Conservation of cofitness between GFF3392 and GFF2956 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3392 NADH dehydrogenase (EC 1.6.99.3) 1.0 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.59 1
Escherichia coli ECOR38 0.94 HEPCGN_23990 ndh NADH-quinone dehydrogenase 0.95 HEPCGN_16760 gltB3 Glutamate synthase domain 3 low > 87
Escherichia coli ECOR27 0.94 NOLOHH_21020 ndh NADH-quinone dehydrogenase 0.95 NOLOHH_09685 gltB glutamate synthase large subunit low > 75
Escherichia coli BW25113 0.94 b1109 ndh respiratory NADH dehydrogenase 2/cupric reductase (NCBI) 0.95 b3212 gltB glutamate synthase, large subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_02557 NADH dehydrogenase 0.95 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain low > 73
Escherichia coli ECRC62 0.94 BNILDI_19185 ndh NADH-quinone dehydrogenase 0.95 BNILDI_01850 gltB glutamate synthase large subunit low > 75
Escherichia coli Nissle 1917 0.94 ECOLIN_RS06400 NADH-quinone dehydrogenase 0.95 ECOLIN_RS18475 glutamate synthase large subunit low > 55
Escherichia fergusonii Becca 0.94 EFB2_02866 NADH dehydrogenase 0.95 EFB2_00611 Glutamate synthase [NADPH] large chain low > 86
Escherichia coli BL21 0.94 ECD_01105 respiratory NADH dehydrogenase 2/cupric reductase 0.95 ECD_03077 glutamate synthase, large subunit low > 61
Escherichia coli ECRC102 0.93 NIAGMN_24335 ndh NADH-quinone dehydrogenase 0.95 NIAGMN_15645 gltB glutamate synthase large subunit — —
Escherichia coli ECRC99 0.93 KEDOAH_24260 ndh NADH-quinone dehydrogenase 0.95 KEDOAH_10265 gltB glutamate synthase large subunit — —
Escherichia coli ECRC98 0.93 JDDGAC_07155 ndh NADH-quinone dehydrogenase 0.95 JDDGAC_21510 gltB glutamate synthase large subunit low > 86
Escherichia coli ECRC101 0.93 MCAODC_22855 ndh NADH-quinone dehydrogenase 0.95 MCAODC_08405 gltB glutamate synthase large subunit low > 87
Escherichia coli ECRC100 0.93 OKFHMN_03495 ndh NADH-quinone dehydrogenase 0.95 OKFHMN_17885 gltB glutamate synthase large subunit low > 80
Enterobacter asburiae PDN3 0.90 EX28DRAFT_1821 NADH dehydrogenase, FAD-containing subunit 0.94 EX28DRAFT_3275 Glutamate synthase domain 2 low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_01790 NADH dehydrogenase 0.94 MPMX20_04126 Glutamate synthase [NADPH] large chain low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS11175 NADH dehydrogenase 0.94 BWI76_RS25315 glutamate synthase large subunit — —
Rahnella sp. WP5 0.80 EX31_RS24510 NAD(P)/FAD-dependent oxidoreductase 0.87 EX31_RS12515 glutamate synthase large subunit low > 89
Erwinia tracheiphila SCR3 0.80 LU632_RS14740 NAD(P)/FAD-dependent oxidoreductase 0.88 LU632_RS21315 gltB glutamate synthase large subunit low > 74
Serratia liquefaciens MT49 0.80 IAI46_09910 NAD(P)/FAD-dependent oxidoreductase 0.89 IAI46_22345 glutamate synthase large subunit 0.62 27
Dickeya dadantii 3937 0.78 DDA3937_RS13040 NAD(P)/FAD-dependent oxidoreductase 0.88 DDA3937_RS01665 glutamate synthase large subunit 0.66 40
Dickeya dianthicola 67-19 0.78 HGI48_RS13105 NAD(P)/FAD-dependent oxidoreductase 0.88 HGI48_RS01560 glutamate synthase large subunit 0.73 23
Pectobacterium carotovorum WPP14 0.78 HER17_RS08735 NAD(P)/FAD-dependent oxidoreductase 0.88 HER17_RS19910 glutamate synthase large subunit low > 75
Dickeya dianthicola ME23 0.77 DZA65_RS13575 NAD(P)/FAD-dependent oxidoreductase 0.88 DZA65_RS01635 glutamate synthase large subunit low > 75
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_09465 NAD(P)/FAD-dependent oxidoreductase 0.76 CSW01_12030 glutamate synthase large subunit low > 62
