| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_22175 | | amino acid transporter LysE | 1.0 | PS417_16480 | | recombination factor protein RarA | 0.22 | 3 |
| Pseudomonas fluorescens SBW25 | 0.97 | PFLU_RS23800 | | amino acid transporter | 0.98 | PFLU_RS18520 | | replication-associated recombination protein A | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.97 | PFLU_RS23800 | | amino acid transporter | 0.98 | PFLU_RS18520 | | replication-associated recombination protein A | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_710 | | Transporter, LysE family | 0.94 | Pf1N1B4_4062 | | FIG065221: Holliday junction DNA helicase | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.89 | PfGW456L13_1780 | | Transporter, LysE family | 0.93 | PfGW456L13_2653 | | FIG065221: Holliday junction DNA helicase | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.89 | AO353_03925 | | lysine transporter LysE | 0.94 | AO353_27640 | | recombination factor protein RarA | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.88 | AO356_05000 | | lysine transporter LysE | 0.93 | AO356_22185 | | recombination factor protein RarA | low | > 104 |
| Pseudomonas sp. RS175 | 0.87 | PFR28_00607 | | Arginine exporter protein ArgO | 0.93 | PFR28_02606 | | Replication-associated recombination protein A | low | > 88 |
| Pseudomonas putida KT2440 | 0.86 | PP_0916 | | Amino acid transporter LysE | 0.91 | PP_4002 | | DNA-dependent ATPase required for recombination | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.83 | Pf6N2E2_2850 | | Transporter, LysE family | 0.93 | Pf6N2E2_299 | | FIG065221: Holliday junction DNA helicase | low | > 103 |
| Pseudomonas syringae pv. syringae B728a | 0.82 | Psyr_4058 | | Lysine exporter protein (LYSE/YGGA) | 0.90 | Psyr_3177 | | Recombination protein MgsA | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.82 | Psyr_4058 | | Lysine exporter protein (LYSE/YGGA) | 0.90 | Psyr_3177 | | Recombination protein MgsA | low | > 86 |
| Pseudomonas sp. S08-1 | 0.71 | OH686_07205 | | Arginine exporter protein ArgO | 0.87 | OH686_00270 | | Replication-associated recombination protein RarA | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.70 | Psest_1165 | | Lysine efflux permease | 0.86 | Psest_2034 | | ATPase related to the helicase subunit of the Holliday junction resolvase | low | > 67 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.48 | DVU0593 | LysE | L-lysine exporter, putative (TIGR) | 0.31 | DVU1686 | | ATPase, AAA family (TIGR) | low | > 55 |
| Marinobacter adhaerens HP15 | 0.46 | HP15_869 | | lysine exporter protein (LYSE/YGGA) | 0.62 | HP15_1817 | | recombination factor protein RarA | low | > 73 |
| Shewanella amazonensis SB2B | 0.45 | Sama_2988 | | L-lysine exporter, putative (RefSeq) | 0.57 | Sama_1774 | | recombination factor protein RarA (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.45 | Shew_1845 | | lysine exporter protein LysE/YggA (RefSeq) | 0.58 | Shew_2022 | | recombination factor protein RarA (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_1653 | | lysine exporter protein LysE/YggA (RefSeq) | 0.58 | Shewana3_2052 | | recombination factor protein RarA (RefSeq) | low | > 73 |
| Rhodospirillum rubrum S1H | 0.44 | Rru_A0657 | | Lysine exporter protein (LYSE/YGGA) (NCBI) | 0.45 | Rru_A2660 | | AAA ATPase, central region (NCBI) | low | > 58 |
| Shewanella oneidensis MR-1 | 0.44 | SO2865 | | L-lysine exporter, putative (NCBI ptt file) | 0.57 | SO2308 | | ATPase, AAA family (NCBI ptt file) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.43 | MPMX20_03775 | | Arginine exporter protein ArgO | 0.57 | MPMX20_01554 | | Replication-associated recombination protein A | low | > 85 |
| Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_2969 | | L-lysine exporter | 0.58 | EX28DRAFT_2040 | | ATPase related to the helicase subunit of the Holliday junction resolvase | low | > 76 |
| Cupriavidus basilensis FW507-4G11 | 0.43 | RR42_RS31460 | | amino acid transporter | 0.58 | RR42_RS04355 | | recombination factor protein RarA | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS14020 | | LysE/ArgO family amino acid transporter | 0.57 | ABZR87_RS16030 | | replication-associated recombination protein A | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS18365 | | amino acid transporter | 0.56 | RALBFv3_RS04145 | | replication-associated recombination protein A | low | > 76 |
