Conservation of cofitness between GFF829 and GFF2733 in Hydrogenophaga sp. GW460-11-11-14-LB1

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF829 DNA repair protein RecN 1.0 GFF2733 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.73 17
Acidovorax sp. GW101-3H11 0.59 Ac3H11_3460 DNA repair protein RecN 0.83 Ac3H11_4483 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD low > 79
Variovorax sp. SCN45 0.59 GFF2357 DNA repair protein RecN 0.82 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD low > 127
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26535 DNA repair protein RecN 0.70 QEN71_RS26580 FAD-linked oxidase C-terminal domain-containing protein low > 153
Ralstonia solanacearum UW163 0.45 UW163_RS08210 DNA repair protein RecN 0.72 UW163_RS08135 FAD-binding oxidoreductase
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS05415 DNA repair protein RecN 0.72 RALBFv3_RS05490 FAD-binding oxidoreductase low > 76
Ralstonia solanacearum PSI07 0.45 RPSI07_RS11890 DNA repair protein RecN 0.71 RPSI07_RS11810 FAD-binding oxidoreductase low > 81
Ralstonia solanacearum GMI1000 0.44 RS_RS13275 DNA repair protein RecN 0.71 RS_RS13350 FAD-binding oxidoreductase low > 80
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS01065 DNA repair protein RecN 0.70 ABZR87_RS01135 FAD-linked oxidase C-terminal domain-containing protein low > 80
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS05910 DNA repair protein 0.75 RR42_RS29885 glycolate oxidase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_04692 DNA replication and repair protein RecN 0.70 H281DRAFT_04683 glycolate oxidase low > 103
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS03060 DNA repair protein 0.71 HSERO_RS19105 FAD-binding protein low > 78
Castellaniella sp019104865 MT123 0.43 ABCV34_RS07470 DNA repair protein RecN 0.63 ABCV34_RS06815 FAD-linked oxidase C-terminal domain-containing protein low > 48
Paraburkholderia graminis OAS925 0.43 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.70 ABIE53_000844 glycolate oxidase low > 113
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS03560 DNA repair protein 0.71 BPHYT_RS03510 FAD-binding protein low > 109
Dechlorosoma suillum PS 0.42 Dsui_3072 DNA repair protein RecN 0.66 Dsui_3415 FAD/FMN-dependent dehydrogenase low > 51
Escherichia coli BL21 0.35 ECD_02504 recombination and repair protein 0.60 ECD_02848 glycolate oxidase subunit, FAD-linked low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01091 DNA repair protein RecN 0.60 OHPLBJKB_00727 putative FAD-linked oxidoreductase low > 73
Escherichia coli ECOR27 0.35 NOLOHH_12815 recN DNA repair protein RecN 0.60 NOLOHH_10920 glcD glycolate oxidase subunit GlcD low > 57
Escherichia coli ECOR38 0.35 HEPCGN_20265 recN DNA repair protein RecN 0.60 HEPCGN_17995 glcD glycolate oxidase subunit GlcD low > 85
Escherichia coli ECRC62 0.35 BNILDI_11620 recN DNA repair protein RecN 0.60 BNILDI_00595 glcD glycolate oxidase subunit GlcD
Escherichia coli BW25113 0.35 b2616 recN recombination and repair protein (NCBI) 0.60 b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) low > 76
Escherichia fergusonii Becca 0.35 EFB2_01277 DNA repair protein RecN 0.60 EFB2_00835 putative FAD-linked oxidoreductase low > 86
Escherichia coli Nissle 1917 0.35 ECOLIN_RS14775 DNA repair protein RecN 0.59 ECOLIN_RS17140 glycolate oxidase subunit GlcD low > 52
Marinobacter adhaerens HP15 0.34 HP15_3084 DNA repair protein RecN 0.56 HP15_3024 FAD linked oxidase domain protein low > 73
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_3370 DNA repair protein RecN 0.60 Pf6N2E2_137 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD low > 103
Pseudomonas sp. RS175 0.33 PFR28_00071 DNA repair protein RecN 0.61 PFR28_02758 putative FAD-linked oxidoreductase low > 88
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_4197 DNA replication and repair protein RecN 0.60 Psyr_3331 Glycolate oxidase subunit GlcD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_4197 DNA replication and repair protein RecN 0.60 Psyr_3331 Glycolate oxidase subunit GlcD low > 86
