| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | 1.0 | GFF2818 | | Phosphoenolpyruvate synthase (EC 2.7.9.2) | 0.90 | 19 |
| Variovorax sp. OAS795 | 0.95 | ABID97_RS06335 | | metalloprotease TldD | 0.97 | ABID97_RS10815 | | phosphoenolpyruvate synthase | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.86 | Ac3H11_4036 | | TldD protein, part of TldE/TldD proteolytic complex | 0.91 | Ac3H11_206 | | Phosphoenolpyruvate synthase (EC 2.7.9.2) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.85 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.89 | GFF3920 | | Phosphoenolpyruvate synthase (EC 2.7.9.2) | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.73 | RR42_RS05875 | | protease TldD | 0.78 | RR42_RS11790 | | phosphoenolpyruvate synthase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.72 | ABZR87_RS01105 | | metalloprotease TldD | 0.79 | ABZR87_RS11925 | | phosphoenolpyruvate synthase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.72 | RS_RS13315 | | metalloprotease TldD | 0.78 | RS_RS07130 | | phosphoenolpyruvate synthase | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.72 | BPHYT_RS03540 | | peptidase C69 | 0.77 | BPHYT_RS12055 | | phosphoenolpyruvate synthase | low | > 109 |
| Ralstonia solanacearum UW163 | 0.72 | UW163_RS08170 | | metalloprotease TldD | 0.77 | UW163_RS13805 | | phosphoenolpyruvate synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.72 | RALBFv3_RS05455 | | metalloprotease TldD | 0.78 | RALBFv3_RS00475 | | phosphoenolpyruvate synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS26555 | | metalloprotease TldD | 0.77 | QEN71_RS06505 | | phosphoenolpyruvate synthase | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS11850 | | metalloprotease TldD | 0.78 | RPSI07_RS17015 | | phosphoenolpyruvate synthase | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.77 | H281DRAFT_00627 | | phosphoenolpyruvate synthase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.71 | ABIE53_000851 | | TldD protein | 0.77 | ABIE53_002485 | | pyruvate,water dikinase | low | > 113 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS02590 | | metalloprotease TldD | 0.75 | ABCV34_RS04025 | | phosphoenolpyruvate synthase | — | — |
| Dechlorosoma suillum PS | 0.67 | Dsui_3401 | | putative Zn-dependent protease-like protein | 0.70 | Dsui_2677 | | phosphoenolpyruvate synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.62 | ABZR86_RS21715 | | metalloprotease TldD | 0.64 | ABZR86_RS07250 | | phosphoenolpyruvate synthase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.61 | OKGIIK_10280 | tldD | metalloprotease TldD | 0.65 | OKGIIK_07970 | ppsA | phosphoenolpyruvate synthase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS03145 | | metalloprotease TldD | 0.65 | LRK55_RS16585 | | phosphoenolpyruvate synthase | low | > 63 |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00227 | | protease TldD | 0.64 | MIT1002_01816 | | Phosphoenolpyruvate synthase | low | > 70 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.59 | Xcc-8004.1883.1 | | TldD protein, part of TldE/TldD proteolytic complex | 0.62 | Xcc-8004.2412.1 | | Phosphoenolpyruvate synthase (EC 2.7.9.2) | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS03395 | | metalloprotease TldD | 0.65 | LRK54_RS16870 | | phosphoenolpyruvate synthase | low | > 59 |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | 0.64 | Shewana3_1736 | | phosphoenolpyruvate synthase (RefSeq) | low | > 73 |
| Pseudomonas putida KT2440 | 0.58 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | 0.66 | PP_2082 | | phosphoenolpyruvate synthetase | low | > 96 |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS06795 | | metalloprotease TldD | 0.63 | ABIE51_RS09520 | | phosphoenolpyruvate synthase | low | > 62 |
| Pantoea sp. MT58 | 0.58 | IAI47_02465 | | metalloprotease TldD | 0.65 | IAI47_10905 | | phosphoenolpyruvate synthase | low | > 76 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.66 | Psyr_2090 | | phosphoenolpyruvate synthase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.66 | Psyr_2090 | | phosphoenolpyruvate synthase | low | > 86 |
| Shewanella oneidensis MR-1 | 0.57 | SO4091 | tldD | tldD protein (NCBI ptt file) | 0.64 | SO2644 | ppsA | phosphoenolpyruvate synthase (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.56 | Shew_0410 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.64 | Shew_1549 | | phosphoenolpyruvate synthase (RefSeq) | — | — |
| Serratia liquefaciens MT49 | 0.56 | IAI46_22685 | | metalloprotease TldD | 0.64 | IAI46_11115 | | phosphoenolpyruvate synthase | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.67 | PFLU_RS22630 | | phosphoenolpyruvate synthase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_05215 | | protease TldD | 0.67 | AO353_00865 | | phosphoenolpyruvate synthase | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.67 | PFLU_RS22630 | | phosphoenolpyruvate synthase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_04285 | | protease TldD | 0.67 | PS417_21020 | | phosphoenolpyruvate synthase | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.67 | Psest_2316 | | phosphoenolpyruvate synthase | low | > 67 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS01460 | | metalloprotease TldD | 0.64 | DDA3937_RS12805 | | phosphoenolpyruvate synthase | low | > 74 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_00161 | | Metalloprotease TldD | 0.66 | PFR28_01038 | | Phosphoenolpyruvate synthase | low | > 88 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS01380 | | metalloprotease TldD | 0.65 | HGI48_RS12875 | | phosphoenolpyruvate synthase | low | > 71 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | 0.67 | Pf1N1B4_3826 | | Phosphoenolpyruvate synthase (EC 2.7.9.2) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_07095 | | protease TldD | 0.66 | AO356_02825 | | phosphoenolpyruvate synthase | low | > 104 |
