Conservation of cofitness between Psest_3766 and Psest_3720 in Pseudomonas stutzeri RCH2

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3766 Uncharacterized protein conserved in bacteria 1.0 Psest_3720 penicillin-binding protein, 1A family 0.41 3
Pseudomonas sp. S08-1 0.79 OH686_13790 Protein of unknown function DUF484 0.75 OH686_10055 Multimodular transpeptidase-transglycosylase low > 80
Pseudomonas putida KT2440 0.69 PP_5229 conserved protein of unknown function 0.72 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase low > 96
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS29275 DUF484 family protein 0.70 PFLU_RS02000 penicillin-binding protein 1A 0.38 26
Pseudomonas fluorescens SBW25 0.67 PFLU_RS29275 DUF484 family protein 0.70 PFLU_RS02000 penicillin-binding protein 1A low > 109
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_0184 Protein of unknown function DUF484 0.72 Psyr_0402 Peptidoglycan glycosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_0184 Protein of unknown function DUF484 0.72 Psyr_0402 Peptidoglycan glycosyltransferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_09045 hypothetical protein 0.72 AO353_12470 peptidase low > 101
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_12730 hypothetical protein 0.72 AO356_09420 peptidase low > 104
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_4417 Protein of unknown function DUF484 0.68 Pf6N2E2_3761 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 103
Pseudomonas simiae WCS417 0.64 PS417_27590 hypothetical protein 0.70 PS417_01955 peptidase 0.38 5
Pseudomonas sp. RS175 0.61 PFR28_04377 hypothetical protein 0.72 PFR28_05006 Penicillin-binding protein 1A low > 88
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_843 Protein of unknown function DUF484 0.68 PfGW456L13_282 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_2172 Protein of unknown function DUF484 0.72 Pf1N1B4_1544 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 87
Marinobacter adhaerens HP15 0.39 HP15_249 protein containing DUF484 0.49 HP15_473 penicillin-binding protein, 1A family — —
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS08540 DUF484 family protein 0.42 LRK54_RS11830 penicillin-binding protein 1A 0.31 15
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_15330 DUF484 domain-containing protein 0.42 OKGIIK_12065 Penicillin-binding protein 1A low > 52
Rhodanobacter denitrificans MT42 0.24 LRK55_RS08305 DUF484 family protein 0.42 LRK55_RS11555 penicillin-binding protein 1A low > 63
Dechlorosoma suillum PS 0.23 Dsui_0650 hypothetical protein 0.38 Dsui_1186 penicillin-binding protein, 1A family — —
Lysobacter sp. OAE881 0.22 ABIE51_RS03030 DUF484 family protein 0.38 ABIE51_RS17190 penicillin-binding protein 1A low > 62
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_0245 Uncharacterized protein conserved in bacteria 0.41 B158DRAFT_0757 penicillin-binding protein, 1A family — —
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS15020 DUF484 family protein 0.42 ABZR86_RS11815 penicillin-binding protein 1A low > 74
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.846.1 Protein of unknown function DUF484 0.36 Xcc-8004.1196.1 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 74
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_00645 DUF484 domain-containing protein 0.38 CSW01_13335 penicillin-binding protein 1A — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS23685 DUF484 domain-containing protein 0.34 RPSI07_RS10265 penicillin-binding protein 1A — —
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS05060 DUF484 family protein 0.35 ABZR87_RS02625 penicillin-binding protein 1A — —
Alteromonas macleodii MIT1002 0.19 MIT1002_00158 hypothetical protein 0.38 MIT1002_00454 Penicillin-binding protein 1A low > 70
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS00610 hypothetical protein 0.37 RR42_RS19040 penicillin-binding protein — —
Ralstonia solanacearum UW163 0.19 UW163_RS03900 DUF484 domain-containing protein 0.34 UW163_RS06645 penicillin-binding protein 1A — —
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS09680 DUF484 domain-containing protein 0.34 RALBFv3_RS06970 penicillin-binding protein 1A — —
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS21470 hypothetical protein 0.36 HSERO_RS20890 penicillin-binding protein 1A — —