| Ralstonia solanacearum UW163 | 0.42 | UW163_RS20765 | | amino acid transporter | 0.56 | UW163_RS09525 | | replication-associated recombination protein A | — | — |
| Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS03905 | | amino acid transporter | 0.57 | RPSI07_RS13205 | | replication-associated recombination protein A | low | > 81 |
| Escherichia coli Nissle 1917 | 0.42 | ECOLIN_RS16245 | | arginine exporter ArgO | 0.58 | ECOLIN_RS04745 | | replication-associated recombination protein RarA | — | — |
| Escherichia fergusonii Becca | 0.42 | EFB2_00983 | | Arginine exporter protein ArgO | 0.58 | EFB2_03169 | | Replication-associated recombination protein A | low | > 86 |
| Escherichia coli ECOR38 | 0.42 | HEPCGN_18715 | argO | arginine exporter ArgO | 0.58 | HEPCGN_22950 | rarA | replication-associated recombination protein RarA | low | > 85 |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_11320 | argO | arginine exporter ArgO | 0.57 | NOLOHH_22130 | rarA | replication-associated recombination protein RarA | low | > 57 |
| Rahnella sp. WP5 | 0.41 | EX31_RS21440 | | arginine exporter ArgO | 0.59 | EX31_RS18515 | | replication-associated recombination protein A | low | > 89 |
| Agrobacterium fabrum C58 | 0.41 | Atu0927 | | LysE family transporter | 0.47 | Atu1914 | | ATPase, AAA family protein | low | > 89 |
| Escherichia coli ECRC102 | 0.41 | NIAGMN_17175 | argO | arginine exporter ArgO | 0.58 | NIAGMN_03280 | rarA | replication-associated recombination protein RarA | — | — |
| Escherichia coli ECRC101 | 0.41 | OKFHMN_19410 | argO | arginine exporter ArgO | 0.58 | OKFHMN_05560 | rarA | replication-associated recombination protein RarA | — | — |
| Escherichia coli ECRC101 | 0.41 | MCAODC_09930 | argO | arginine exporter ArgO | 0.58 | MCAODC_24950 | rarA | replication-associated recombination protein RarA | — | — |
| Escherichia coli ECRC98 | 0.41 | JDDGAC_23040 | argO | arginine exporter ArgO | 0.58 | JDDGAC_09370 | rarA | replication-associated recombination protein RarA | — | — |
| Escherichia coli ECRC99 | 0.41 | KEDOAH_08730 | argO | arginine exporter ArgO | 0.58 | KEDOAH_22175 | rarA | replication-associated recombination protein RarA | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF5066 | | Arginine exporter protein ArgO | 0.45 | GFF777 | | FIG065221: Holliday junction DNA helicase | low | > 90 |
| Rhizobium sp. OAE497 | 0.41 | ABIE40_RS06180 | | LysE/ArgO family amino acid transporter | 0.46 | ABIE40_RS08045 | | replication-associated recombination protein A | low | > 107 |
| Pantoea sp. MT58 | 0.40 | IAI47_03705 | | arginine exporter ArgO | 0.57 | IAI47_12900 | | replication-associated recombination protein A | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_00290 | | Arginine exporter protein ArgO | 0.40 | MPMX26_02987 | | Replication-associated recombination protein A | low | > 36 |
| Variovorax sp. OAS795 | 0.40 | ABID97_RS23870 | | LysE/ArgO family amino acid transporter | 0.53 | ABID97_RS07835 | | replication-associated recombination protein A | low | > 91 |
| Desulfovibrio vulgaris Miyazaki F | 0.40 | DvMF_2124 | | Lysine exporter protein (LYSE/YGGA) (RefSeq) | 0.31 | DvMF_0339 | | recombination factor protein RarA (RefSeq) | low | > 51 |
| Phaeobacter inhibens DSM 17395 | 0.39 | PGA1_c21730 | | putative arginine exporter protein | 0.48 | PGA1_c01930 | | replication-associated recombination protein A | low | > 62 |
| Ralstonia solanacearum GMI1000 | 0.39 | RS_RS10170 | | amino acid transporter | 0.55 | RS_RS11735 | | replication-associated recombination protein A | low | > 80 |
| Mycobacterium tuberculosis H37Rv | 0.39 | Rv1986 | | Probable conserved integral membrane protein | 0.34 | Rv2559c | | Conserved hypothetical alanine leucine valine rich protein | low | > 58 |
| Serratia liquefaciens MT49 | 0.39 | IAI46_20920 | | arginine exporter ArgO | 0.58 | IAI46_08570 | | replication-associated recombination protein A | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF3018 | | Arginine exporter protein ArgO | 0.58 | GFF4896 | | FIG065221: Holliday junction DNA helicase | low | > 78 |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS23965 | | arginine exporter protein | 0.59 | BWI76_RS09670 | | recombination factor protein RarA | low | > 92 |