Shewanella loihica PV-4 0.55 Shew_2195 NADH dehydrogenase (RefSeq) 0.67 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) low > 60
Pseudomonas putida KT2440 0.53 PP_0626 NADH dehydrogenase 0.59 PP_5076 L-glutamate synthase(NADPH) alpha subunit low > 96
Pseudomonas stutzeri RCH2 0.53 Psest_0715 NADH dehydrogenase, FAD-containing subunit 0.60 Psest_3711 Glutamate synthase domain 2 low > 67
Pseudomonas sp. RS175 0.51 PFR28_03740 NADH dehydrogenase 0.60 PFR28_05015 Glutamate synthase [NADPH] large chain low > 88
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_14255 NADH dehydrogenase 0.60 AO353_12515 glutamate synthase low > 101
Pseudomonas simiae WCS417 0.51 PS417_03855 NADH dehydrogenase 0.59 PS417_02000 glutamate synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_15965 NADH dehydrogenase 0.60 AO356_09375 glutamate synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_5132 NADH dehydrogenase (EC 1.6.99.3) 0.60 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 103
Alteromonas macleodii MIT1002 0.51 MIT1002_03885 NADH dehydrogenase 0.70 MIT1002_03139 Glutamate synthase [NADPH] large chain precursor low > 70
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS03905 NAD(P)/FAD-dependent oxidoreductase 0.59 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas sp. S08-1 0.50 OH686_16450 NADH dehydrogenase 0.59 OH686_10005 Glutamate synthase [NADPH] large chain low > 80
Pseudomonas fluorescens SBW25 0.50 PFLU_RS03905 NAD(P)/FAD-dependent oxidoreductase 0.59 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.59 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.59 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_2826 NADH dehydrogenase (EC 1.6.99.3) 0.59 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_1496 NADH dehydrogenase (EC 1.6.99.3) 0.60 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Marinobacter adhaerens HP15 0.49 HP15_3830 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.60 HP15_482 glutamate synthase subunit alpha — —
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_1466 NADH dehydrogenase, FAD-containing subunit 0.39 Ga0059261_1800 Glutamate synthase domain 2 low > 68
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS26100 pyridine nucleotide-disulfide oxidoreductase 0.40 RR42_RS18990 glutamate synthase — —
Variovorax sp. OAS795 0.48 ABID97_RS26565 NAD(P)/FAD-dependent oxidoreductase 0.41 ABID97_RS23225 glutamate synthase-related protein — —
Rhodopseudomonas palustris CGA009 0.44 TX73_005675 NAD(P)/FAD-dependent oxidoreductase 0.42 TX73_004590 glutamate synthase large subunit — —
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS15675 NAD(P)/FAD-dependent oxidoreductase 0.41 ABZR87_RS02570 glutamate synthase-related protein low > 80
Ralstonia solanacearum GMI1000 0.43 RS_RS11190 NAD(P)/FAD-dependent oxidoreductase 0.41 RS_RS14860 glutamate synthase subunit alpha low > 80
Ralstonia solanacearum UW163 0.42 UW163_RS09925 NAD(P)/FAD-dependent oxidoreductase 0.41 UW163_RS06700 glutamate synthase subunit alpha — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS03745 NAD(P)/FAD-dependent oxidoreductase 0.41 RALBFv3_RS06915 glutamate synthase subunit alpha low > 76
Ralstonia solanacearum PSI07 0.42 RPSI07_RS13485 NAD(P)/FAD-dependent oxidoreductase 0.41 RPSI07_RS10320 glutamate synthase subunit alpha low > 81
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS33605 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.40 BPHYT_RS17855 glutamate synthase low > 109