| Pseudomonas sp. S08-1 | 0.55 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.67 | OH686_01660 | | phosphoenolpyruvate synthase | low | > 80 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | 0.66 | Pf6N2E2_2389 | | Phosphoenolpyruvate synthase (EC 2.7.9.2) | 0.25 | 63 |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS01440 | | metalloprotease TldD | 0.64 | DZA65_RS13340 | | phosphoenolpyruvate synthase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_04151 | | Metalloprotease TldD | 0.65 | MPMX20_01922 | | Phosphoenolpyruvate synthase | low | > 85 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | 0.66 | PfGW456L13_4112 | | Phosphoenolpyruvate synthase (EC 2.7.9.2) | low | > 87 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS25470 | | metalloprotease TldD | 0.64 | BWI76_RS17065 | | phosphoenolpyruvate synthase | low | > 92 |
| Escherichia coli BL21 | 0.55 | ECD_03104 | | putative peptidase | 0.65 | ECD_01671 | | phosphoenolpyruvate synthase | low | > 61 |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_21380 | tldD | metalloprotease TldD | 0.65 | JDDGAC_01720 | ppsA | phosphoenolpyruvate synthase | low | > 86 |
| Escherichia fergusonii Becca | 0.55 | EFB2_00586 | | Metalloprotease TldD | 0.65 | EFB2_02289 | | Phosphoenolpyruvate synthase | low | > 86 |
| Escherichia coli ECRC62 | 0.55 | BNILDI_01980 | tldD | metalloprotease TldD | 0.65 | BNILDI_16455 | ppsA | phosphoenolpyruvate synthase | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_02220 | | metalloprotease TldD | 0.62 | CSW01_19050 | | phosphoenolpyruvate synthase | low | > 62 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_16620 | tldD | metalloprotease TldD | 0.65 | HEPCGN_05510 | ppsA | phosphoenolpyruvate synthase | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS20140 | | metalloprotease TldD | 0.64 | HER17_RS08885 | | phosphoenolpyruvate synthase | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | 0.64 | GFF3539 | | Phosphoenolpyruvate synthase (EC 2.7.9.2) | low | > 78 |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_17755 | tldD | metalloprotease TldD | 0.65 | OKFHMN_27145 | ppsA | phosphoenolpyruvate synthase | low | > 80 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_08275 | tldD | metalloprotease TldD | 0.65 | MCAODC_18265 | ppsA | phosphoenolpyruvate synthase | low | > 87 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_10395 | tldD | metalloprotease TldD | 0.65 | KEDOAH_00965 | ppsA | phosphoenolpyruvate synthase | — | — |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_15515 | tldD | metalloprotease TldD | 0.65 | NIAGMN_00920 | ppsA | phosphoenolpyruvate synthase | — | — |
| Shewanella amazonensis SB2B | 0.55 | Sama_0474 | | TldD protein (RefSeq) | 0.65 | Sama_2072 | | phosphoenolpyruvate synthase (RefSeq) | 0.47 | 55 |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS18595 | | metalloprotease TldD | 0.65 | ECOLIN_RS09510 | | phosphoenolpyruvate synthase | — | — |
| Escherichia coli BW25113 | 0.55 | b3244 | tldD | predicted peptidase (NCBI) | 0.65 | b1702 | pps | phosphoenolpyruvate synthase (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_09555 | tldD | metalloprotease TldD | 0.65 | NOLOHH_17665 | ppsA | phosphoenolpyruvate synthase | low | > 75 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.65 | EX28DRAFT_1704 | | phosphoenolpyruvate synthase (EC 2.7.9.2) | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS21420 | tldD | metalloprotease TldD | 0.64 | LU632_RS11025 | ppsA | phosphoenolpyruvate synthase | low | > 74 |
| Rahnella sp. WP5 | 0.54 | EX31_RS12265 | | metalloprotease TldD | 0.64 | EX31_RS13935 | | phosphoenolpyruvate synthase | low | > 89 |
| Kangiella aquimarina DSM 16071 | 0.52 | B158DRAFT_2072 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.65 | B158DRAFT_1553 | | phosphoenolpyruvate synthase (EC 2.7.9.2) | low | > 40 |
| Synechococcus elongatus PCC 7942 | 0.20 | Synpcc7942_1127 | tldD | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.52 | Synpcc7942_0781 | ppsA | phosphoenolpyruvate synthase | low | > 38 |
| Methanococcus maripaludis S2 | 0.17 | MMP_RS07650 | | TldD/PmbA family protein | 0.27 | MMP_RS05655 | | phosphoenolpyruvate synthase | — | — |
| Methanococcus maripaludis JJ | 0.16 | MMJJ_RS06710 | | TldD/PmbA family protein | 0.27 | MMJJ_RS08695 | | phosphoenolpyruvate synthase | — | — |
Not shown: 20 genomes with orthologs for GFF4449 only; 3 genomes with orthologs for GFF2818 only