| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0138 | | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain | 1.0 | Psest_3720 | | penicillin-binding protein, 1A family | 0.36 | 14 |
| Pseudomonas sp. S08-1 | 0.80 | OH686_14500 | | ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) | 0.75 | OH686_10055 | | Multimodular transpeptidase-transglycosylase | low | > 80 |
| Pseudomonas putida KT2440 | 0.74 | PP_0282 | | L-arginine ABC transporter - periplasmic binding subunit | 0.72 | PP_5084 | | penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase | 0.31 | 6 |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_09900 | | ABC transporter for L-Lysine, periplasmic substrate-binding component (from data) | 0.72 | AO356_09420 | | peptidase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.73 | Pf6N2E2_3856 | | Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) | 0.68 | Pf6N2E2_3761 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | low | > 103 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_04914 | | ABC transporter arginine-binding protein 1 | 0.72 | PFR28_05006 | | Penicillin-binding protein 1A | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.73 | AO353_11995 | | amino acid ABC transporter | 0.72 | AO353_12470 | | peptidase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_1641 | | Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) | 0.72 | Pf1N1B4_1544 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | 0.50 | 17 |
| Pseudomonas fluorescens GW456-L13 | 0.70 | PfGW456L13_377 | | Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) | 0.68 | PfGW456L13_282 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.70 | Psyr_4912 | | amino acid ABC transporter substrate-binding protein, PAAT family | 0.72 | Psyr_0402 | | Peptidoglycan glycosyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.70 | Psyr_4912 | | amino acid ABC transporter substrate-binding protein, PAAT family | 0.72 | Psyr_0402 | | Peptidoglycan glycosyltransferase | low | > 86 |
| Pseudomonas simiae WCS417 | 0.68 | PS417_01495 | | amino acid ABC transporter | 0.70 | PS417_01955 | | peptidase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.68 | PFLU_RS01535 | | ABC transporter substrate-binding protein | 0.70 | PFLU_RS02000 | | penicillin-binding protein 1A | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.68 | PFLU_RS01535 | | ABC transporter substrate-binding protein | 0.70 | PFLU_RS02000 | | penicillin-binding protein 1A | low | > 109 |
| Rhodospirillum rubrum S1H | 0.54 | Rru_A2251 | | extracellular solute-binding protein, family 3 (NCBI) | 0.32 | Rru_A2147 | | Penicillin-binding protein 1A (NCBI) | — | — |
| Sinorhizobium meliloti 1021 | 0.45 | SMc00140 | | L-lysine ABC transporter, substrate-binding component (from data) | 0.28 | SMc01334 | | penicillin-binding 1A transmembrane protein | — | — |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS21185 | | lysine/arginine/ornithine ABC transporter substrate-binding protein | 0.29 | ABIE40_RS07555 | | penicillin-binding protein 1A | — | — |
| Agrobacterium fabrum C58 | 0.41 | Atu1879 | | ABC transporter, substrate binding protein (amino acid) | 0.28 | Atu1341 | | penicillin-binding protein 1a | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.38 | QEN71_RS11350 | | ABC transporter substrate-binding protein | 0.36 | QEN71_RS28065 | | penicillin-binding protein 1A | low | > 153 |
| Vibrio cholerae E7946 ATCC 55056 | 0.37 | CSW01_09330 | | ABC transporter substrate-binding protein | 0.38 | CSW01_13335 | | penicillin-binding protein 1A | — | — |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_02976 | | Octopine-binding periplasmic protein | 0.31 | MPMX19_00340 | | Penicillin-binding protein 1A | — | — |
| Serratia liquefaciens MT49 | 0.35 | IAI46_12270 | | ABC transporter substrate-binding protein | 0.38 | IAI46_23740 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.35 | GFF768 | | Arginine ABC transporter, periplasmic arginine-binding protein ArtJ | 0.39 | GFF623 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | low | > 78 |
| Klebsiella michiganensis M5al | 0.35 | BWI76_RS19240 | | ABC transporter substrate-binding protein | 0.38 | BWI76_RS26125 | | carboxypeptidase/penicillin-binding protein 1A | low | > 92 |
| Rahnella sp. WP5 | 0.35 | EX31_RS18655 | | arginine ABC transporter substrate-binding protein | 0.39 | EX31_RS04750 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 89 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.34 | OHPLBJKB_02808 | | ABC transporter arginine-binding protein 1 | 0.38 | OHPLBJKB_00307 | | Penicillin-binding protein 1A | low | > 73 |
