Conservation of cofitness between PS417_27245 and PS417_13790 in Pseudomonas simiae WCS417

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27245 aminotransferase DegT 1.0 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.47 5
Pseudomonas fluorescens SBW25 0.98 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.95 PFLU_RS14830 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.81 16
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.95 PFLU_RS14830 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 109
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_08725 aminotransferase DegT 0.87 AO353_25535 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS10435 aminotransferase DegT 0.41 HSERO_RS10430 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Ralstonia solanacearum PSI07 0.68 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.42 RPSI07_RS17520 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS22430 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.39 QEN71_RS22435 glycosyltransferase
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.41 H281DRAFT_00804 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS11420 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.42 ABZR87_RS11415 glycosyltransferase
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS08930 aminotransferase DegT 0.41 BPHYT_RS08925 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Ralstonia solanacearum GMI1000 0.65 RS_RS06630 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.42 RS_RS06625 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Paraburkholderia graminis OAS925 0.65 ABIE53_002021 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.40 ABIE53_002020 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Ralstonia solanacearum UW163 0.65 UW163_RS13295 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.42 UW163_RS13290 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS15850 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.42 RALBFv3_RS15845 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS30905 aminotransferase DegT 0.42 RR42_RS30910 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.78 Psyr_2690 Glycosyl transferase, family 2 low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.78 Psyr_2690 Glycosyl transferase, family 2 low > 86
Pectobacterium carotovorum WPP14 0.33 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.58 HER17_RS06525 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 75
Rahnella sp. WP5 0.33 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.60 EX31_RS14015 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.88 1
Serratia liquefaciens MT49 0.32 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.65 IAI46_11020 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 86
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_10755 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.24 OKGIIK_01345 Glycosyl transferase family 2 low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.63 GFF1859 Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-) low > 78
Escherichia fergusonii Becca 0.31 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.65 EFB2_01602 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 86
Escherichia coli ECOR27 0.31 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 NOLOHH_14615 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 57
Escherichia coli ECRC62 0.30 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 BNILDI_13530 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Escherichia coli Nissle 1917 0.30 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.65 ECOLIN_RS13130 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Klebsiella michiganensis M5al 0.30 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.64 BWI76_RS26480 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.62 2
Escherichia coli ECOR38 0.30 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.65 HEPCGN_22205 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 85
Escherichia coli ECRC98 0.30 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 JDDGAC_26955 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Escherichia coli ECRC102 0.30 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 NIAGMN_20760 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Escherichia coli BW25113 0.30 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) 0.64 b2254 yfbF undecaprenyl phosphate-L-Ara4FN transferase (NCBI) low > 76
Escherichia coli BL21 0.30 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 0.64 ECD_02180 undecaprenyl phosphate-L-Ara4FN transferase 0.98 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.64 OHPLBJKB_01457 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 73
Escherichia coli ECRC99 0.30 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 KEDOAH_05205 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Escherichia coli ECRC101 0.30 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 OKFHMN_22990 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Escherichia coli ECRC101 0.30 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 MCAODC_14030 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Erwinia tracheiphila SCR3 0.30 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.63 LU632_RS16490 arnC undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.85 2
