Conservation of cofitness between Psest_2405 and Psest_2590 in Pseudomonas stutzeri RCH2

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2405 NAD-dependent protein deacetylases, SIR2 family 1.0 Psest_2590 3-isopropylmalate dehydratase, small subunit 0.22 19
Pseudomonas sp. S08-1 0.63 OH686_06015 NAD-dependent protein deacetylase of SIR2 family 0.92 OH686_04475 3-isopropylmalate dehydratase small subunit low > 80
Pseudomonas putida KT2440 0.52 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent 0.84 PP_1986 3-isopropylmalate dehydratase small subunit low > 96
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_23430 NAD-dependent deacetylase 0.84 AO356_21405 3-isopropylmalate dehydratase low > 104
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS10995 NAD-dependent deacylase 0.72 ABZR87_RS14535 3-isopropylmalate dehydratase small subunit low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS18020 NAD-dependent deacylase 0.73 RPSI07_RS14700 3-isopropylmalate dehydratase small subunit
Ralstonia solanacearum GMI1000 0.46 RS_RS06165 NAD-dependent deacylase 0.72 RS_RS09995 3-isopropylmalate dehydratase small subunit
Ralstonia solanacearum UW163 0.46 UW163_RS12820 NAD-dependent deacylase 0.73 UW163_RS11110 3-isopropylmalate dehydratase small subunit
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS15355 NAD-dependent deacylase 0.73 RALBFv3_RS02615 3-isopropylmalate dehydratase small subunit low > 76
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS13055 NAD-dependent protein deacylase 0.69 RR42_RS14390 3-isopropylmalate dehydratase low > 128
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0796 NAD-dependent protein deacetylases, SIR2 family 0.72 B158DRAFT_1320 3-isopropylmalate dehydratase, small subunit low > 40
Mycobacterium tuberculosis H37Rv 0.42 Rv1151c Transcriptional regulatory protein 0.34 Rv2987c Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI)
Acidovorax sp. GW101-3H11 0.40 Ac3H11_4140 NAD-dependent protein deacetylase of SIR2 family 0.66 Ac3H11_1527 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF4837 NAD-dependent protein deacetylase of SIR2 family 0.67 GFF3361 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 90
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_07575 NAD-dependent protein deacylase 0.57 CSW01_12610 3-isopropylmalate dehydratase small subunit low > 62
Azospirillum brasilense Sp245 0.33 AZOBR_RS00620 NAD-dependent deacetylase 0.55 AZOBR_RS14135 isopropylmalate isomerase low > 97
Pantoea sp. MT58 0.32 IAI47_11950 NAD-dependent protein deacylase 0.56 IAI47_16015 3-isopropylmalate dehydratase small subunit low > 76
Shewanella amazonensis SB2B 0.32 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.50 Sama_0338 leuD isopropylmalate isomerase small subunit (RefSeq) 0.53 58
Shewanella sp. ANA-3 0.31 Shewana3_1717 NAD-dependent deacetylase (RefSeq) 0.52 Shewana3_3758 leuD isopropylmalate isomerase small subunit (RefSeq)
Bacteroides ovatus ATCC 8483 0.31 BACOVA_02197 transcriptional regulator, Sir2 family 0.38 BACOVA_04602 3-isopropylmalate dehydratase, small subunit low > 94
Variovorax sp. SCN45 0.31 GFF5049 NAD-dependent protein deacetylase of SIR2 family 0.69 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 127
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_03594 SIR2 family protein 0.45 CCNA_00195 3-isopropylmalate dehydratase small subunit low > 67
Caulobacter crescentus NA1000 0.31 CCNA_03594 SIR2 family protein 0.45 CCNA_00195 3-isopropylmalate dehydratase small subunit low > 66
Shewanella oneidensis MR-1 0.31 SO1938 cobB cobB protein (NCBI ptt file) 0.52 SO4233 leuD 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) low > 76
