| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Methylophilus sp. DMC18 | 1.0 | GFF1442 | | 2-haloacrylate reductase | 1.0 | GFF2594 | | Multidrug resistance protein MexA | 0.54 | 19 |
| Pseudomonas stutzeri RCH2 | 0.82 | Psest_1434 | | NADPH:quinone reductase and related Zn-dependent oxidoreductases | 0.46 | Psest_0309 | | RND family efflux transporter, MFP subunit | low | > 67 |
| Pseudomonas sp. SVBP6 | 0.82 | COO64_RS15345 | | NAD(P)-dependent alcohol dehydrogenase | 0.47 | COO64_RS26270 | | efflux RND transporter periplasmic adaptor subunit | low | > 93 |
| Pseudomonas putida KT2440 | 0.81 | PP_4760 | | Alcohol dehydrogenase, zinc-containing | 0.47 | PP_1386 | | Probable efflux pump periplasmic linker TtgA | low | > 96 |
| Pseudomonas sp. BP01 | 0.80 | JOY50_RS21860 | | NAD(P)-dependent alcohol dehydrogenase | 0.47 | JOY50_RS14450 | ttgA | toluene efflux RND transporter periplasmic adaptor subunit TtgA | low | > 84 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.75 | Psyr_1153 | | Zinc-containing alcohol dehydrogenase superfamily | 0.48 | Psyr_4007 | | Secretion protein HlyD | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.75 | Psyr_1153 | | Zinc-containing alcohol dehydrogenase superfamily | 0.48 | Psyr_4007 | | Secretion protein HlyD | low | > 86 |
| Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS30075 | | NADPH:quinone oxidoreductase | 0.44 | BPHYT_RS16175 | | hemolysin D | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.58 | ABIE53_005049 | | NADPH:quinone reductase-like Zn-dependent oxidoreductase | 0.43 | ABIE53_003409 | | membrane fusion protein (multidrug efflux system) | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.57 | H281DRAFT_02988 | | NADPH:quinone reductase | 0.44 | H281DRAFT_01000 | | membrane fusion protein, multidrug efflux system | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS21115 | | NAD(P)-dependent alcohol dehydrogenase | 0.43 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.55 | Xcc-8004.1741.1 | | Alcohol dehydrogenase (EC 1.1.1.1) | 0.51 | Xcc-8004.1793.1 | | RND efflux system, membrane fusion protein CmeA | low | > 74 |
| Rhodanobacter sp000427505 FW510-R12 | 0.54 | LRK53_RS05065 | | NAD(P)-dependent alcohol dehydrogenase | 0.32 | LRK53_RS07940 | | efflux RND transporter periplasmic adaptor subunit | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_03255 | | Alcohol dehydrogenase | 0.35 | MIT1002_00134 | | Acriflavine resistance protein A precursor | low | > 70 |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS25355 | | NADPH:quinone oxidoreductase | 0.45 | RR42_RS32415 | | hemolysin D | low | > 128 |
| Pectobacterium carotovorum WPP14 | 0.38 | HER17_RS13680 | | NAD(P)-dependent alcohol dehydrogenase | 0.42 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | low | > 75 |
| Dickeya dianthicola 67-19 | 0.37 | HGI48_RS10030 | | NAD(P)-dependent alcohol dehydrogenase | 0.43 | HGI48_RS05795 | | efflux RND transporter periplasmic adaptor subunit | low | > 71 |
| Ralstonia solanacearum UW163 | 0.34 | UW163_RS22615 | | NAD(P)-dependent alcohol dehydrogenase | 0.51 | UW163_RS19385 | | efflux RND transporter periplasmic adaptor subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS22075 | | NAD(P)-dependent alcohol dehydrogenase | 0.51 | RALBFv3_RS19790 | | efflux RND transporter periplasmic adaptor subunit | low | > 76 |
| Rhodanobacter denitrificans MT42 | 0.34 | LRK55_RS04380 | | NAD(P)-dependent alcohol dehydrogenase | 0.32 | LRK55_RS01870 | | efflux RND transporter periplasmic adaptor subunit | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.34 | LRK54_RS04605 | | NAD(P)-dependent alcohol dehydrogenase | 0.32 | LRK54_RS02095 | | efflux RND transporter periplasmic adaptor subunit | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS10690 | | NAD(P)-dependent alcohol dehydrogenase | 0.49 | ABZR86_RS18280 | | efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Pseudomonas sp. DMC3 | 0.32 | GFF1176 | | Alcohol dehydrogenase | 0.45 | GFF2213 | | putative efflux pump periplasmic linker TtgA | low | > 89 |