| Bosea sp. OAE506 | 0.34 | ABIE41_RS21180 | | transporter substrate-binding domain-containing protein | 0.27 | ABIE41_RS16150 | | penicillin-binding protein 1A | low | > 77 |
| Escherichia coli ECOR27 | 0.34 | NOLOHH_22300 | artJ | ABC transporter substrate-binding protein ArtJ | 0.38 | NOLOHH_08870 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 57 |
| Escherichia coli ECOR38 | 0.34 | HEPCGN_02100 | artJ | ABC transporter substrate-binding protein ArtJ | 0.38 | HEPCGN_15900 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 85 |
| Escherichia coli Nissle 1917 | 0.34 | ECOLIN_RS04580 | | arginine ABC transporter substrate-binding protein ArtJ | 0.38 | ECOLIN_RS19395 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 52 |
| Escherichia coli BL21 | 0.34 | ECD_00865 | | arginine ABC transporter periplasmic binding protein | 0.38 | ECD_03248 | | penicillin-binding protein 1a, murein transglycosylase and transpeptidase | low | > 60 |
| Escherichia coli ECRC62 | 0.34 | BNILDI_20555 | artJ | ABC transporter substrate-binding protein ArtJ | 0.38 | BNILDI_02650 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia fergusonii Becca | 0.34 | EFB2_03201 | | ABC transporter arginine-binding protein 1 | 0.38 | EFB2_00432 | | Penicillin-binding protein 1A | low | > 86 |
| Escherichia coli ECRC101 | 0.34 | OKFHMN_05915 | artJ | ABC transporter substrate-binding protein ArtJ | 0.37 | OKFHMN_17080 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli ECRC98 | 0.34 | JDDGAC_09550 | artJ | ABC transporter substrate-binding protein ArtJ | 0.37 | JDDGAC_20710 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli BW25113 | 0.34 | b0860 | artJ | arginine transporter subunit (NCBI) | 0.37 | b3396 | mrcA | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | low | > 76 |
| Escherichia coli ECRC101 | 0.34 | MCAODC_25130 | artJ | ABC transporter substrate-binding protein ArtJ | 0.37 | MCAODC_07610 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli ECRC99 | 0.34 | KEDOAH_21995 | artJ | ABC transporter substrate-binding protein ArtJ | 0.37 | KEDOAH_11060 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Escherichia coli ECRC102 | 0.34 | NIAGMN_03960 | artJ | ABC transporter substrate-binding protein ArtJ | 0.37 | NIAGMN_14850 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Phaeobacter inhibens DSM 17395 | 0.34 | PGA1_262p02360 | | putative histidine-binding periplasmic protein | 0.26 | PGA1_c20280 | | penicillin-binding protein 1A MrcA | low | > 62 |
| Enterobacter sp. TBS_079 | 0.34 | MPMX20_01503 | | ABC transporter arginine-binding protein 1 | 0.38 | MPMX20_04284 | | Penicillin-binding protein 1A | low | > 85 |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_001879 | | lysine/arginine/ornithine transport system substrate-binding protein | 0.36 | ABIE53_003746 | | penicillin-binding protein 1A | low | > 113 |
| Pantoea sp. MT58 | 0.33 | IAI47_13015 | | arginine ABC transporter substrate-binding protein | 0.38 | IAI47_01860 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 76 |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS27130 | | polyamine ABC transporter substrate-binding protein | 0.32 | AZOBR_RS11840 | | penicillin-binding protein 1A | — | — |
| Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS12470 | | arginine ABC transporter substrate-binding protein | 0.38 | HER17_RS01745 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 75 |
| Dickeya dadantii 3937 | 0.33 | DDA3937_RS09510 | | arginine ABC transporter substrate-binding protein | 0.37 | DDA3937_RS19580 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 74 |
| Enterobacter asburiae PDN3 | 0.33 | EX28DRAFT_2091 | | lysine-arginine-ornithine-binding periplasmic protein | 0.38 | EX28DRAFT_4146 | | penicillin-binding protein, 1A family | low | > 76 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.32 | H281DRAFT_00224 | | amino acid ABC transporter substrate-binding protein, PAAT family | 0.36 | H281DRAFT_05609 | | penicillin-binding protein 1A | low | > 103 |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS09840 | | arginine ABC transporter substrate-binding protein | 0.37 | DZA65_RS20795 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 75 |
