Conservation of cofitness between PGA1_c10910 and PGA1_c29490 in Phaeobacter inhibens DSM 17395

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c10910 dihydroorotase PyrC 1.0 PGA1_c29490 dihydroxy-acid dehydratase LivD 0.87 15
Dinoroseobacter shibae DFL-12 0.73 Dshi_2371 dihydroorotase, homodimeric type (RefSeq) 0.32 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Sinorhizobium meliloti 1021 0.70 SMc02166 dihydroorotase 0.77 SMc04045 dihydroxy-acid dehydratase 0.88 20
Agrobacterium fabrum C58 0.68 Atu0399 dihydroorotase 0.76 Atu1918 dihydroxy-acid dehydratase — —
Rhizobium sp. OAE497 0.67 ABIE40_RS02105 dihydroorotase 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS02610 dihydroorotase 0.30 RR42_RS16210 dihydroxy-acid dehydratase — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS19235 dihydroorotase 0.70 HSERO_RS02650 dihydroxy-acid dehydratase — —
Ralstonia solanacearum GMI1000 0.58 RS_RS02420 dihydroorotase 0.30 RS_RS12105 dihydroxy-acid dehydratase — —
Ralstonia solanacearum PSI07 0.58 RPSI07_RS21625 dihydroorotase 0.30 RPSI07_RS12840 dihydroxy-acid dehydratase — —
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS07550 dihydroorotase 0.73 ABZR87_RS00240 dihydroxy-acid dehydratase — —
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS26855 dihydroorotase 0.73 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS16675 dihydroorotase 0.70 BPHYT_RS10100 dihydroxy-acid dehydratase 0.54 79
Paraburkholderia graminis OAS925 0.57 ABIE53_003505 dihydroorotase 0.72 ABIE53_006513 dihydroxy-acid dehydratase — —
Ralstonia solanacearum UW163 0.57 UW163_RS01995 dihydroorotase 0.30 UW163_RS09135 dihydroxy-acid dehydratase — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS11590 dihydroorotase 0.30 RALBFv3_RS04535 dihydroxy-acid dehydratase — —
Dickeya dadantii 3937 0.57 DDA3937_RS13170 dihydroorotase 0.70 DDA3937_RS20155 dihydroxy-acid dehydratase 0.69 27
Dechlorosoma suillum PS 0.57 Dsui_0250 dihydroorotase, homodimeric type 0.72 Dsui_1122 dihydroxy-acid dehydratase — —
Azospirillum sp. SherDot2 0.57 MPMX19_01633 Dihydroorotase 0.72 MPMX19_05356 Dihydroxy-acid dehydratase — —
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04265 dihydroorotase 0.72 H281DRAFT_05312 dihydroxyacid dehydratase — —
Dickeya dianthicola ME23 0.56 DZA65_RS13710 dihydroorotase 0.69 DZA65_RS21335 dihydroxy-acid dehydratase 0.72 22
Azospirillum brasilense Sp245 0.56 AZOBR_RS04460 dihydroorotase 0.73 AZOBR_RS15015 dihydroxy-acid dehydratase low > 97
Dickeya dianthicola 67-19 0.56 HGI48_RS13235 dihydroorotase 0.70 HGI48_RS20295 dihydroxy-acid dehydratase 0.49 60
Pseudomonas fluorescens SBW25 0.55 PFLU_RS05715 dihydroorotase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS05715 dihydroorotase 0.75 PFLU_RS28535 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_744 Dihydroorotase (EC 3.5.2.3) 0.75 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Pseudomonas simiae WCS417 0.55 PS417_05630 dihydroorotase 0.74 PS417_26890 dihydroxy-acid dehydratase — —
Pseudomonas stutzeri RCH2 0.55 Psest_3123 dihydroorotase, homodimeric type 0.74 Psest_0234 dihydroxy-acid dehydratase — —
Pseudomonas putida KT2440 0.55 PP_1086 dihydroorotase 0.74 PP_5128 Dihydroxy-acid dehydratase — —
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_1747 Dihydroorotase (EC 3.5.2.3) 0.75 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Rahnella sp. WP5 0.54 EX31_RS24385 dihydroorotase 0.66 EX31_RS15005 dihydroxy-acid dehydratase 0.93 16
Marinobacter adhaerens HP15 0.54 HP15_1216 dihydroorotase, homodimeric type 0.68 HP15_595 dihydroxy-acid dehydratase 0.43 33
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_5588 Dihydroorotase (EC 3.5.2.3) 0.74 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Variovorax sp. SCN45 0.54 GFF4557 Dihydroorotase (EC 3.5.2.3) 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_04115 dihydroorotase 0.75 AO353_08345 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_18315 dihydroorotase 0.74 AO356_13250 dihydroxy-acid dehydratase — —
Pseudomonas sp. S08-1 0.54 OH686_03940 dihydroorotase, homodimeric type 0.74 OH686_14100 dihydroxy-acid dehydratase — —
Pseudomonas sp. RS175 0.54 PFR28_03355 Dihydroorotase 0.75 PFR28_04278 Dihydroxy-acid dehydratase — —
Pectobacterium carotovorum WPP14 0.54 HER17_RS08600 dihydroorotase 0.71 HER17_RS01075 dihydroxy-acid dehydratase 0.97 14