| Klebsiella michiganensis M5al | 0.31 | BWI76_RS27960 | | alcohol dehydrogenase protein | 0.43 | BWI76_RS27690 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 92 |
| Serratia liquefaciens MT49 | 0.31 | IAI46_21740 | | NAD(P)-dependent alcohol dehydrogenase | 0.45 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | low | > 86 |
| Rhizobium sp. OAE497 | 0.31 | ABIE40_RS14500 | | NAD(P)-dependent alcohol dehydrogenase | 0.44 | ABIE40_RS24220 | | efflux RND transporter periplasmic adaptor subunit | low | > 107 |
| Enterobacter asburiae PDN3 | 0.30 | EX28DRAFT_3984 | | NADPH:quinone reductase and related Zn-dependent oxidoreductases | 0.42 | EX28DRAFT_2495 | | RND family efflux transporter, MFP subunit | low | > 76 |
| Enterobacter sp. TBS_079 | 0.29 | MPMX20_00006 | | Alcohol dehydrogenase | 0.43 | MPMX20_01065 | | Multidrug efflux pump subunit AcrA | low | > 85 |
| Sinorhizobium meliloti 1021 | 0.29 | SMc01816 | | oxidoreductase | 0.37 | SMc02868 | | multidrug efflux system protein | 0.33 | 21 |
| Variovorax sp. SCN45 | 0.27 | GFF3536 | | Alcohol dehydrogenase (EC 1.1.1.1) | 0.44 | GFF5989 | | RND efflux system, membrane fusion protein | low | > 127 |
| Bosea sp. OAE506 | 0.21 | ABIE41_RS04920 | | zinc-binding dehydrogenase | 0.40 | ABIE41_RS01600 | | efflux RND transporter periplasmic adaptor subunit | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.21 | TX73_004720 | | NAD(P)H-quinone oxidoreductase | 0.44 | TX73_012250 | | efflux RND transporter periplasmic adaptor subunit | low | > 86 |
| Agrobacterium fabrum C58 | 0.20 | Atu1595 | | NADPH:quinone reductase | 0.34 | Atu3203 | | RND multidrug efflux membrane permease | — | — |
| Castellaniella sp019104865 MT123 | 0.20 | ABCV34_RS03770 | | zinc-binding dehydrogenase | 0.31 | ABCV34_RS04230 | | efflux RND transporter periplasmic adaptor subunit | low | > 48 |
| Azospirillum brasilense Sp245 | 0.20 | AZOBR_RS06200 | | NAD(P)H quinone oxidoreductase | 0.45 | AZOBR_RS30180 | | hemolysin D | low | > 97 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.20 | CA264_12940 | | alcohol dehydrogenase | 0.25 | CA264_03650 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Variovorax sp. OAS795 | 0.19 | ABID97_RS20515 | | NAD(P)H-quinone oxidoreductase | 0.39 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | low | > 91 |
| Herbaspirillum seropedicae SmR1 | 0.19 | HSERO_RS08800 | | NAD(P)H quinone oxidoreductase | 0.51 | HSERO_RS23060 | | hemolysin D | low | > 78 |
| Azospirillum sp. SherDot2 | 0.18 | MPMX19_01406 | | Quinone oxidoreductase 1 | 0.47 | MPMX19_05883 | | Multidrug resistance protein MexA | low | > 112 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS20750 | | zinc-binding dehydrogenase | 0.19 | ABZR88_RS03045 | | efflux RND transporter periplasmic adaptor subunit | low | > 71 |
| Pseudomonas fluorescens GW456-L13 | 0.17 | PfGW456L13_888 | | Quinone oxidoreductase (EC 1.6.5.5) | 0.46 | PfGW456L13_4580 | | Multidrug efflux RND membrane fusion protein MexC | low | > 87 |
| Marinobacter adhaerens HP15 | 0.17 | HP15_2545 | | oxidoreductase, zinc-binding dehydrogenase family protein | 0.21 | HP15_932 | | efflux transporter, RND family, MFP subunit | low | > 73 |
| Sphingomonas koreensis DSMZ 15582 | 0.17 | Ga0059261_0998 | | putative NAD(P)H quinone oxidoreductase, PIG3 family | 0.38 | Ga0059261_0560 | | RND family efflux transporter, MFP subunit | low | > 68 |