| Burkholderia phytofirmans PsJN | 0.32 | BPHYT_RS29525 | | ABC transporter substrate-binding protein | 0.36 | BPHYT_RS17915 | | penicillin-binding protein 1A | — | — |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS09525 | | arginine ABC transporter substrate-binding protein | 0.37 | HGI48_RS19710 | | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | low | > 71 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.31 | GFF4691 | | Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein | 0.34 | GFF1338 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | low | > 90 |
| Erwinia tracheiphila SCR3 | 0.30 | LU632_RS09680 | artJ | arginine ABC transporter substrate-binding protein | 0.37 | LU632_RS22900 | mrcA | peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA | — | — |
| Marinobacter adhaerens HP15 | 0.30 | HP15_3031 | | L-arginine ABC transporter, periplasmic substrate-binding component ArtJ/HisJ/ArtI/AotJ/ArgT (from data) | 0.49 | HP15_473 | | penicillin-binding protein, 1A family | — | — |
| Castellaniella sp019104865 MT123 | 0.29 | ABCV34_RS03455 | | transporter substrate-binding domain-containing protein | 0.32 | ABCV34_RS12695 | | PBP1A family penicillin-binding protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS10775 | | cysteine ABC transporter substrate-binding protein | 0.36 | HSERO_RS20890 | | penicillin-binding protein 1A | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.26 | RALBFv3_RS21335 | | amino acid ABC transporter substrate-binding protein | 0.34 | RALBFv3_RS06970 | | penicillin-binding protein 1A | — | — |
| Ralstonia solanacearum UW163 | 0.26 | UW163_RS22480 | | amino acid ABC transporter substrate-binding protein | 0.34 | UW163_RS06645 | | penicillin-binding protein 1A | — | — |
| Ralstonia solanacearum PSI07 | 0.25 | RPSI07_RS01835 | | amino acid ABC transporter substrate-binding protein | 0.34 | RPSI07_RS10265 | | penicillin-binding protein 1A | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.24 | DvMF_0860 | | extracellular solute-binding protein family 3 (RefSeq) | 0.27 | DvMF_2630 | | penicillin-binding protein, 1A family (RefSeq) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.24 | Dshi_2222 | | extracellular solute-binding protein family 3 (RefSeq) | 0.27 | Dshi_1171 | | penicillin-binding protein, 1A family (RefSeq) | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.24 | CCNA_01508 | | cystine-binding protein | 0.27 | CCNA_01951 | | multimodular transpeptidase-transglycosylase PbpY | low | > 67 |
| Caulobacter crescentus NA1000 | 0.24 | CCNA_01508 | | cystine-binding protein | 0.27 | CCNA_01951 | | multimodular transpeptidase-transglycosylase PbpY | low | > 66 |
| Ralstonia solanacearum GMI1000 | 0.23 | RS_RS19470 | | amino acid ABC transporter substrate-binding protein | 0.34 | RS_RS14915 | | penicillin-binding protein 1A | — | — |
| Variovorax sp. SCN45 | 0.23 | GFF6211 | | ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) | 0.34 | GFF3310 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS04395 | | cysteine ABC transporter substrate-binding protein | 0.37 | RR42_RS19040 | | penicillin-binding protein | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.23 | DVU0386 | glnH | amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) | 0.28 | DVU0633 | | penicillin-binding protein (TIGR) | — | — |
| Acidovorax sp. GW101-3H11 | 0.21 | Ac3H11_3325 | | Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) | 0.34 | Ac3H11_4700 | | Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) | — | — |
| Ralstonia sp. UNC404CL21Col | 0.20 | ABZR87_RS00675 | | glutamine ABC transporter substrate-binding protein | 0.35 | ABZR87_RS02625 | | penicillin-binding protein 1A | — | — |
| Shewanella loihica PV-4 | 0.17 | Shew_3166 | | extracellular solute-binding protein (RefSeq) | 0.39 | Shew_0207 | | 1A family penicillin-binding protein (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.15 | SO1044 | | amino acid ABC transporter, periplasmic amino acid-binding protein (NCBI ptt file) | 0.41 | SO0280 | mrcA | penicillin-binding protein 1A (NCBI ptt file) | — | — |
| Variovorax sp. OAS795 | 0.15 | ABID97_RS20045 | | transporter substrate-binding domain-containing protein | 0.33 | ABID97_RS02790 | | penicillin-binding protein 1A | — | — |
| Shewanella sp. ANA-3 | 0.15 | Shewana3_0882 | | extracellular solute-binding protein (RefSeq) | 0.41 | Shewana3_3900 | | 1A family penicillin-binding protein (RefSeq) | — | — |
Not shown: 3 genomes with orthologs for Psest_0138 only; 24 genomes with orthologs for Psest_3720 only