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS17890 NAD(P)/FAD-dependent oxidoreductase 0.40 QEN71_RS28010 glutamate synthase-related protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_06021 NADH dehydrogenase 0.40 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Shewanella amazonensis SB2B 0.41 Sama_0936 NADH dehydrogenase (RefSeq) 0.66 Sama_0857 gltB glutamate synthase subunit alpha (RefSeq) low > 62
Shewanella oneidensis MR-1 0.39 SO3517 ndh NADH dehydrogenase (NCBI ptt file) 0.66 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.39 Shewana3_3123 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.66 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) low > 73
Acinetobacter radioresistens SK82 0.37 MPMX26_01006 NADH dehydrogenase 0.58 MPMX26_02808 Glutamate synthase [NADPH] large chain — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF4021 NADH dehydrogenase (EC 1.6.99.3) 0.40 GFF1327 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 90
Rhodanobacter denitrificans MT42 0.36 LRK55_RS07230 NAD(P)/FAD-dependent oxidoreductase 0.51 LRK55_RS10665 glutamate synthase large subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS07490 NAD(P)/FAD-dependent oxidoreductase 0.51 LRK54_RS10960 glutamate synthase large subunit low > 59
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.4769.1 NADH dehydrogenase (EC 1.6.99.3) 0.51 Xcc-8004.44.1 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 74
Herbaspirillum seropedicae SmR1 0.17 HSERO_RS08760 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.41 HSERO_RS19595 glutamate synthase low > 78
Echinicola vietnamensis KMM 6221, DSM 17526 0.17 Echvi_3156 NADH dehydrogenase, FAD-containing subunit 0.39 Echvi_1244 Glutamate synthase domain 2 low > 79
Synechococcus elongatus PCC 7942 0.17 Synpcc7942_0101 ndbA type 2 NADH dehydrogenase 0.42 Synpcc7942_0890 glsF glutamate synthase (ferredoxin) — —
Acidovorax sp. GW101-3H11 0.16 Ac3H11_2167 NADH dehydrogenase (EC 1.6.99.3) 0.40 Ac3H11_4710 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.45 34
Sinorhizobium meliloti 1021 0.16 SMc04452 NADH dehydrogenase transmembrane protein 0.41 SMc04028 glutamate synthase low > 103
Variovorax sp. SCN45 0.16 GFF6814 NADH dehydrogenase (EC 1.6.99.3) 0.41 GFF5332 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.61 9
Mycobacterium tuberculosis H37Rv 0.15 Rv0392c Probable membrane NADH dehydrogenase NdhA 0.39 Rv3859c Probable ferredoxin-dependent glutamate synthase [NADPH] (large subunit) GltB (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH))(NADPH-GOGAT) — —
Agrobacterium fabrum C58 0.15 Atu2023 NADH dehydrogenase 0.41 Atu3784 glutamate synthase large subunit low > 89
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS14020 NAD(P)/FAD-dependent oxidoreductase 0.40 ABZR88_RS06905 glutamate synthase large subunit low > 71
Rhizobium sp. OAE497 0.14 ABIE40_RS30795 NAD(P)/FAD-dependent oxidoreductase 0.42 ABIE40_RS16275 glutamate synthase large subunit — —
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS15145 NAD(P)/FAD-dependent oxidoreductase 0.41 ABI39_RS20685 glutamate synthase large subunit low > 72
Dyella japonica UNC79MFTsu3.2 0.14 ABZR86_RS12540 NAD(P)/FAD-dependent oxidoreductase 0.50 ABZR86_RS16795 glutamate synthase large subunit low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.11 CA265_RS13110 FAD-dependent oxidoreductase 0.41 CA265_RS08700 glutamate synthase large subunit low > 88
Bosea sp. OAE506 0.11 ABIE41_RS00975 NAD(P)/FAD-dependent oxidoreductase 0.42 ABIE41_RS08565 glutamate synthase large subunit low > 77

Not shown: 7 genomes with orthologs for GFF3392 only; 17 genomes with orthologs for GFF2956 only