Bacteroides thetaiotaomicron VPI-5482 0.31 BT2975 putative nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (NCBI ptt file) 0.36 BT1859 3-isopropylmalate dehydratase small subunit (NCBI ptt file) low > 81
Pectobacterium carotovorum WPP14 0.31 HER17_RS08800 NAD-dependent protein deacylase 0.58 HER17_RS03070 3-isopropylmalate dehydratase small subunit low > 75
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS01330 NAD-dependent deacylase 0.38 HMPREF1181_RS14140 3-isopropylmalate dehydratase small subunit low > 56
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS12815 NAD-dependent deacylase 0.37 HMPREF1078_RS16655 3-isopropylmalate dehydratase small subunit low > 61
Azospirillum sp. SherDot2 0.30 MPMX19_02648 NAD-dependent protein deacylase 0.56 MPMX19_00606 3-isopropylmalate dehydratase small subunit 1 low > 112
Alteromonas macleodii MIT1002 0.30 MIT1002_02145 NAD-dependent protein deacylase 0.49 MIT1002_00946 3-isopropylmalate dehydratase small subunit 1 low > 70
Rhodospirillum rubrum S1H 0.30 Rru_A3645 Silent information regulator protein Sir2 (NCBI) 0.55 Rru_A1190 3-isopropylmalate dehydratase small subunit region (NCBI) low > 58
Escherichia coli ECRC101 0.30 MCAODC_22800 cobB NAD-dependent protein deacylase 0.57 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli BL21 0.30 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 0.58 ECD_00073 3-isopropylmalate dehydratase small subunit low > 60
Escherichia coli ECOR27 0.30 NOLOHH_20965 cobB NAD-dependent protein deacylase 0.58 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC102 0.30 NIAGMN_24390 cobB NAD-dependent protein deacylase 0.57 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC98 0.30 JDDGAC_07100 cobB NAD-dependent protein deacylase 0.57 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC101 0.30 OKFHMN_03440 cobB NAD-dependent protein deacylase 0.57 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli BW25113 0.30 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 0.58 b0071 leuD isopropylmalate isomerase small subunit (NCBI) low > 76
Escherichia coli ECRC62 0.30 BNILDI_19130 cobB NAD-dependent protein deacylase 0.58 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECOR38 0.30 HEPCGN_24045 cobB NAD-dependent protein deacylase 0.57 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_02546 NAD-dependent protein deacylase 0.58 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit 0.40 32
Rahnella sp. WP5 0.30 EX31_RS24540 NAD-dependent protein deacylase 0.59 EX31_RS03695 3-isopropylmalate dehydratase small subunit low > 89
Shewanella loihica PV-4 0.30 Shew_1662 NAD-dependent deacetylase (RefSeq) 0.54 Shew_3469 isopropylmalate isomerase small subunit (RefSeq) low > 60
Escherichia coli ECRC99 0.30 KEDOAH_24315 cobB NAD-dependent protein deacylase 0.57 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS12545 NAD-dependent deacylase 0.37 HMPREF1058_RS14555 3-isopropylmalate dehydratase small subunit low > 67
Escherichia fergusonii Becca 0.30 EFB2_02855 NAD-dependent protein deacylase 0.57 EFB2_03974 3-isopropylmalate dehydratase small subunit low > 86
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS04165 NAD-dependent deacylase 0.37 ABI39_RS10205 3-isopropylmalate dehydratase small subunit low > 72
Escherichia coli Nissle 1917 0.30 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 0.57 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3403 NAD-dependent protein deacetylase of SIR2 family 0.59 GFF167 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 78
Marinobacter adhaerens HP15 0.29 HP15_2552 silent information regulator protein Sir2 0.75 HP15_1833 isopropylmalate isomerase small subunit low > 73
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_3134 NAD-dependent protein deacetylases, SIR2 family 0.36 Echvi_2060 3-isopropylmalate dehydratase, small subunit
