rahnella sp. WP5 | 0.42 | EX31_RS09450 | | RNA polymerase sigma factor FliA | 0.23 | EX31_RS11285 | | flagellar basal body L-ring protein FlgH | 0.80 | 6 |
Escherichia fergusonii Becca | 0.42 | EFB2_02023 | | RNA polymerase sigma factor FliA | 0.25 | EFB2_02895 | | Flagellar L-ring protein | low | > 86 |
Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_1381 | | RNA polymerase sigma factor for flagellar operon | 0.22 | Ac3H11_1371 | | Flagellar L-ring protein FlgH | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF1690 | | RNA polymerase sigma factor for flagellar operon | 0.25 | GFF3360 | | Flagellar L-ring protein FlgH | 0.82 | 11 |
Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_0625 | | RNA polymerase sigma factor, FliA/WhiG family | 0.26 | EX28DRAFT_1853 | | Flagellar basal body L-ring protein | low | > 76 |
Pectobacterium carotovorum WPP14 | 0.41 | HER17_RS08355 | | RNA polymerase sigma factor FliA | 0.25 | HER17_RS08195 | | flagellar basal body L-ring protein FlgH | 0.88 | 20 |
Enterobacter sp. TBS_079 | 0.41 | MPMX20_02847 | | RNA polymerase sigma factor FliA | 0.26 | MPMX20_01758 | | Flagellar L-ring protein | 0.86 | 18 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF1428 | | RNA polymerase sigma factor for flagellar operon | 0.33 | GFF4078 | | Flagellar L-ring protein FlgH | — | — |
Variovorax sp. SCN45 | 0.39 | GFF5774 | | RNA polymerase sigma factor for flagellar operon | 0.28 | GFF5721 | | Flagellar L-ring protein FlgH | low | > 127 |
Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS05605 | | RNA polymerase sigma factor FliA | 0.25 | ABCV34_RS05740 | | flagellar basal body L-ring protein FlgH | 0.79 | 4 |
Desulfovibrio vulgaris Miyazaki F | 0.30 | DvMF_2011 | | RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq) | 0.27 | DvMF_2520 | flgH | flagellar basal body L-ring protein (RefSeq) | 0.79 | 29 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.30 | DVU3229 | fliA | RNA polymerase sigma factor for flagellar operon FliA (TIGR) | 0.25 | DVU0515 | flgH | flagellar L-ring protein FlgH (TIGR) | 0.90 | 9 |
Sphingomonas koreensis DSMZ 15582 | 0.25 | Ga0059261_2081 | | RNA polymerase sigma factor, FliA/WhiG family | 0.32 | Ga0059261_2095 | | Flagellar basal body L-ring protein | 0.74 | 18 |
Not shown: 2 genomes with orthologs for PS417_19695 only; 9 genomes with orthologs for PS417_19880 only