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_07510 DNA repair protein RecN 0.61 AO356_01090 glycolate oxidase subunit GlcD low > 104
Pseudomonas stutzeri RCH2 0.33 Psest_0962 DNA repair protein RecN 0.61 Psest_3841 D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) (from data) low > 67
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_1178 DNA repair protein RecN 0.61 Pf1N1B4_5862 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD low > 87
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_05660 DNA repair protein RecN 0.60 AO353_21310 glycolate oxidase subunit GlcD low > 101
Pseudomonas putida KT2440 0.32 PP_4729 factor used in recombination and DNA repair 0.60 PP_3745 glycolate oxidase, putative FAD-linked subunit low > 96
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS05665 DNA repair protein RecN 0.24 ABZR86_RS11500 FAD-linked oxidase C-terminal domain-containing protein low > 74
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.3431.1 DNA repair protein RecN 0.25 Xcc-8004.4376.1 D-2-hydroxyglutarate dehydrogenase low > 74
Rhodanobacter denitrificans MT42 0.30 LRK55_RS17815 DNA repair protein RecN 0.26 LRK55_RS11910 FAD-linked oxidase C-terminal domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS17960 DNA repair protein RecN 0.26 LRK54_RS12175 FAD-binding protein low > 59
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_07340 recN DNA repair protein RecN 0.27 OKGIIK_11750 Dimethylmenaquinone methyltransferase low > 52
Lysobacter sp. OAE881 0.29 ABIE51_RS11655 DNA repair protein RecN 0.24 ABIE51_RS04670 FAD-linked oxidase C-terminal domain-containing protein low > 62
Sinorhizobium meliloti 1021 0.28 SMc01877 DNA repair protein 0.42 SMc00832 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) low > 103
Agrobacterium fabrum C58 0.28 Atu2083 DNA repair protein RecN 0.42 Atu0665 glycolate oxidase subunit low > 89
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1026 DNA repair protein RecN 0.54 Ga0059261_2631 FAD/FMN-containing dehydrogenases low > 68
Azospirillum brasilense Sp245 0.26 AZOBR_RS12395 DNA repair protein RecN 0.50 AZOBR_RS05725 FAD-binding protein
Rhodopseudomonas palustris CGA009 0.26 TX73_018240 DNA repair protein RecN 0.52 TX73_005805 FAD-linked oxidase C-terminal domain-containing protein low > 86
Azospirillum sp. SherDot2 0.26 MPMX19_01601 DNA repair protein RecN 0.50 MPMX19_00301 putative FAD-linked oxidoreductase low > 112
Bosea sp. OAE506 0.25 ABIE41_RS12645 DNA repair protein RecN 0.40 ABIE41_RS22150 FAD-linked oxidase C-terminal domain-containing protein low > 77
Phaeobacter inhibens DSM 17395 0.25 PGA1_c09720 DNA repair protein RecN 0.40 PGA1_c29720 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS06580 DNA repair protein RecN 0.25 ABZR88_RS06545 FAD-binding oxidoreductase low > 71
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_1779 recN DNA repair protein RecN 0.39 Synpcc7942_0276 glcD glycolate oxidase subunit GlcD low > 38
Dinoroseobacter shibae DFL-12 0.22 Dshi_2413 DNA repair protein RecN (RefSeq) 0.41 Dshi_2896 FAD linked oxidase domain protein (RefSeq) low > 64
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS14855 DNA repair protein RecN 0.25 CA265_RS09620 FAD-binding oxidoreductase low > 88
Mycobacterium tuberculosis H37Rv 0.20 Rv1696 Probable DNA repair protein RecN (recombination protein N) 0.24 Rv1257c Probable oxidoreductase low > 58
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_13235 DNA repair protein RecN 0.24 CA264_13425 FAD-binding oxidoreductase low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU2463 recN DNA repair protein RecN (TIGR) 0.28 DVU3027 glcD glycolate oxidase, subunit GlcD (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_0923 SMC domain protein (RefSeq) 0.32 DvMF_1862 FAD linked oxidase domain protein (RefSeq) low > 51

Not shown: 44 genomes with orthologs for GFF829 only; 2 genomes with orthologs for GFF2733 only