Acinetobacter radioresistens SK82 0.29 MPMX26_01708 NAD-dependent protein deacylase 0.73 MPMX26_00346 3-isopropylmalate dehydratase small subunit 1
Dickeya dianthicola ME23 0.28 DZA65_RS13510 NAD-dependent protein deacylase 0.59 DZA65_RS19215 3-isopropylmalate dehydratase small subunit low > 75
Magnetospirillum magneticum AMB-1 0.28 AMB_RS04415 NAD-dependent protein deacylase 0.57 AMB_RS20565 3-isopropylmalate dehydratase small subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS00415 NAD-dependent deacylase 0.33 A4249_RS10000 3-isopropylmalate dehydratase small subunit low > 48
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_1943 NAD-dependent protein deacetylases, SIR2 family 0.37 Ga0059261_4225 3-isopropylmalate dehydratase, small subunit low > 68
Dickeya dadantii 3937 0.28 DDA3937_RS12975 NAD-dependent protein deacylase 0.59 DDA3937_RS18130 3-isopropylmalate dehydratase small subunit low > 74
Dinoroseobacter shibae DFL-12 0.27 Dshi_2612 Silent information regulator protein Sir2 (RefSeq) 0.56 Dshi_0083 3-isopropylmalate dehydratase, small subunit (RefSeq) low > 64
Dickeya dianthicola 67-19 0.27 HGI48_RS13045 NAD-dependent protein deacylase 0.59 HGI48_RS18070 3-isopropylmalate dehydratase small subunit low > 71
Erwinia tracheiphila SCR3 0.27 LU632_RS14640 cobB NAD-dependent protein deacylase 0.52 LU632_RS02865 leuD 3-isopropylmalate dehydratase small subunit low > 74
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family 0.84 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 103
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS18330 NAD-dependent deacetylase 0.68 HSERO_RS16505 3-isopropylmalate dehydratase small subunit low > 78
Pseudomonas simiae WCS417 0.23 PS417_10540 NAD-dependent deacetylase 0.85 PS417_18595 3-isopropylmalate dehydratase low > 88
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS05345 NAD-dependent protein deacetylase 0.37 ABZR86_RS15955 3-isopropylmalate dehydratase small subunit low > 74
Lysobacter sp. OAE881 0.22 ABIE51_RS09130 NAD-dependent protein deacetylase 0.39 ABIE51_RS17580 3-isopropylmalate dehydratase small subunit low > 62
Bosea sp. OAE506 0.22 ABIE41_RS14930 Sir2 family NAD-dependent protein deacetylase 0.51 ABIE41_RS11640 3-isopropylmalate dehydratase small subunit
Pseudomonas fluorescens SBW25 0.22 PFLU_RS10600 NAD-dependent protein deacetylase 0.84 PFLU_RS20575 3-isopropylmalate dehydratase small subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS10600 NAD-dependent protein deacetylase 0.84 PFLU_RS20575 3-isopropylmalate dehydratase small subunit low > 109
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_08275 NAD-dependent protein deacetylase 0.35 OKGIIK_13590 leuD 3-isopropylmalate dehydratase small subunit low > 52
Rhodopseudomonas palustris CGA009 0.22 TX73_013035 NAD-dependent protein deacetylase 0.52 TX73_001215 3-isopropylmalate dehydratase small subunit
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS16480 NAD-dependent protein deacetylase 0.47 LRK54_RS07370 3-isopropylmalate dehydratase small subunit low > 59
Rhodanobacter denitrificans MT42 0.21 LRK55_RS16230 NAD-dependent protein deacetylase 0.48 LRK55_RS07100 3-isopropylmalate dehydratase small subunit low > 63
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS20510 NAD-dependent protein deacetylase 0.70 QEN71_RS17615 3-isopropylmalate dehydratase small subunit low > 153
Bifidobacterium breve UCC2003 0.21 BBR_RS20125 SIR2 family protein 0.36 BBR_RS19625 3-isopropylmalate dehydratase small subunit low > 34
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_26795 NAD-dependent deacetylase 0.85 AO353_20625 3-isopropylmalate dehydratase low > 101

Not shown: 1 genomes with orthologs for Psest_2405 only; 23 genomes with orthologs for Psest_2590 only