Enterobacter sp. TBS_079 0.29 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.63 MPMX20_04379 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 85
Enterobacter asburiae PDN3 0.29 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.64 EX28DRAFT_4083 Glycosyltransferases involved in cell wall biogenesis 0.52 28
Pantoea sp. MT58 0.29 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 IAI47_21620 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.47 4
Dickeya dianthicola ME23 0.29 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.63 DZA65_RS22615 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase low > 75
Dickeya dadantii 3937 0.29 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 DDA3937_RS21385 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.48 74
Dickeya dianthicola 67-19 0.29 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.64 HGI48_RS21630 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.70 8
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_01064 perosamine synthetase 0.19 CCNA_02983 polyprenyl-phosphate beta-D-glucosyltransferase low > 67
Caulobacter crescentus NA1000 0.26 CCNA_01064 perosamine synthetase 0.19 CCNA_02983 polyprenyl-phosphate beta-D-glucosyltransferase low > 66
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase 0.22 Pf1N1B4_798 Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-) low > 87
Marinobacter adhaerens HP15 0.25 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family 0.26 HP15_3970 glycosyl transferase, group 2 family protein
Magnetospirillum magneticum AMB-1 0.25 AMB_RS00640 DegT/DnrJ/EryC1/StrS family aminotransferase 0.23 AMB_RS00555 glycosyltransferase
Rhodospirillum rubrum S1H 0.24 Rru_A2746 DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) 0.26 Rru_A1005 Glycosyl transferase, family 2 (NCBI)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS08945 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.22 ABZR88_RS10610 glycosyltransferase family 2 protein
Bacteroides thetaiotaomicron VPI-5482 0.24 BT0612 putative aminotransferase (NCBI ptt file) 0.23 BT4564 putative glycosyltransferase (NCBI ptt file)
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_4370 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.22 PfGW456L13_4787 Bactoprenol glucosyl transferase GtrB (EC 2.4.1.-) low > 87
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS01760 aminotransferase DegT 0.23 CA265_RS03725 glycosyltransferase
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.21 Pf6N2E2_2738 Glycosyltransferase low > 103
Alteromonas macleodii MIT1002 0.23 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.23 MIT1002_01632 hypothetical protein low > 70
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_00280 DegT/DnrJ/EryC1/StrS aminotransferase 0.26 CA264_01495 glycosyltransferase
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.20 Ga0059261_1298 Glycosyltransferases involved in cell wall biogenesis
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS03380 DegT/DnrJ/EryC1/StrS family aminotransferase 0.24 HMPREF1058_RS17200 glycosyltransferase family 2 protein
Phaeobacter inhibens DSM 17395 0.20 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase 0.21 PGA1_c27850 glycosyltransferase low > 62
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS11115 DegT/DnrJ/EryC1/StrS family aminotransferase 0.24 ABI39_RS13200 glycosyltransferase family 2 protein
Bosea sp. OAE506 0.20 ABIE41_RS03045 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.24 ABIE41_RS22495 glycosyltransferase family 2 protein low > 77
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_03400 aminotransferase DegT 0.21 AO356_04470 bactoprenol glucosyl transferase low > 104
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_3862 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.23 Echvi_0903 Glycosyltransferases involved in cell wall biogenesis low > 79
Sinorhizobium meliloti 1021 0.20 SM_b21248 aminotransferase 0.22 SMc02384 glycosyltransferase transmembrane protein low > 103
Parabacteroides merdae CL09T00C40 0.19 HMPREF1078_RS01585 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.23 HMPREF1078_RS10445 glycosyltransferase
Variovorax sp. SCN45 0.19 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.21 GFF6747 Glycosyl transferase, family 2 low > 127
Rhodopseudomonas palustris CGA009 0.19 TX73_020615 DegT/DnrJ/EryC1/StrS family aminotransferase 0.18 TX73_021020 glycosyltransferase family 2 protein
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.3174.1 Aminotransferase 0.19 Xcc-8004.1586.1 Glycosyltransferase low > 74
Rhodanobacter denitrificans MT42 0.18 LRK55_RS04940 DegT/DnrJ/EryC1/StrS family aminotransferase 0.19 LRK55_RS19125 glycosyltransferase family 2 protein low > 63
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase 0.25 ABZR86_RS18915 glycosyltransferase family 2 protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS05160 DegT/DnrJ/EryC1/StrS family aminotransferase 0.19 LRK54_RS09030 glycosyltransferase family 2 protein low > 59
Bacteroides stercoris CC31F 0.16 HMPREF1181_RS14960 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.23 HMPREF1181_RS13300 glycosyltransferase family 2 protein
Castellaniella sp019104865 MT123 0.16 ABCV34_RS12945 DegT/DnrJ/EryC1/StrS family aminotransferase 0.25 ABCV34_RS15205 glycosyltransferase family 2 protein

Not shown: 19 genomes with orthologs for PS417_27245 only; 6 genomes with orthologs for PS417_13790 only