Conservation of cofitness between PGA1_c10910 and PGA1_c29790 in Phaeobacter inhibens DSM 17395

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c10910 dihydroorotase PyrC 1.0 PGA1_c29790 3-isopropylmalate dehydratase small subunit 0.87 14
Dinoroseobacter shibae DFL-12 0.73 Dshi_2371 dihydroorotase, homodimeric type (RefSeq) 0.78 Dshi_0083 3-isopropylmalate dehydratase, small subunit (RefSeq) 0.74 18
Sinorhizobium meliloti 1021 0.70 SMc02166 dihydroorotase 0.74 SMc03795 isopropylmalate isomerase small subunit 0.84 43
Agrobacterium fabrum C58 0.68 Atu0399 dihydroorotase 0.71 Atu2790 3-isopropylmalate dehydratase, small subunit 0.80 28
Rhizobium sp. OAE497 0.67 ABIE40_RS02105 dihydroorotase 0.75 ABIE40_RS19040 3-isopropylmalate dehydratase small subunit
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS02610 dihydroorotase 0.53 RR42_RS24180 3-isopropylmalate dehydratase
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS19235 dihydroorotase 0.55 HSERO_RS16505 3-isopropylmalate dehydratase small subunit
Ralstonia solanacearum GMI1000 0.58 RS_RS02420 dihydroorotase 0.55 RS_RS09995 3-isopropylmalate dehydratase small subunit
Ralstonia solanacearum PSI07 0.58 RPSI07_RS21625 dihydroorotase 0.55 RPSI07_RS14700 3-isopropylmalate dehydratase small subunit
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS07550 dihydroorotase 0.55 ABZR87_RS14535 3-isopropylmalate dehydratase small subunit
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS26855 dihydroorotase 0.54 QEN71_RS17615 3-isopropylmalate dehydratase small subunit low > 153
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS16675 dihydroorotase 0.55 BPHYT_RS33905 3-isopropylmalate dehydratase small subunit low > 109
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS11590 dihydroorotase 0.54 RALBFv3_RS02615 3-isopropylmalate dehydratase small subunit
Paraburkholderia graminis OAS925 0.57 ABIE53_003505 dihydroorotase 0.54 ABIE53_004803 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
Ralstonia solanacearum UW163 0.57 UW163_RS01995 dihydroorotase 0.54 UW163_RS11110 3-isopropylmalate dehydratase small subunit
Dechlorosoma suillum PS 0.57 Dsui_0250 dihydroorotase, homodimeric type 0.57 Dsui_3199 3-isopropylmalate dehydratase, small subunit
Dickeya dadantii 3937 0.57 DDA3937_RS13170 dihydroorotase 0.50 DDA3937_RS18130 3-isopropylmalate dehydratase small subunit 0.58 67
Azospirillum sp. SherDot2 0.57 MPMX19_01633 Dihydroorotase 0.74 MPMX19_00606 3-isopropylmalate dehydratase small subunit 1
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04265 dihydroorotase 0.55 H281DRAFT_06073 3-isopropylmalate dehydratase, small subunit
Dickeya dianthicola ME23 0.56 DZA65_RS13710 dihydroorotase 0.49 DZA65_RS19215 3-isopropylmalate dehydratase small subunit 0.82 8
Azospirillum brasilense Sp245 0.56 AZOBR_RS04460 dihydroorotase 0.74 AZOBR_RS14135 isopropylmalate isomerase 0.69 11
Dickeya dianthicola 67-19 0.56 HGI48_RS13235 dihydroorotase 0.50 HGI48_RS18070 3-isopropylmalate dehydratase small subunit 0.72 17
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS05715 dihydroorotase 0.58 PFLU_RS20575 3-isopropylmalate dehydratase small subunit
Pseudomonas fluorescens SBW25 0.55 PFLU_RS05715 dihydroorotase 0.58 PFLU_RS20575 3-isopropylmalate dehydratase small subunit
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_744 Dihydroorotase (EC 3.5.2.3) 0.58 Pf1N1B4_14 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Pseudomonas simiae WCS417 0.55 PS417_05630 dihydroorotase 0.59 PS417_18595 3-isopropylmalate dehydratase
Pseudomonas putida KT2440 0.55 PP_1086 dihydroorotase 0.60 PP_1986 3-isopropylmalate dehydratase small subunit
Pseudomonas stutzeri RCH2 0.55 Psest_3123 dihydroorotase, homodimeric type 0.61 Psest_2590 3-isopropylmalate dehydratase, small subunit 0.40 31
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_1747 Dihydroorotase (EC 3.5.2.3) 0.58 PfGW456L13_3947 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Marinobacter adhaerens HP15 0.54 HP15_1216 dihydroorotase, homodimeric type 0.60 HP15_1833 isopropylmalate isomerase small subunit 0.38 57
Rahnella sp. WP5 0.54 EX31_RS24385 dihydroorotase 0.49 EX31_RS03695 3-isopropylmalate dehydratase small subunit 0.92 31
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_04115 dihydroorotase 0.58 AO353_20625 3-isopropylmalate dehydratase
Variovorax sp. SCN45 0.54 GFF4557 Dihydroorotase (EC 3.5.2.3) 0.54 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 127
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_5588 Dihydroorotase (EC 3.5.2.3) 0.58 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_18315 dihydroorotase 0.57 AO356_21405 3-isopropylmalate dehydratase
Pseudomonas sp. RS175 0.54 PFR28_03355 Dihydroorotase 0.58 PFR28_02823 3-isopropylmalate dehydratase small subunit 1
Pseudomonas sp. S08-1 0.54 OH686_03940 dihydroorotase, homodimeric type 0.59 OH686_04475 3-isopropylmalate dehydratase small subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF523 Dihydroorotase (EC 3.5.2.3) 0.54 GFF3361 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 90