Shewanella sp. ANA-3 0.18 Shewana3_0392 hypothetical protein (RefSeq) 0.41 Shewana3_3900 1A family penicillin-binding protein (RefSeq) — —
Ralstonia solanacearum GMI1000 0.18 RS_RS00265 DUF484 domain-containing protein 0.34 RS_RS14915 penicillin-binding protein 1A — —
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS00360 DUF484 family protein 0.36 QEN71_RS28065 penicillin-binding protein 1A low > 153
Shewanella amazonensis SB2B 0.18 Sama_3248 hypothetical protein (RefSeq) 0.40 Sama_3374 penicillin-binding protein 1A (RefSeq) low > 62
Shewanella oneidensis MR-1 0.18 SO4307 conserved hypothetical protein (NCBI ptt file) 0.41 SO0280 mrcA penicillin-binding protein 1A (NCBI ptt file) — —
Shewanella loihica PV-4 0.17 Shew_0324 hypothetical protein (RefSeq) 0.39 Shew_0207 1A family penicillin-binding protein (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.16 AMB_RS21495 DUF484 domain-containing protein 0.33 AMB_RS16340 penicillin-binding protein 1A low > 64
Pantoea sp. MT58 0.16 IAI47_18405 DUF484 domain-containing protein 0.38 IAI47_01860 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 76
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS01660 hypothetical protein 0.36 BPHYT_RS17915 penicillin-binding protein 1A — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF238 Protein of unknown function DUF484 0.39 GFF623 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 78
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_02201 hypothetical protein 0.36 H281DRAFT_05609 penicillin-binding protein 1A low > 103
Castellaniella sp019104865 MT123 0.15 ABCV34_RS13460 DUF484 family protein 0.32 ABCV34_RS12695 PBP1A family penicillin-binding protein — —
Paraburkholderia graminis OAS925 0.15 ABIE53_000427 uncharacterized protein YigA (DUF484 family) 0.36 ABIE53_003746 penicillin-binding protein 1A low > 113
Rahnella sp. WP5 0.15 EX31_RS15160 DUF484 domain-containing protein 0.39 EX31_RS04750 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 89
Acidovorax sp. GW101-3H11 0.15 Ac3H11_1994 Protein of unknown function DUF484 0.34 Ac3H11_4700 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —
Dickeya dadantii 3937 0.15 DDA3937_RS19895 DUF484 domain-containing protein 0.37 DDA3937_RS19580 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 74
Dickeya dianthicola ME23 0.15 DZA65_RS21095 DUF484 domain-containing protein 0.37 DZA65_RS20795 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Variovorax sp. OAS795 0.15 ABID97_RS06140 DUF484 family protein 0.33 ABID97_RS02790 penicillin-binding protein 1A low > 91
Serratia liquefaciens MT49 0.15 IAI46_00720 DUF484 domain-containing protein 0.38 IAI46_23740 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 86
Dickeya dianthicola 67-19 0.14 HGI48_RS20050 DUF484 domain-containing protein 0.37 HGI48_RS19710 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 71
Variovorax sp. SCN45 0.14 GFF4492 Protein of unknown function DUF484 0.34 GFF3310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 127
Enterobacter sp. TBS_079 0.14 MPMX20_04466 hypothetical protein 0.38 MPMX20_04284 Penicillin-binding protein 1A low > 85
Erwinia tracheiphila SCR3 0.14 LU632_RS24140 DUF484 domain-containing protein 0.37 LU632_RS22900 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Pectobacterium carotovorum WPP14 0.14 HER17_RS01345 DUF484 domain-containing protein 0.38 HER17_RS01745 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Enterobacter asburiae PDN3 0.13 EX28DRAFT_4479 Uncharacterized protein conserved in bacteria 0.38 EX28DRAFT_4146 penicillin-binding protein, 1A family low > 76
Azospirillum brasilense Sp245 0.13 AZOBR_RS03970 hypothetical protein 0.32 AZOBR_RS11840 penicillin-binding protein 1A — —
Klebsiella michiganensis M5al 0.13 BWI76_RS01205 DUF484 family protein 0.38 BWI76_RS26125 carboxypeptidase/penicillin-binding protein 1A low > 92
Escherichia coli Nissle 1917 0.13 ECOLIN_RS21870 DUF484 domain-containing protein 0.38 ECOLIN_RS19395 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA 0.65 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.12 GFF546 Protein of unknown function DUF484 0.34 GFF1338 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.46 77
Azospirillum sp. SherDot2 0.12 MPMX19_02109 hypothetical protein 0.31 MPMX19_00340 Penicillin-binding protein 1A — —

Not shown: 0 genomes with orthologs for Psest_3766 only; 36 genomes with orthologs for Psest_3720 only