| Variovorax sp. SCN45 | 0.38 | GFF2319 | | Arginine exporter protein ArgO | 0.53 | GFF6034 | | Replication-associated recombination protein RarA | low | > 127 |
| Dickeya dianthicola 67-19 | 0.38 | HGI48_RS02085 | | amino acid transporter | 0.57 | HGI48_RS09620 | | replication-associated recombination protein A | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.38 | HER17_RS02705 | | arginine exporter ArgO | 0.56 | HER17_RS12345 | | replication-associated recombination protein A | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.38 | OHPLBJKB_00793 | | Arginine exporter protein ArgO | 0.58 | OHPLBJKB_02776 | | Replication-associated recombination protein A | low | > 73 |
| Dickeya dadantii 3937 | 0.38 | DDA3937_RS02115 | | amino acid transporter | 0.57 | DDA3937_RS09605 | | replication-associated recombination protein A | low | > 74 |
| Escherichia coli BL21 | 0.38 | ECD_02754 | | arginine transporter | 0.58 | ECD_00896 | | recombination intermediate processing DNA-dependent ATPase | low | > 60 |
| Escherichia coli BW25113 | 0.38 | b2923 | argO | arginine exporter protein (NCBI) | 0.58 | b0892 | ycaJ | recombination protein (NCBI) | low | > 76 |
| Dickeya dianthicola ME23 | 0.38 | DZA65_RS02210 | | amino acid transporter | 0.57 | DZA65_RS09930 | | replication-associated recombination protein A | low | > 75 |
| Escherichia coli ECRC62 | 0.38 | BNILDI_09855 | argO | arginine exporter ArgO | 0.57 | BNILDI_20385 | rarA | replication-associated recombination protein RarA | — | — |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_01758 | | Arginine exporter protein ArgO | 0.46 | MPMX19_01528 | | Replication-associated recombination protein A | low | > 112 |
| Acidovorax sp. GW101-3H11 | 0.36 | Ac3H11_3377 | | Transporter, LysE family | 0.52 | Ac3H11_1696 | | FIG065221: Holliday junction DNA helicase | 0.28 | 78 |
| Dyella japonica UNC79MFTsu3.2 | 0.36 | ABZR86_RS10985 | | LysE/ArgO family amino acid transporter | 0.52 | ABZR86_RS01825 | | replication-associated recombination protein A | low | > 74 |
| Dinoroseobacter shibae DFL-12 | 0.36 | Dshi_0712 | | Lysine exporter protein (LYSE/YGGA) (RefSeq) | 0.44 | Dshi_0313 | | AAA ATPase central domain protein (RefSeq) | low | > 64 |
| Vibrio cholerae E7946 ATCC 55056 | 0.35 | CSW01_02555 | | amino acid transporter | 0.57 | CSW01_05630 | | replication-associated recombination protein A | low | > 62 |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS07435 | | amino acid transporter | 0.57 | BPHYT_RS05100 | | ATPase AAA | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_04883 | | L-lysine exporter family protein LysE/ArgO | 0.56 | H281DRAFT_00180 | | Recombination protein MgsA | low | > 103 |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS01605 | | amino acid transporter | 0.47 | AZOBR_RS06885 | | ATPase AAA | low | > 97 |
| Rhodanobacter sp. FW510-T8 | 0.33 | OKGIIK_01775 | | L-lysine exporter family protein LysE/ArgO | 0.52 | OKGIIK_07580 | rarA | recombination factor protein RarA | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.33 | Xcc-8004.1465.1 | | Transporter, LysE family | 0.54 | Xcc-8004.2744.1 | | FIG065221: Holliday junction DNA helicase | low | > 74 |
| Paraburkholderia graminis OAS925 | 0.33 | ABIE53_001718 | | L-lysine exporter family protein LysE/ArgO | 0.57 | ABIE53_001292 | | putative ATPase | low | > 113 |
| Erwinia tracheiphila SCR3 | 0.32 | LU632_RS05560 | | LysE family transporter | 0.57 | LU632_RS09755 | | replication-associated recombination protein A | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.31 | QEN71_RS23615 | | LysE/ArgO family amino acid transporter | 0.57 | QEN71_RS03415 | | replication-associated recombination protein A | low | > 153 |
| Alteromonas macleodii MIT1002 | 0.31 | MIT1002_00130 | | Arginine exporter protein ArgO | 0.54 | MIT1002_02178 | | Replication-associated recombination protein A | low | > 70 |
Not shown: 0 genomes with orthologs for PS417_22175 only; 26 genomes with orthologs for PS417_16480 only