Pectobacterium carotovorum WPP14 0.54 HER17_RS08600 dihydroorotase 0.48 HER17_RS03070 3-isopropylmalate dehydratase small subunit 0.96 26
Serratia liquefaciens MT49 0.54 IAI46_09740 dihydroorotase 0.49 IAI46_03340 3-isopropylmalate dehydratase small subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_3894 dihydroorotase 0.59 Psyr_1984 3-isopropylmalate dehydratase, small subunit
Variovorax sp. OAS795 0.54 ABID97_RS06040 dihydroorotase 0.55 ABID97_RS08460 3-isopropylmalate dehydratase small subunit
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_3894 dihydroorotase 0.59 Psyr_1984 3-isopropylmalate dehydratase, small subunit
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1241 dihydroorotase (EC 3.5.2.3) 0.57 B158DRAFT_1320 3-isopropylmalate dehydratase, small subunit
Shewanella sp. ANA-3 0.53 Shewana3_3263 dihydroorotase (RefSeq) 0.46 Shewana3_3758 leuD isopropylmalate isomerase small subunit (RefSeq) 0.84 46
Castellaniella sp019104865 MT123 0.53 ABCV34_RS09730 dihydroorotase 0.53 ABCV34_RS04285 3-isopropylmalate dehydratase small subunit
Shewanella amazonensis SB2B 0.53 Sama_2870 dihydroorotase (RefSeq) 0.45 Sama_0338 leuD isopropylmalate isomerase small subunit (RefSeq) low > 62
Acidovorax sp. GW101-3H11 0.53 Ac3H11_1963 Dihydroorotase (EC 3.5.2.3) 0.54 Ac3H11_1527 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Enterobacter asburiae PDN3 0.53 EX28DRAFT_1869 dihydroorotase (EC 3.5.2.3) 0.50 EX28DRAFT_3667 3-isopropylmalate dehydratase, small subunit
Enterobacter sp. TBS_079 0.52 MPMX20_01741 Dihydroorotase 0.48 MPMX20_00766 3-isopropylmalate dehydratase small subunit 1 0.69 66
Pantoea sp. MT58 0.52 IAI47_12215 dihydroorotase 0.50 IAI47_16015 3-isopropylmalate dehydratase small subunit 0.78 41
Escherichia coli ECRC62 0.52 BNILDI_19420 pyrC dihydroorotase 0.48 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECOR27 0.52 NOLOHH_21260 pyrC dihydroorotase 0.48 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit low > 57
Escherichia coli BW25113 0.52 b1062 pyrC dihydroorotase (NCBI) 0.48 b0071 leuD isopropylmalate isomerase small subunit (NCBI) 0.74 64
Escherichia coli ECRC102 0.52 NIAGMN_24100 pyrC dihydroorotase 0.47 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02603 Dihydroorotase 0.48 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit low > 73
Escherichia coli ECRC99 0.52 KEDOAH_24025 pyrC dihydroorotase 0.47 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli BL21 0.52 ECD_01058 dihydro-orotase 0.48 ECD_00073 3-isopropylmalate dehydratase small subunit low > 60
Escherichia fergusonii Becca 0.52 EFB2_02912 Dihydroorotase 0.49 EFB2_03974 3-isopropylmalate dehydratase small subunit low > 86
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_18760 dihydroorotase 0.51 CSW01_12610 3-isopropylmalate dehydratase small subunit low > 62
Escherichia coli ECRC98 0.52 JDDGAC_07390 pyrC dihydroorotase 0.47 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC101 0.52 MCAODC_23090 pyrC dihydroorotase 0.47 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit
Shewanella oneidensis MR-1 0.52 SO3695 pyrC dihydroorotase, homodimeric type (NCBI ptt file) 0.46 SO4233 leuD 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) 0.81 50
Escherichia coli ECOR38 0.52 HEPCGN_23760 pyrC dihydroorotase 0.49 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit low > 85
Escherichia coli ECRC101 0.52 OKFHMN_03730 pyrC dihydroorotase 0.47 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit
Rhodanobacter denitrificans MT42 0.52 LRK55_RS10600 dihydroorotase 0.41 LRK55_RS07100 3-isopropylmalate dehydratase small subunit low > 63
Erwinia tracheiphila SCR3 0.52 LU632_RS10340 pyrC dihydroorotase 0.49 LU632_RS02865 leuD 3-isopropylmalate dehydratase small subunit 0.70 49
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS10900 dihydroorotase 0.41 LRK54_RS07370 3-isopropylmalate dehydratase small subunit
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12970 pyrC dihydroorotase 0.39 OKGIIK_13590 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli Nissle 1917 0.51 ECOLIN_RS06160 dihydroorotase 0.49 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit low > 52
Alteromonas macleodii MIT1002 0.51 MIT1002_03750 Dihydroorotase 0.44 MIT1002_00946 3-isopropylmalate dehydratase small subunit 1
Klebsiella michiganensis M5al 0.51 BWI76_RS10990 dihydroorotase 0.49 BWI76_RS04665 3-isopropylmalate dehydratase small subunit 0.44 44
Acinetobacter radioresistens SK82 0.51 MPMX26_02262 Dihydroorotase 0.60 MPMX26_00346 3-isopropylmalate dehydratase small subunit 1
Shewanella loihica PV-4 0.50 Shew_0728 dihydroorotase (RefSeq) 0.47 Shew_3469 isopropylmalate isomerase small subunit (RefSeq) 0.74 43
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF3342 Dihydroorotase (EC 3.5.2.3) 0.48 GFF167 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 78

Not shown: 0 genomes with orthologs for PGA1_c10910 only; 23 genomes with orthologs for PGA1_c29790 only