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF523 Dihydroorotase (EC 3.5.2.3) 0.61 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 90
Serratia liquefaciens MT49 0.54 IAI46_09740 dihydroorotase 0.69 IAI46_24345 dihydroxy-acid dehydratase 0.72 41
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_3894 dihydroorotase 0.74 Psyr_0469 dihydroxyacid dehydratase — —
Variovorax sp. OAS795 0.54 ABID97_RS06040 dihydroorotase 0.31 ABID97_RS17500 dihydroxy-acid dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_3894 dihydroorotase 0.74 Psyr_0469 dihydroxyacid dehydratase — —
Shewanella sp. ANA-3 0.53 Shewana3_3263 dihydroorotase (RefSeq) 0.69 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.87 20
Shewanella amazonensis SB2B 0.53 Sama_2870 dihydroorotase (RefSeq) 0.69 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.58 39
Castellaniella sp019104865 MT123 0.53 ABCV34_RS09730 dihydroorotase 0.69 ABCV34_RS14810 dihydroxy-acid dehydratase — —
Acidovorax sp. GW101-3H11 0.53 Ac3H11_1963 Dihydroorotase (EC 3.5.2.3) 0.73 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Enterobacter asburiae PDN3 0.53 EX28DRAFT_1869 dihydroorotase (EC 3.5.2.3) 0.71 EX28DRAFT_4443 dihydroxy-acid dehydratase — —
Enterobacter sp. TBS_079 0.52 MPMX20_01741 Dihydroorotase 0.71 MPMX20_04499 Dihydroxy-acid dehydratase 0.81 18
Pantoea sp. MT58 0.52 IAI47_12215 dihydroorotase 0.71 IAI47_01035 dihydroxy-acid dehydratase 0.79 28
Escherichia coli ECRC62 0.52 BNILDI_19420 pyrC dihydroorotase 0.71 BNILDI_04750 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECOR27 0.52 NOLOHH_21260 pyrC dihydroorotase 0.71 NOLOHH_06775 ilvD dihydroxy-acid dehydratase 0.64 6
Escherichia coli BW25113 0.52 b1062 pyrC dihydroorotase (NCBI) 0.71 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.79 34
Escherichia coli ECRC99 0.52 KEDOAH_24025 pyrC dihydroorotase 0.71 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Shewanella oneidensis MR-1 0.52 SO3695 pyrC dihydroorotase, homodimeric type (NCBI ptt file) 0.68 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.82 37
Escherichia fergusonii Becca 0.52 EFB2_02912 Dihydroorotase 0.71 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC101 0.52 MCAODC_23090 pyrC dihydroorotase 0.71 MCAODC_05145 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC98 0.52 JDDGAC_07390 pyrC dihydroorotase 0.71 JDDGAC_18260 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC102 0.52 NIAGMN_24100 pyrC dihydroorotase 0.71 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_18760 dihydroorotase 0.73 CSW01_00140 dihydroxy-acid dehydratase low > 62
Escherichia coli BL21 0.52 ECD_01058 dihydro-orotase 0.71 ECD_03649 dihydroxyacid dehydratase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02603 Dihydroorotase 0.71 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECRC101 0.52 OKFHMN_03730 pyrC dihydroorotase 0.71 OKFHMN_14640 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECOR38 0.52 HEPCGN_23760 pyrC dihydroorotase 0.71 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Rhodanobacter denitrificans MT42 0.52 LRK55_RS10600 dihydroorotase 0.26 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Erwinia tracheiphila SCR3 0.52 LU632_RS10340 pyrC dihydroorotase 0.68 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS10900 dihydroorotase 0.26 LRK54_RS10320 dihydroxy-acid dehydratase — —
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12970 pyrC dihydroorotase 0.28 OKGIIK_13600 ilvD dihydroxy-acid dehydratase — —
Escherichia coli Nissle 1917 0.51 ECOLIN_RS06160 dihydroorotase 0.71 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 52
Alteromonas macleodii MIT1002 0.51 MIT1002_03750 Dihydroorotase 0.71 MIT1002_04041 Dihydroxy-acid dehydratase — —
Klebsiella michiganensis M5al 0.51 BWI76_RS10990 dihydroorotase 0.71 BWI76_RS00975 dihydroxy-acid dehydratase 0.44 39
Acinetobacter radioresistens SK82 0.51 MPMX26_02262 Dihydroorotase 0.30 MPMX26_03019 Dihydroxy-acid dehydratase — —
Shewanella loihica PV-4 0.50 Shew_0728 dihydroorotase (RefSeq) 0.69 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.77 17
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF3342 Dihydroorotase (EC 3.5.2.3) 0.71 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78

Not shown: 1 genomes with orthologs for PGA1_c10910 only; 28 genomes with orthologs for PGA1_c29490 only