| Acidovorax sp. GW101-3H11 | 0.17 | Ac3H11_1783 | | Putative Zn-dependent oxidoreductase PA5234 | 0.37 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | low | > 79 |
| Rhodospirillum rubrum S1H | 0.17 | Rru_A1056 | | Zinc-containing alcohol dehydrogenase superfamily (NCBI) | 0.42 | Rru_A2050 | | Secretion protein HlyD (NCBI) | low | > 58 |
| Pseudomonas fluorescens FW300-N1B4 | 0.17 | Pf1N1B4_2221 | | Quinone oxidoreductase (EC 1.6.5.5) | 0.47 | Pf1N1B4_3247 | | Multidrug efflux RND membrane fusion protein MexC | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.17 | Echvi_2949 | | NADPH:quinone reductase and related Zn-dependent oxidoreductases | 0.22 | Echvi_3741 | | RND family efflux transporter, MFP subunit | low | > 79 |
| Pseudomonas fluorescens SBW25 | 0.17 | PFLU_RS28995 | | NADPH:quinone oxidoreductase family protein | 0.48 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.17 | PFLU_RS28995 | | NADPH:quinone oxidoreductase family protein | 0.48 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Pseudomonas sp. S08-1 | 0.16 | OH686_11250 | | Putative Zn-dependent oxidoreductase | 0.47 | OH686_16045 | | Multidrug efflux system, membrane fusion component | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.16 | AO356_12960 | | NADPH:quinone oxidoreductase | 0.47 | AO356_04875 | | antibiotic transporter | low | > 104 |
| Pseudomonas simiae WCS417 | 0.16 | PS417_27340 | | NADPH:quinone oxidoreductase | 0.48 | PS417_06775 | | antibiotic transporter | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.16 | Pf6N2E2_4469 | | Quinone oxidoreductase (EC 1.6.5.5) | 0.48 | Pf6N2E2_221 | | RND efflux system, membrane fusion protein CmeA | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.16 | AO353_08810 | | NADPH:quinone oxidoreductase | 0.45 | AO353_17300 | | antibiotic transporter | low | > 101 |
| Paraburkholderia sabiae LMG 24235 | 0.16 | QEN71_RS24170 | | NAD(P)H-quinone oxidoreductase | 0.46 | QEN71_RS02520 | | efflux RND transporter periplasmic adaptor subunit | low | > 153 |
| Caulobacter crescentus NA1000 Δfur | 0.15 | CCNA_01640 | | quinone oxidoreductase | 0.42 | CCNA_00851 | | periplasmic multidrug efflux lipoprotein precursor | low | > 67 |
| Shewanella sp. ANA-3 | 0.15 | Shewana3_3581 | | response regulator receiver protein (RefSeq) | 0.45 | Shewana3_4046 | | RND family efflux transporter MFP subunit (RefSeq) | low | > 73 |
| Caulobacter crescentus NA1000 | 0.15 | CCNA_01640 | | quinone oxidoreductase | 0.42 | CCNA_00851 | | periplasmic multidrug efflux lipoprotein precursor | low | > 66 |
| Ralstonia solanacearum GMI1000 | 0.15 | RS_RS10960 | | quinone oxidoreductase | 0.50 | RS_RS21035 | | efflux RND transporter periplasmic adaptor subunit | low | > 80 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.14 | A4249_RS08870 | | NAD(P)H-quinone oxidoreductase | 0.21 | A4249_RS09930 | | efflux RND transporter periplasmic adaptor subunit | low | > 48 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.13 | DVU2754 | qor | quinone oxidoreductase (TIGR) | 0.49 | DVU2817 | acrA | multidrug resistance protein (TIGR) | low | > 55 |
| Rhodanobacter sp. FW510-T8 | 0.12 | OKGIIK_07190 | | NAD(P)H-quinone oxidoreductase | 0.34 | OKGIIK_09165 | acrA | efflux transporter periplasmic adaptor subunit | low | > 52 |
| Shewanella oneidensis MR-1 | 0.12 | SO0640 | | alcohol dehydrogenase, zinc-containing (NCBI ptt file) | 0.44 | SO4693 | | multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.11 | Sama_0533 | | alcohol dehydrogenase, zinc-containing (RefSeq) | 0.45 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | low | > 62 |
Not shown: 9 genomes with orthologs for GFF1442 only; 33 genomes with orthologs for GFF2594 only